Mammals Genomes assembly hubs, assembly statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of mammals only.

See also: hub accesstrack statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser
scientific name
and data download
NCBI assembly sequence
count
genome size
nucleotides
gap
count
unknown bases
(gap size sum)
masking
percent
1 aardvark (SDZICR_OR568_19922 2012 Broad) Orycteropus afer afer GCF_000298275.1_OryAfe1.0 22,509 4,444,080,527 411,144 1,028,739,906 39.08
2 African grass rat (maternal 2020) Arvicanthis niloticus GCA_011750645.1_mArvNil1.mat 1,610 2,486,141,644 1,526 27,535,453 37.17
3 African grass rat (paternal 2020) Arvicanthis niloticus GCA_011762545.1_mArvNil1.pat 1,740 2,517,706,780 1,563 57,877,291 36.53
4 African grass rat (paternal X 2020 refseq) Arvicanthis niloticus GCF_011762505.1_mArvNil1.pat.X 1,595 2,496,761,438 1,624 20,289,527 37.17
5 African grass rat (v2 paternal X 2024 genbank) Arvicanthis niloticus GCA_011762505.2_mArvNil1.pat.X 1,596 2,496,777,707 1,624 20,289,527 42.62
6 African grass rat (v3 paternal hap 2024) Arvicanthis niloticus GCA_011762505.3_mArvNil1.pat.X 1,596 2,496,777,707 1,624 20,289,527 33.78
7 African hunting dog Lycaon pictus GCA_001887905.1_LycPicSAfr1.0 803 2,358,143,818 1,415,298 171,699,382 37.12
8 African hunting dog (LycPic1hap1 2024) Lycaon pictus GCA_040955645.1_LycPic1.final.hap1 85 2,260,356,192 82 8,200 32.97
9 African hunting dog (LycPic1hap2 2024) Lycaon pictus GCA_040955705.1_LycPic1.final.hap2 76 2,384,012,108 91 9,100 33.73
10 African savanna elephant (2009 refseq) Loxodonta africana GCF_000001905.1_Loxafr3.0 2,352 3,196,738,102 93,514 78,195,493 56.15
11 African savanna elephant (hap1 mLoxAfr1 2023) Loxodonta africana GCA_030020305.1_mLoxAfr1.hap1 1,084 3,575,747,632 169 5,227,145 50.50
12 African savanna elephant (hap2 2023 genbank) Loxodonta africana GCA_030014295.1_mLoxAfr1.hap2 880 3,540,893,228 231 3,688,568 49.48
13 African savanna elephant (hap2 2023 refseq) Loxodonta africana GCF_030014295.1_mLoxAfr1.hap2 879 3,540,876,381 231 3,688,568 49.48
14 agile gracile mouse opossum Gracilinanus agilis GCF_016433145.1_AgileGrace 60,714 3,701,033,721 85,142 305,455,367 45.04
15 alpaca (v3.2 Carlotta AHFN-0088 2019 Deakin U) Vicugna pacos GCF_000164845.4_VicPac3.2 77,389 2,118,870,233 166,272 88,415,415 31.82
16 Alpine marmot (2019) Marmota marmota marmota GCF_001458135.2_marMar 14,031 2,506,852,125 88,858 97,149,795 30.32
17 Alvarez's mastiff bat (A012 2023) Molossus alvarezi GCA_031001765.1_BBF_mMolAlv_v1 187 2,395,140,990 1,182 236,400 38.99
18 Alvarez's mastiff bat (hap1 2024) Molossus alvarezi GCA_037157525.1_mMolAlv2.hap1 326 2,478,684,717 80 12,700 40.83
19 Alvarez's mastiff bat (hap2 2024) Molossus alvarezi GCA_037176705.1_mMolAlv2.hap2 287 2,504,806,577 75 11,900 41.09
20 Amazon manatee (hap1 2025) Trichechus inunguis GCA_046562985.1_mTriInu1_haplotype_1 550 3,071,794,592 377 75,400 56.95
21 Amazon manatee (hap2 2025) Trichechus inunguis GCA_046562895.1_mTriInu1_haplotype_2 401 3,320,339,069 294 58,800 57.34
22 American beaver (Ward 2017 refseq) Castor canadensis GCF_001984765.1_C.can_genome_v1.0 21,157 2,518,306,565 3,321 331,911 33.78
23 American beaver (hap1 2025) Castor canadensis GCA_047511655.1_mCasCan1.hap1 502 2,828,089,101 181 36,200 35.39
24 American beaver (hap2 2025) Castor canadensis GCA_047511605.1_mCasCan1.hap2 228 2,764,863,784 194 38,800 35.89
25 American bison (2014 refseq) Bison bison bison GCF_000754665.1_Bison_UMD1.0 128,431 2,828,031,685 341,984 195,767,988 37.67
26 American black bear (L20-20 alternate hap 2022) Ursus americanus GCA_024610745.1_mUrsAme1.0.a 77,311 2,885,111,784 0 0 35.68
27 American black bear (L20-20 primary hap 2022) Ursus americanus GCA_024610735.1_mUrsAme1.0.p 317 2,524,264,886 22 2,200 35.55
28 American black bear (UA15103 2021) Ursus americanus GCF_020975775.1_gsc_jax_bbear_1.0 2,213 2,351,964,450 0 0 34.58
29 American mink (2018) Neogale vison GCA_900108605.1_NNQGG.v01 7,175 2,447,189,291 154,172 173,024,279 36.01
30 American mink (hap1 2024) Neogale vison GCA_964106545.1_mNeoVis2.hap1.1 435 2,697,147,479 2,957 591,400 38.00
31 American mink (hap2 2024) Neogale vison GCA_964106205.1_mNeoVis2.hap2.1 351 2,662,777,898 2,849 569,815 37.60
32 American mink (M4711 2021 Dalhousie U) Neogale vison GCF_020171115.1_ASM_NN_V1 183 2,681,215,271 0 0 39.20
33 American pika (hap1 2023) Ochotona princeps GCF_030435755.1_mOchPri1.hap1 5,864 2,555,444,530 432 86,229 43.65
34 American pika (hap2 2023) Ochotona princeps GCA_030435715.1_mOchPri1.hap2 6,117 2,534,779,560 375 74,504 45.99
35 American pika 3.0 (2012 Broad refseq) Ochotona princeps GCF_000292845.1_OchPri3.0 10,420 2,229,835,716 122,542 285,847,846 26.73
36 American pika 4.0 (UAM:Mamm:113957 2020) Ochotona princeps GCF_014633375.1_OchPri4.0 9,351 2,231,492,728 124,941 287,505,412 26.71
37 American wolverine (FN33715 2022) Gulo gulo luscus GCA_024509225.1_Gulo_gulo_luscus_F-V1.0 705 2,388,198,349 53 5,300 33.07
38 Amur tiger (TaeGuk 2013 refseq) Panthera tigris altaica GCF_000464555.1_PanTig1.0 1,479 2,391,082,183 155,553 58,232,500 31.80
39 Angolan free-tailed bat (Cote d'Ivoire 20210831_DDa 2024) Mops condylurus GCA_043748645.1_ASM4374864v1 38 2,209,024,231 88 39,320 36.04
40 Antarctic minke whale Balaenoptera bonaerensis GCA_000978805.1_ASM97880v1 421,444 2,234,641,557 299,456 14,335,434 40.90
41 Antillean ghost-faced bat Mormoops blainvillei GCA_004026545.1_MorMeg_v1_BIUU 205,259 2,111,750,309 1,835 183,500 30.69
42 aoudad Ammotragus lervia GCA_002201775.1_ALER1.0 77,320 2,650,836,958 186,672 107,459,073 43.25
43 Arabian camel (Drom800 2019 refseq) Camelus dromedarius GCF_000803125.2_CamDro3 21,070 2,169,363,382 47,342 17,043,352 33.83
44 Arabian camel (hap2 2024) Camelus dromedarius GCA_036321565.1_mCamDro1.hap2 173 2,086,495,379 210 42,000 31.48
45 Arabian camel (paternal hap 2024 genbank) Camelus dromedarius GCA_036321535.1_mCamDro1.pat 172 2,306,619,778 195 39,000 33.51
46 Arabian camel (paternal hap 2024 refseq) Camelus dromedarius GCF_036321535.1_mCamDro1.pat 171 2,306,603,094 195 39,000 33.51
47 Arctic fox (Blue_001 2021 refseq) Vulpes lagopus GCF_018345385.1_ASM1834538v1 929 2,345,550,353 529 52,702 41.30
48 Arctic ground squirrel (AGS 11-09-20 2018) Urocitellus parryii GCF_003426925.1_ASM342692v1 15,883 2,520,500,478 2,429,461 267,022,442 29.24
49 Arctic ground squirrel (hap1 2024) Urocitellus parryii GCA_045843805.1_mUroPar1.hap1 2,530 2,935,792,869 694 127,900 36.47
50 Arctic ground squirrel (hap2 2024) Urocitellus parryii GCA_045843765.1_mUroPar1.hap2 2,307 2,750,197,790 590 110,400 35.97
51 Asian palm civet Paradoxurus hermaphroditus GCA_004024585.1_ParHer_v1_BIUU 438,125 2,477,229,103 4,533 453,300 40.35
52 Asiatic elephant (mEleMax1 alternate hap 2022) Elephas maximus indicus GCA_024166345.1_mEleMax1_alternate_haplotype 6,361 2,952,809,375 0 0 47.31
53 Asiatic elephant (mEleMax1 primary hap 2022) Elephas maximus indicus GCF_024166365.1_mEleMax1_primary_haplotype 64 3,401,247,148 126 3,333,681 48.67
54 Asiatic mouflon (Amuf_v1 2020) Ovis orientalis GCA_014523465.1_CAU_Oori_1.0 128 2,652,567,896 257 8,408,400 47.04
55 Asiatic tapir (hap1 2023) Tapirus indicus GCA_031878655.1_mTapInd1.hap1 259 2,498,393,425 79 15,800 38.08
56 Asiatic tapir (hap2 2023) Tapirus indicus GCA_031878705.1_mTapInd1.hap2 193 2,477,445,429 92 18,400 38.23
57 ass (Dezhou 2021) Equus asinus GCF_016077325.2_ASM1607732v2 50 2,431,907,375 1,922 3,529,454 41.54
58 ass (Donkey D_3611 2024) Equus asinus GCF_041296235.1_EquAss-T2T_v2 849 2,797,772,842 7 1,789,607 38.38
59 ass (Maral har 2015 refseq) Equus asinus GCF_001305755.1_ASM130575v1 2,167 2,391,051,217 69,593 33,114,414 40.30
60 Atlantic white-sided dolphin (mLagAcu1.hap1.1 2024) Leucopleurus acutus GCA_964270905.1_mLagAcu1.hap1.1 899 2,676,209,414 1,034 206,800 41.93
61 Atlantic white-sided dolphin (mLagAcu1.hap2.1 2024) Leucopleurus acutus GCA_964270935.1_mLagAcu1.hap2.1 879 2,422,718,875 917 183,400 39.19
62 Australian echidna (mTacAcu1 alternate hap 2020) Tachyglossus aculeatus GCA_015852515.1_mTacAcu1.alt 3,482 1,885,160,879 26 440,103 56.70
63 Australian echidna (mTacAcu1 primary hap 2020) Tachyglossus aculeatus GCF_015852505.1_mTacAcu1.pri 310 2,213,004,214 524 30,817,383 55.70
64 Bactrian camel (Alxa 2014 refseq) Camelus bactrianus GCF_000767855.1_Ca_bactrianus_MBC_1.0 35,455 1,992,663,268 31,980 13,666,687 33.85
65 banded mongoose Mungos mungo GCA_004023785.1_MunMun_v1_BIUU 312,364 2,448,211,634 4,510 451,000 40.54
66 bank vole Myodes glareolus GCF_902806735.1_Bank_vole1_10x 636 2,323,059,002 53,506 32,329,500 31.51
67 banner-tailed kangaroo rat Dipodomys spectabilis GCF_019054845.1_ASM1905484v1 2,026 2,844,766,008 0 0 48.77
68 banteng 2023 Bos javanicus GCF_032452875.1_ARS-OSU_banteng_1.0 1,518 2,972,811,588 84 8,400 47.37
69 bat A.intermedius (hap2 2024) Artibeus intermedius GCA_038363225.1_mArtInt1.hap2 187 2,080,478,059 56 8,700 33.53
70 bat H.larvatus (China 20210929_DDb primary hap 2024) Hipposideros larvatus GCA_043727955.1_ASM4372795v1 250 2,380,748,055 190 72,362 39.02
71 beluga whale (Cook Inlet, Alaska, USA DL-CIB17-05 2020) Delphinapterus leucas GCA_009917745.1_GSC_cook_1.0 25,811 2,389,559,792 27,070 58,030,126 42.50
72 beluga whale (GAN/ISIS: 26980492/103006 v3 2019) Delphinapterus leucas GCF_002288925.2_ASM228892v3 5,905 2,362,774,659 24,414 35,865,177 43.09
73 big brown bat (BU_THK_EF1 2012) Eptesicus fuscus GCF_000308155.1_EptFus1.0 6,788 2,026,627,185 160,269 215,248,386 28.91
74 big brown bat (TK198812 2023) Eptesicus fuscus GCF_027574615.1_DD_ASM_mEF_20220401 48 2,008,057,866 75 28,557 37.06
75 bighorn sheep (v2 Bighorn MfBH-ARS-UI-01 2024) Ovis canadensis GCF_042477335.2_ARS-UI_OviCan_v2 42 2,974,283,533 3 300 46.87
76 bighorn sheep (BS48 2019) Ovis canadensis GCA_004026945.1_OviCan_v1_BIUU 1,048,136 2,863,658,823 9,412 941,200 50.76
77 bilby (mMagLag1 2024) Macrotis lagotis GCA_037893015.1_bilby.v1.9.chrom.fasta 609 3,655,732,635 4,431 12,523,912 43.71
78 black and rufous elephant shrew (mRhyPet1hap1 2024) Rhynchocyon petersi GCA_043290085.1_mRhyPet1.hap1 469 5,620,370,870 770 153,831 71.76
79 black and rufous elephant shrew (mRhyPet1hap2 2024) Rhynchocyon petersi GCA_043290065.1_mRhyPet1.hap2 314 5,331,151,070 723 144,425 64.54
80 black flying fox Pteropus alecto GCF_000325575.1_ASM32557v1 65,598 1,985,975,446 104,566 41,333,505 33.38
81 black rat Rattus rattus GCF_011064425.1_Rrattus_CSIRO_v1 2,173 2,382,787,281 6,158 553,563 41.70
82 black rhinoceros (alternate hap 2021) Diceros bicornis minor GCA_020826835.1_mDicBic1.pat.decon 1,199 3,044,793,931 178 903,692 40.41
83 black rhinoceros (BS38 2019 Broad) Diceros bicornis GCA_004027315.1_DicBicMic_v1_BIUU 2,022,658 3,020,704,222 7,256 725,600 40.33
84 black rhinoceros (primary hap 2021 refseq) Diceros bicornis minor GCF_020826845.1_mDicBic1.mat.cur 1,076 3,005,535,620 215 1,368,861 40.15
85 black-footed cat Felis nigripes GCA_004023925.1_FelNig_v1_BIUU 590,124 2,428,424,918 13,476 1,347,600 44.13
86 black-footed ferret (SB6536 2022) Mustela nigripes GCF_022355385.1_MUSNIG.SB6536 20,575 2,498,549,507 33,042 82,348,172 32.10
87 black-lipped pika Ochotona curzoniae GCF_017591425.1_NIBS_Ocur_1.0 2,214 2,086,129,077 54 6,809 31.29
88 Blainville's beaked whale (alternate hap 2022) Mesoplodon densirostris GCA_025094165.1_mMesDen1_alternate_haplotype 5,197 2,376,281,363 1 33 41.16
89 Blainville's beaked whale (primary hap 2022 refseq) Mesoplodon densirostris GCF_025265405.1_mMesDen1_primary_haplotype 74 2,683,391,478 97 700,303 41.79
90 blue whale (alternate hap JJ_BM4_2016_0621 2019) Balaenoptera musculus GCA_008658375.1_mBalMus1_alternate 12,574 1,876,085,767 0 0 43.51
91 Blue whale (JJ_BM4_2016_0621 v2 alternate hap 2020) Balaenoptera musculus GCA_008658375.2_mBalMus1.alt.v2 10,996 1,835,388,607 3 90 43.53
92 blue whale (JJ_BM4_2016_0621 v3 primary hap 2020) Balaenoptera musculus GCF_009873245.2_mBalMus1.pri.v3 106 2,374,868,943 886 25,937,142 43.76
93 bobcat (Redwood Valley CCGP_SWC_20201006 alternate hap 2022) Lynx rufus GCA_022079275.1_mLynRuf1.a 68,111 3,320,153,114 4,716 471,601 33.84
94 bobcat (Redwood Valley CCGP_SWC_20201006 primary hap 2022) Lynx rufus GCF_022079265.1_mLynRuf1.p 75 2,439,239,374 24 2,405 43.33
95 boreal woodland reindeer (boreal CA-31 2023) Rangifer tarandus caribou GCA_019903745.2_ULRtarCaribou_2v2 12,266 2,577,110,347 34,682 77,970,589 36.44
96 Botta's pocket gopher (bottae MVZ:Mamm:240275 alternate hap 2022) Thomomys bottae GCA_024803775.1_mThoBot1.0.a 3,340 3,469,049,410 124 12,400 61.87
97 Botta's pocket gopher (bottae MVZ:Mamm:240275 primary hap 2022) Thomomys bottae GCA_024803745.1_mThoBot1.0.p 2,792 2,845,630,888 106 10,600 57.15
98 Botta's pocket gopher (hap1 2023) Thomomys bottae GCA_031878675.1_mThoBot2.hap1 630 2,025,650,949 775 154,825 40.80
99 Botta's pocket gopher (hap2 2023) Thomomys bottae GCA_031878665.1_mThoBot2.hap2 340 1,879,249,320 541 108,200 39.22
100 boutu (hap1 2024) Inia geoffrensis GCA_036417435.1_mIniGeo1.hap1 903 2,749,362,370 284 56,265 42.66
101 boutu (hap2 2024) Inia geoffrensis GCA_036417475.1_mIniGeo1.hap2 800 2,540,437,634 240 47,643 41.43
102 Brandt's bat Myotis brandtii GCF_000412655.1_ASM41265v1 169,750 2,107,242,811 155,664 125,473,085 31.07
103 Brazilian free-tailed bat (primary hap 2023) Tadarida brasiliensis GCA_030848825.1_DD_mTadBra1_pri 148 2,283,188,801 20 5,952 36.16
104 Brazilian guinea pig Cavia aperea GCA_000688575.1_CavAp1.0 3,131 2,716,396,567 2,565,595 967,255,733 21.06
105 Brazilian tapir Tapirus terrestris GCA_004025025.1_TapTer_v1_BIUU 803,506 2,571,458,752 2,273 227,300 38.38
106 brown bear (GAN/ISIS:MIG12 v2 2018) Ursus arctos horribilis GCF_003584765.2_ASM358476v2 6,261 2,327,457,412 17,380 16,213,257 40.61
107 brown bear (v2.0 North America Adak 2023) Ursus arctos GCF_023065955.2_UrsArc2.0 362 2,423,418,479 250 50,000 33.27
108 brown big-eared bat (primary hap 2023) Plecotus auritus GCA_963455305.1_mPleAur1.1 65 2,163,221,563 1,237 247,441 39.67
109 brown-throated sloth Bradypus variegatus GCA_004027775.1_BraVar_v1_BIUU 1,771,805 1,502,475,299 462 46,200 37.97
110 cactus mouse (2023) Peromyscus eremicus GCF_949786415.1_PerEre_H2_v1 4,297 2,916,563,079 2,603 520,600 52.77
111 California mouse (IS 2022) Peromyscus californicus insignis GCF_007827085.1_ASM782708v3 237 2,467,923,528 547 122,718 45.11
112 California sea lion (alternate hap 2019) Zalophus californianus GCA_009762295.1_mZalCal1.alt 3,093 1,970,798,971 0 0 42.94
113 California sea lion (LMU 2018 refseq) Zalophus californianus GCF_900631625.1_zalCal2.2 10,423 2,372,369,564 47,716 4,767,684 43.23
114 California sea lion (mZalCal1 alternate hap 2020) Zalophus californianus GCA_009762295.2_mZalCal1.alt.v2 3,096 1,970,935,876 0 0 42.95
115 California sea lion (v2 primary hap 2020) Zalophus californianus GCF_009762305.2_mZalCal1.pri.v2 47 2,409,685,272 185 18,537,776 43.36
116 California vole (kernensis MVZ Mamm 240107 alternate hap 2023) Microtus californicus GCA_028537755.1_mMicCal1.0.hap2 310 2,142,917,481 43 4,300 33.13
117 California vole (kernensis MVZ Mamm 240107 primary hap 2023) Microtus californicus GCA_028537955.1_mMicCal1.0.hap1 350 2,299,490,594 51 5,100 42.37
118 Canada lynx (alternate hap LIC74 2019) Lynx canadensis GCA_007474575.1_mLynCan4_v1.alt 15,033 1,415,234,291 3 143 43.55
119 Canada lynx (LIC74 v2 alternate hap 2020) Lynx canadensis GCA_007474575.2_mLynCan4.alt.v2 15,041 1,416,309,019 5 743 43.55
120 Canada lynx (LIC74 v2 primary hap 2020) Lynx canadensis GCF_007474595.2_mLynCan4.pri.v2 54 2,407,810,255 842 2,779,346 43.72
121 Cantor's roundleaf bat Hipposideros galeritus GCA_004027415.1_HipGal_v1_BIUU 840,200 2,440,750,851 6,366 636,600 33.46
122 Cape elephant shrew Elephantulus edwardii GCF_000299155.1_EleEdw1.0 8,768 3,843,982,861 279,394 528,111,014 42.36
123 Cape golden mole (2012 Broad) Chrysochloris asiatica GCF_000296735.1_ChrAsi1.0 20,500 4,210,110,458 370,844 846,546,142 41.19
124 Cape rock hyrax (Dallas Zoo Isis #01D731 2014) Procavia capensis GCA_000152225.2_Pcap_2.0 65,694 3,602,182,911 259,879 401,166,617 46.16
125 Cape rock hyrax (US060 2019 Broad) Procavia capensis GCA_004026925.1_ProCapCap_v1_BIUU 1,044,737 3,684,048,458 4,203 420,300 54.49
126 capybara Hydrochoerus hydrochaeris GCA_004027455.1_HydHyd_v1_BIUU 655,342 2,734,590,088 5,747 574,700 35.17
127 carabao (swamp buffalo K-KA32 2023) Bubalus kerabau GCF_029407905.1_PCC_UOA_SB_1v2 115 2,898,492,518 21 4,200 45.23
128 cattle (Hereford L1 Dominette 01449 42190680 v2.0 2023 USDA) Bos taurus GCF_002263795.3_ARS-UCD2.0 1,958 2,770,686,120 386 28,162 42.12
129 cattle (Hereford UMD_3.1.1 2014) Bos taurus GCF_000003055.6_Bos_taurus_UMD_3.1.1 3,144 2,670,139,648 74,464 20,740,269 48.66
130 Chacoan peccary (BS20 v2 2019 Broad) Catagonus wagneri GCA_004024745.2_CatWag_v2_BIUU_UCD 1,183,730 2,640,067,814 57,013 47,532,400 42.56
131 cheetah (Ajub_Pintada_27869175 2022) Acinonyx jubatus GCF_027475565.1_VMU_Ajub_asm_v1.0 195 2,377,417,351 22 4,400 35.16
132 cheetah (Rico 2018) Acinonyx jubatus GCF_003709585.1_Aci_jub_2 3,220 2,384,851,327 24,173 10,703,252 42.70
133 Chinese forest musk deer (Sichuan 2022) Moschus berezovskii GCF_022376915.1_ASM2237691v1 2,446 2,813,371,744 1,781 809,203 43.80
134 Chinese hamster (17A/GY CHO 2020) Cricetulus griseus GCF_003668045.3_CriGri-PICRH-1.0 647 2,366,634,374 4,164 2,425,904 33.79
135 Chinese hamster (CHO v1 2011 BGI) Cricetulus griseus GCF_000223135.1_CriGri_1.0 109,152 2,399,786,748 156,635 81,654,506 31.97
136 Chinese hamster (CHO v2 2017 Eagle Genomics Ltd) Cricetulus griseus GCA_900186095.1_CHOK1S_HZDv1 8,264 2,358,151,106 63,334 34,242,448 33.24
137 Chinese hamster (CHO-K1 CHOZN v2.4 2022) Cricetulus griseus GCA_026545065.1_CHOZN_v2.4 311,581 3,241,143,680 924,541 937,567,500 22.05
138 Chinese pangolin (2020 Yunnan U) Manis pentadactyla GCF_014570555.1_YNU_ManPten_2.0 4,694 2,399,660,488 34,903 107,236,753 34.03
139 Chinese pangolin (hap1 2023) Manis pentadactyla GCF_030020395.1_mManPen7.hap1 661 2,840,164,579 383 6,563,020 39.02
140 Chinese pangolin (hap2 mManPen7 2023) Manis pentadactyla GCA_030020945.1_mManPen7.hap2 700 2,869,287,698 190 14,873,332 39.52
141 Chinese pangolin (MPE899 2014 WashU) Manis pentadactyla GCA_000738955.1_M_pentadactyla-1.1.1 92,769 2,204,724,663 257,424 205,794,437 31.28
142 Chinese rufous horseshoe bat Rhinolophus sinicus GCA_001888835.1_ASM188883v1 63,439 2,073,344,508 212,601 58,156,114 32.94
143 Chinese rufous horseshoe bat (RSC01 2024) Rhinolophus sinicus GCA_036562045.1_ASM3656204v1 454 2,036,377,185 286 28,600 33.14
144 Chinese tree shrew Tupaia chinensis GCF_000334495.1_TupChi_1.0 50,750 2,846,580,235 191,695 140,191,100 38.05
145 chiru Pantholops hodgsonii GCA_000400835.1_PHO1.0 15,058 2,696,869,832 283,069 188,899,892 40.51
146 clouded leopard (mNeoNeb1 alternate hap 2023) Neofelis nebulosa GCA_028018655.1_mNeoNeb1.alt 10,377 1,980,212,524 0 0 33.41
147 clouded leopard (mNeoNeb1 primary hap 2023 refseq) Neofelis nebulosa GCF_028018385.1_mNeoNeb1.pri 33 2,468,345,093 181 1,363,852 34.87
148 common bottlenose dolphin (maternal 2020) Tursiops truncatus GCA_011762535.1_mTurTru1.mat 985 2,385,753,970 649 6,418,241 46.07
149 common bottlenose dolphin (maternal Y refseq 2020) Tursiops truncatus GCF_011762595.1_mTurTru1.mat.Y 362 2,378,522,213 674 6,222,516 46.09
150 common bottlenose dolphin (MMES2002162SC 2016 refseq) Tursiops truncatus GCF_001922835.1_NIST_Tur_tru_v1 2,648 2,132,516,271 114,003 12,216,051 43.67
151 common bottlenose dolphin (paternal 2020) Tursiops truncatus GCA_011762515.1_mTurTru1.pat 1,166 2,378,995,196 868 45,794,633 45.09
152 common brushtail (alternate hap 2020) Trichosurus vulpecula GCA_011100645.1_mTriVul1.alt 12,133 2,591,928,569 313 24,688 40.15
153 common brushtail (refseq 2020) Trichosurus vulpecula GCF_011100635.1_mTriVul1.pri 212 3,359,347,707 1,796 18,696,463 40.57
154 common pipistrelle (2020) Pipistrellus pipistrellus GCA_903992545.1_mPipPip1.1 323 1,763,439,233 1,546 469,367 34.71
155 common pipistrelle (alternate hap 2020) Pipistrellus pipistrellus GCA_903992515.1_mPipPip1.1_alternate_haplotype 10,447 1,579,816,813 12 2,732 33.96
156 common pipistrelle (Broad 2019) Pipistrellus pipistrellus GCA_004026625.1_PipPip_v1_BIUU 726,104 2,090,670,443 10,870 1,087,000 37.98
157 common pipistrelle (hap1.1 2025) Pipistrellus pipistrellus GCA_965203405.1_mPipPip2.hap1.1 575 1,899,371,011 1,650 330,000 37.92
158 common pipistrelle (hap2.1 2025) Pipistrellus pipistrellus GCA_965204225.1_mPipPip2.hap2.1 369 1,854,961,430 1,602 320,400 36.43
159 common vampire bat (v2 HL8 alternate hap 2022 genbank) Desmodus rotundus GCA_022682395.2_HLdesRot8B.1 429 1,969,917,660 576 230,283 31.12
160 common vampire bat (v2 HL8 primary hap 2022 refseq) Desmodus rotundus GCF_022682495.2_HLdesRot8A.1 574 2,119,721,492 615 257,063 36.93
161 common vampire bat (v3 DRU21DN04 2018) Desmodus rotundus GCF_002940915.2_ASM294091v3 29,118 2,063,540,067 54,246 45,924,706 28.98
162 common warthog (WHEZ1 2021) Phacochoerus africanus GCF_016906955.1_ROS_Pafr_v1 194 2,435,083,091 523 9,510,001 36.45
163 common wombat Vombatus ursinus GCF_900497805.2_bare-nosed_wombat_genome_assembly 14,183 3,483,711,260 67,461 11,418,651 41.89
164 Corsac fox (zsh2022 2023) Vulpes corsac GCA_030463245.1_zhanglab2022 202 2,348,303,263 107 10,700 32.67
165 coyote (coyote_06102 2023) Canis latrans GCA_034620425.1_Cla-1 120 2,344,471,300 93 9,300 33.11
166 creeping vole Microtus oregoni GCF_018167655.1_Mior012 2,147 3,017,107,361 0 0 40.66
167 crested porcupine Hystrix cristata GCA_004026905.1_HysCri_v1_BIUU 1,136,598 2,470,917,678 4,351 435,100 33.81
168 Crete spiny mouse (2024) Acomys minous GCA_964271855.1_mAcoMin1 113 2,350,237,540 184 20,100 34.04
169 Cuvier's beaked whale Ziphius cavirostris GCA_004364475.1_ZipCav_v1_BIUU 3,758,276 3,150,417,206 3,229 322,900 43.63
170 cyclops roundleaf bat (Cote d'Ivoire 20210929_DDa primary hap 2024) Doryrhina cyclops GCA_043880285.1_ASM4388028v1 66 2,390,604,663 334 139,180 41.90
171 Damara mole-rat DMR 1.0 (2014 BGI) Fukomys damarensis GCF_000743615.1_DMR_v1.0 74,730 2,333,892,479 87,815 47,907,697 30.66
172 Damara mole-rat DMR 1.0 HiC (2020 DNA Zoo) Fukomys damarensis GCF_012274545.1_DMR_v1.0_HiC 73,970 2,334,375,022 88,899 48,373,868 30.61
173 dassie-rat Petromus typicus GCA_004026965.1_PetTyp_v1_BIUU 910,679 2,389,366,989 9,645 964,500 34.49
174 Daubenton's bat (alternate hap 2023) Myotis daubentonii GCA_963242275.1_mMyoDau2.1_alternate_haplotype 4,930 1,938,252,784 0 0 37.25
175 Daubenton's bat (primary hap 2023 refseq) Myotis daubentonii GCF_963259705.1_mMyoDau2.1 121 2,127,807,131 1,099 219,800 38.85
176 Daurian ground squirrel Spermophilus dauricus GCA_002406435.1_ASM240643v1 360,804 3,106,271,744 141,850 119,321,120 33.08
177 David's myotis bat Myotis davidii GCF_000327345.1_ASM32734v1 101,769 2,059,799,708 223,511 181,337,721 29.57
178 degu (3935 2012 refseq) Octodon degus GCF_000260255.1_OctDeg1.0 7,134 2,995,882,938 252,772 469,628,246 29.31
179 desert hamster (2022) Phodopus roborovskii GCF_943737965.1_PHOROB 2,079 2,384,239,561 0 0 32.63
180 Desmarest's hutia Capromys pilorides GCA_004027915.1_CapPil_v1_BIUU 2,352,358 3,023,850,356 3,492 349,200 35.30
181 dingo (2020 Alpine COOINDA U.NSW) Canis lupus dingo GCF_012295265.1_UNSW_AlpineDingo_1.0 477 2,398,209,015 325 7,414,530 42.77
182 dingo (Sandy 2020 James Cook U) Canis lupus dingo GCF_003254725.2_ASM325472v2 159 2,349,862,946 69 33,679 33.42
183 dog (Basenji MU ID 185726 2019) Canis lupus familiaris GCA_004886185.2_Basenji_breed-1.1 2,243 2,410,429,933 1,388 138,701 43.39
184 dog (Basenji UNSW-BAS-2019 2021) Canis lupus familiaris GCA_013276365.2_UNSW_CanFamBas_1.2 631 2,344,986,233 149 76,431 33.03
185 dog (Bernese Mountain Dog BD 2023) Canis lupus familiaris GCA_031010765.1_BD_1.0 175 2,340,604,999 641 39,508 32.90
186 dog (Bernese Mountain Dog OD 2023) Canis lupus familiaris GCA_031010635.1_OD_1.0 159 2,349,139,519 1,015 86,304 33.00
187 dog (boxer Tasha 2011) Canis lupus familiaris GCF_000002285.3_CanFam3.1 3,268 2,410,976,875 23,876 18,261,639 43.02
188 dog (boxer Tasha 2020) Canis lupus familiaris GCF_000002285.5_Dog10K_Boxer_Tasha 147 2,312,802,198 1,028 58,852 42.49
189 dog (Cairn Terrier CA611 2023) Canis lupus familiaris GCA_031010295.1_CA611_1.0 141 2,343,812,526 262 22,920 32.99
190 dog (German shepard Mischka 2020) Canis lupus familiaris GCF_011100685.1_UU_Cfam_GSD_1.0 2,197 2,481,983,352 585 58,500 43.95
191 dog (German Shepherd Nala 2020) Canis lupus familiaris GCA_008641055.3_ASM864105v3 410 2,407,242,830 458 6,144,667 43.00
192 dog (Labrador retriever 2023) Canis lupus familiaris GCA_031165255.1_Yella_v2 675 2,338,512,298 516 41,916 32.84
193 dog (labrador SID07034 2020) Canis lupus familiaris GCF_014441545.1_ROS_Cfam_1.0 376 2,396,858,295 575 12,662,630 42.12
194 domestic cat (Abyssinian Cinnamon 2017 WashU) Felis catus GCF_000181335.3_Felis_catus_9.0 4,508 2,521,863,845 436 45,410,675 42.79
195 domestic cat (Abyssinian Cinnamon 2021 WashU) Felis catus GCA_000181335.5_felCat9.1_X 4,507 2,521,710,482 422 45,197,951 33.35
196 domestic cat (Abyssinian Cinnamon 2021) Felis catus GCA_000181335.6_felCat9.2_X 751 2,480,971,174 422 45,197,951 33.69
197 domestic cat (Fca126 2021 Texas A&M U) Felis catus GCF_018350175.1_F.catus_Fca126_mat1.0 71 2,425,747,038 39 7,100 43.70
198 domestic ferret (JIRA1106 JCVI 2020) Mustela putorius furo GCF_011764305.1_ASM1176430v1.1 1,224 2,577,107,489 0 0 39.54
199 domestic ferret (Sable 2011 Broad) Mustela putorius furo GCA_000239315.1_MusPutFurMale1.0 4,244 2,400,178,934 72,670 74,980,417 38.91
200 domestic guinea pig (051 PalLab524CR 2023) Cavia porcellus GCF_034190915.1_mCavPor4.1 588 3,145,520,116 84 16,800 42.75
201 domestic guinea pig (2N 2008 refseq) Cavia porcellus GCF_000151735.1_Cavpor3.0 3,144 2,723,219,641 58,460 59,849,908 38.03
202 domestic yak (maiwa yakHY00 2019) Bos grunniens GCA_005887515.3_BosGru3.1 343 2,831,460,571 646 64,600 40.53
203 dugong (hap1 mDugDug1 2023) Dugong dugon GCA_030035585.1_mDugDug1.hap1 198 3,158,488,110 96 19,200 47.43
204 dugong (hap2 mDugDug1 2023) Dugong dugon GCA_030020955.1_mDugDug1.hap2 167 3,154,453,075 89 17,631 47.38
205 dwarf mongoose Helogale parvula GCA_004023845.1_HelPar_v1_BIUU 189,370 2,392,471,390 10,815 1,081,500 40.35
206 eastern cottontail (primary hap 2023) Sylvilagus floridanus GCA_949820135.1_mSylFlo1.10 99 2,848,420,111 316 31,600 44.09
207 eastern European house mouse (PWK_PhJ v2 2022) Mus musculus musculus GCA_921998335.2_PWK_PhJ_v3 208 2,507,124,360 207 2,813,974 40.60
208 eastern mole Scalopus aquaticus GCA_004024925.1_ScaAqu_v1_BIUU 640,296 2,068,871,057 7,239 723,900 32.90
209 eastern quoll Dasyurus viverrinus GCA_020854095.1_UniMelb_DasViv_v1.0 76 3,139,221,772 431 42,715 41.75
210 eastern spiny mouse (2021) Acomys dimidiatus GCA_907164435.1_mAcoDim1_REL_1905 16,311 2,296,359,214 109,220 43,625,520 33.40
211 Egyptian rousette (1219 2016 Boston U) Rousettus aegyptiacus GCF_001466805.2_Raegyp2.0 2,490 1,910,250,568 638 482,376 32.27
212 Egyptian rousette (v1 2020 refseq) Rousettus aegyptiacus GCF_014176215.1_mRouAeg1.p 29 1,893,602,072 242 26,674,495 32.62
213 Egyptian spiny mouse (US019 2019) Acomys cahirinus GCA_004027535.1_AcoCah_v1_BIUU 371,342 2,306,070,819 20,469 2,046,900 35.21
214 elk (wapiti) Cervus canadensis GCF_019320065.1_ASM1932006v1 185 2,526,613,007 6,643 1,906,222 43.17
215 ermine (2020) Mustela erminea GCF_009829155.1_mMusErm1.Pri 94 2,445,217,270 199 21,483,976 41.13
216 ermine (alternate hap 2020) Mustela erminea GCA_009829165.1_mMusErm1.alt 3,327 1,640,216,494 0 0 40.61
217 Eurasian badger (2021) Meles meles GCA_922990625.1_mMelMel3.1_maternal_haplotype_uncurated 726 2,692,729,365 27 13,500 37.74
218 Eurasian badger (v3.2 2022) Meles meles GCA_922984935.2_mMelMel3.2_paternal_haplotype 538 2,738,694,574 101 23,800 38.09
219 Eurasian field mouse (2024) Apodemus agrarius GCA_964023405.1_mApoAgr2.1 61 2,613,539,280 182 36,400 39.29
220 Eurasian red squirrel (alternate hap 2019) Sciurus vulgaris GCA_902685485.1_mSciVul1.1_alternate_haplotype 10,655 1,366,022,868 2 71 35.43
221 Eurasian red squirrel (v1.2 2020) Sciurus vulgaris GCA_902686455.2_mSciVul1.2 639 2,878,607,543 1,177 163,358,994 33.75
222 Eurasian river otter (2020) Lutra lutra GCF_902655055.1_mLutLut1.2 44 2,438,458,878 185 90,271 34.39
223 Eurasian river otter (alternate hap 2019) Lutra lutra GCA_902653095.1_mLutLut1.1_alternate_haplotype 8,506 1,081,484,062 0 0 42.29
224 Eurasian water vole (alternate hap 2020) Arvicola amphibius GCA_903992525.1_mArvAmp1.1_alternate_haplotype 16,368 1,764,008,884 105 7,311 31.38
225 Eurasian water vole (v2 2021) Arvicola amphibius GCF_903992535.2_mArvAmp1.2 215 2,297,766,297 873 6,026,960 32.43
226 European hare (LE1 primary hap 2023) Lepus europaeus GCF_033115175.1_mLepTim1.pri 651 2,930,972,321 418 82,958 44.26
227 European harvest mouse (primary hap 2024) Micromys minutus GCA_963924665.1_mMicMin1.1 894 2,651,787,409 2,020 404,000 42.52
228 European mink (alternate hap 2023) Mustela lutreola GCA_030435785.1_mMusLut2.alt 12,043 1,786,977,177 0 0 34.22
229 European mink (primary hap 2023 refseq) Mustela lutreola GCF_030435805.1_mMusLut2.pri 25 2,586,268,927 39 7,800 36.60
230 European mole (hap1 2024) Talpa europaea GCA_964194135.1_mTalEur1.hap1.1 464 2,061,000,977 1,056 211,200 33.70
231 European mole (hap2 2024) Talpa europaea GCA_964194205.1_mTalEur1.hap2.1 356 2,056,471,431 1,040 208,000 33.58
232 European pine marten (primary hap 2023) Martes martes GCA_963455335.1_mMarMar1.1 477 2,484,650,161 2,250 450,000 34.75
233 European shrew (alternate hap 2023) Sorex araneus GCA_027595995.1_mSorAra2.alt 5,699 2,319,662,114 0 0 41.95
234 European shrew (GB8-d 2012) Sorex araneus GCF_000181275.1_SorAra2.0 12,845 2,423,158,183 188,953 231,054,757 35.32
235 European shrew (primary hap 2023) Sorex araneus GCF_027595985.1_mSorAra2.pri 65 2,405,993,548 1,427 12,943,964 41.75
236 European snow vole (alternate hap 2023) Chionomys nivalis GCA_950005115.1_mChiNiv1.1_alternate_haplotype 4,255 2,022,897,225 1 33 33.35
237 European snow vole (primary hap 2023 refseq) Chionomys nivalis GCF_950005125.1_mChiNiv1.1 160 2,393,390,621 197 39,400 44.15
238 European suslik (primary hap 2024) Spermophilus citellus GCA_964194105.1_mSpeCit3.1 498 3,090,049,053 1,436 287,200 41.68
239 European woodmouse (2022 refseq) Apodemus sylvaticus GCF_947179515.1_mApoSyl1.1 497 2,889,785,202 1,129 225,617 40.60
240 European woodmouse (alternate hap 2022) Apodemus sylvaticus GCA_947179525.1_mApoSyl1.1_alternate_haplotype 10,861 2,392,986,241 2 34 39.68
241 fallow deer (Ldn47 2023) Dama dama GCF_033118175.1_ASM3311817v1 284 3,104,280,228 44 4,400 48.20
242 fallow deer (maternal hap SK-2024 2025) Dama dama GCA_048126745.1_DamDam1_v1.mat 1,304 2,723,325,442 147 14,700 41.57
243 fallow deer (paternal hap SK-2024 2025) Dama dama GCA_048127045.1_DamDam1_v1.pat 310 2,380,677,270 242 24,200 38.56
244 false killer whale (hap1 2024 genbank) Pseudorca crassidens GCA_039906515.1_mPseCra1.hap1 439 2,674,608,476 123 2,797,992 41.86
245 false killer whale (hap1 2024 refseq) Pseudorca crassidens GCF_039906515.1_mPseCra1.hap1 438 2,674,592,094 123 2,797,992 41.86
246 false killer whale (hap2 2024) Pseudorca crassidens GCA_039906525.1_mPseCra1.hap2 416 2,678,530,964 133 24,510,583 44.18
247 fat dormouse (US078 2019) Glis glis GCA_004027185.1_GliGli_v1_BIUU 433,430 2,462,087,207 10,685 1,068,500 39.98
248 fat sand rat (mPsaObe1 2021) Psammomys obesus GCF_907164565.1_mPsaObe1.curated_primary_1811 11,389 2,364,758,811 50,482 21,311,757 42.74
249 fat sand rat (Psa_ob012049795 2017) Psammomys obesus GCA_002215935.1_ASM221593v1 96,427 2,311,471,749 0 0 38.92
250 fat-tailed dunnart (SCR6 hap1 2025) Sminthopsis crassicaudata GCA_048593235.1_ASM4859323v1 7 3,239,981,553 1,908 303,949 44.27
251 fat-tailed dunnart (SCR6 hap2 2025) Sminthopsis crassicaudata GCA_048593295.1_ASM4859329v1 7 3,272,501,082 1,730 229,661 44.21
252 fin whale (hap1.1 2025) Balaenoptera physalus GCA_965194825.1_mBalPhy2.hap1.1 2,612 3,442,554,901 1,516 303,200 52.41
253 fin whale (hap2.1 2025) Balaenoptera physalus GCA_965194765.1_mBalPhy2.hap2.1 2,448 2,850,212,336 1,258 251,600 45.83
254 fishing cat (Anna 2022 U Missouri) Prionailurus viverrinus GCF_022837055.1_UM_Priviv_1.0 192 2,461,562,329 63 31,077 34.90
255 Florida manatee (CSIC 2023) Trichechus manatus latirostris GCA_030013775.1_ASM3001377v1 15,608 3,088,727,998 33 2,662 46.99
256 Florida manatee (Lorelei 2012 refseq) Trichechus manatus latirostris GCF_000243295.1_TriManLat1.0 6,323 3,103,808,406 160,167 334,708,729 38.47
257 fossa Cryptoprocta ferox GCA_004023885.1_CryFer_v1_BIUU 464,036 2,458,846,334 6,335 633,500 42.39
258 Gambian giant pouched rat Cricetomys gambianus GCA_004027575.1_CriGam_v1_BIUU 1,102,952 2,397,721,602 7,473 747,300 32.80
259 gayal (CVASU_BF_001 2021) Bos frontalis GCA_017311355.1_CVASU_Gayal_001 1,262,134 2,795,315,450 0 0 42.37
260 gayal (Nagaland 2019) Bos frontalis GCA_007844835.1_NRC_Mithun_1 5,015 3,002,445,034 301,761 105,704,412 44.11
261 Geoffroy's bat (hap1.1 2025) Myotis emarginatus GCA_965115925.1_mMyoEma1.hap1.1 402 2,109,797,427 1,540 308,000 39.36
262 Geoffroy's bat (hap2.1 2025) Myotis emarginatus GCA_965115945.1_mMyoEma1.hap2.1 504 2,081,394,546 1,597 319,400 39.23
263 Geoffroy's cat Leopardus geoffroyi GCF_018350155.1_O.geoffroyi_Oge1_pat1.0 47 2,426,387,554 45 8,500 43.28
264 giant anteater Myrmecophaga tridactyla GCA_004026745.1_MyrTri_v1_BIUU 1,621,408 3,547,273,050 8,283 828,300 39.98
265 giant otter Pteronura brasiliensis GCA_004024605.1_PteBra_v1_BIUU 644,728 2,602,275,310 7,431 743,100 41.58
266 giant panda (Jingjing v3 2020) Ailuropoda melanoleuca GCF_002007445.2_ASM200744v3 73,514 2,440,277,323 189,277 46,834,366 33.77
267 goat (v2 San Clemente 2016 USDA) Capra hircus GCF_001704415.2_ARS1.2 29,886 2,922,617,086 790 39,279 44.86
268 Gobi jerboa Orientallactaga bullata GCA_004027895.1_AllBul_v1_BIUU 1,284,382 3,093,575,781 10,987 1,098,700 47.74
269 golden hamster (Baylor 2021) Mesocricetus auratus GCF_017639785.1_BCM_Maur_2.0 6,347 2,457,078,271 711 73,849,388 32.88
270 golden hamster (Broad 2013 refseq) Mesocricetus auratus GCF_000349665.1_MesAur1.0 21,484 2,504,925,039 216,216 428,748,785 24.30
271 golden-mantled ground squirrel (hap1 2025) Callospermophilus lateralis GCA_048772815.1_mCalLat2.hap1 8,087 4,646,974,320 1,448 283,520 52.74
272 golden-mantled ground squirrel (hap2 2025) Callospermophilus lateralis GCA_048772825.1_mCalLat2.hap2 2,820 3,349,745,798 643 122,300 39.54
273 golden spiny mouse (2020) Acomys russatus GCF_903995435.1_mAcoRus1.1 623 2,301,522,284 880 7,954,169 32.57
274 gracile shrew mole Uropsilus gracilis GCA_004024945.1_UroGra_v1_BIUU 723,835 2,112,710,047 8,248 824,800 31.41
275 gray fox (Vermont ataVT051 2023) Urocyon cinereoargenteus GCA_032313775.1_UCinereo1.0 898 2,658,766,243 26 2,600 39.52
276 gray seal (hap1.1 2025) Halichoerus grypus GCA_964656455.1_mHalGry1.hap1.1 171 2,400,078,677 1,130 226,000 34.86
277 gray seal (hap2.1 2025) Halichoerus grypus GCA_964656465.1_mHalGry1.hap2.1 123 2,387,143,391 1,110 222,000 35.00
278 gray seal (241Hg 2020) Halichoerus grypus GCF_012393455.1_Tufts_HGry_1.1 6,880 2,338,243,510 117 11,700 43.32
279 gray short-tailed opossum (mMonDom1 alternate hap 2023) Monodelphis domestica GCA_027917375.1_mMonDom1.alt 8,062 2,616,995,731 24 91,053 43.40
280 gray short-tailed opossum (mMonDom1 primary hap 2023 refseq) Monodelphis domestica GCF_027887165.1_mMonDom1.pri 13 3,586,166,573 2,255 31,907,317 43.38
281 gray short-tailed opossum (MonDom5 2007) Monodelphis domestica GCF_000002295.2_MonDom5 5,016 3,598,443,077 67,660 98,827,259 54.36
282 gray squirrel (2020) Sciurus carolinensis GCF_902686445.1_mSciCar1.2 752 2,815,397,268 1,824 604,531 34.56
283 gray squirrel (alternate hap 2019) Sciurus carolinensis GCA_902685475.1_mSciCar1.1_alternate_haplotype 9,508 2,057,949,030 2 530 35.01
284 gray wolf (2021) Canis lupus GCA_905319855.2_mCanLor1.2 82 2,447,463,909 166 45,800 34.76
285 gray wolf (alternate hap 2021) Canis lupus GCA_905319845.1_mCanLor1.1_alternate_haplotype 5,536 1,446,594,657 1 500 32.70
286 great fruit-eating bat (hap1 2024) Artibeus intermedius GCA_038363145.1_mArtInt1.hap1 419 2,293,600,955 81 12,100 34.66
287 great fruit-eating bat (mArtLit1hap2 2024) Artibeus lituratus GCA_038363175.2_mArtLit1.hap2 312 2,096,453,601 54 9,100 33.94
288 great fruit-eating bat (v2 hap1 2024) Artibeus lituratus GCA_038363095.2_mArtLit.hap1 487 2,311,617,438 45 7,300 35.13
289 great roundleaf bat (v2 ML-2016 2016) Hipposideros armiger GCF_001890085.2_ASM189008v1 7,387 2,236,326,314 172,750 281,788,247 26.87
290 greater bulldog bat Noctilio leporinus GCA_004026585.1_NocLep_v1_BIUU 298,222 2,098,501,394 6,171 617,100 35.30
291 Greater cane rat Thryonomys swinderianus GCA_004025085.1_ThrSwi_v1_BIUU 1,889,641 2,662,148,533 8,825 882,500 41.84
292 greater horseshoe bat (MPI-CBG alternate hap 2019) Rhinolophus ferrumequinum GCA_004115295.1_mRhiFer1_v1.h 13,424 1,514,615,512 2 1,000 34.47
293 greater horseshoe bat (v2 MPI-CBG 2019) Rhinolophus ferrumequinum GCF_004115265.2_mRhiFer1_v1.p 134 2,075,768,562 158 7,546,098 34.43
294 greater mouse-eared bat (2020 Bat1K) Myotis myotis GCF_014108235.1_mMyoMyo1.p 93 2,002,797,769 538 28,953,405 35.85
295 greater mouse-tailed bat (20210906_DDa primary hap 2024) Rhinopoma microphyllum GCA_043880545.1_ASM4388054v1 106 2,564,586,454 152 63,062 41.12
296 greater sac-winged bat (primary hap 2024 refseq) Saccopteryx bilineata GCF_036850765.1_mSacBil1_pri_phased_curated 256 2,612,309,609 468 33,092,045 43.31
297 greater spear-nosed bat (2021 Texas Tech U) Phyllostomus hastatus GCF_019186645.2_TTU_PhHast_1.1 534 2,089,223,459 55 5,466 30.93
298 grey whale Eschrichtius robustus GCA_004363415.1_EscRob_v1_BIUU 1,036,148 2,617,572,198 10,622 1,062,200 45.58
299 grey whale (mEscRob2 alternate hap 2023) Eschrichtius robustus GCA_028021475.1_mEscRob2.alt 14,442 2,787,390,652 0 0 45.70
300 grey whale (primary hap 2023 genbank) Eschrichtius robustus GCA_028021215.1_mEscRob2.pri 704 2,982,434,994 279 55,800 46.40
301 grey whale (primary hap 2023 refseq) Eschrichtius robustus GCF_028021215.1_mEscRob2.pri 703 2,982,418,581 279 55,800 46.40
302 hairy big-eared bat (US037 2019 Broad) Micronycteris hirsuta GCA_004026765.1_MicHir_v1_BIUU 550,090 2,314,654,405 3,218 321,800 34.43
303 Hanaki's dwarf bat (2024) Pipistrellus hanaki GCA_964339955.1_mPipHan1.1 141 1,892,221,984 306 34,100 38.42
304 harbor porpoise (primary hap 2024 genbank) Phocoena phocoena GCA_963924675.1_mPhoPho1.1 440 2,512,729,496 966 193,200 39.05
305 harbor porpoise (primary hap 2024 refseq) Phocoena phocoena GCF_963924675.1_mPhoPho1.1 439 2,512,713,112 966 193,200 39.05
306 harbor seal Phoca vitulina GCF_004348235.1_GSC_HSeal_1.0 5,130 2,362,163,281 16,480 21,441,505 42.93
307 Hawaiian monk seal (2021 Johns Hopkins U) Neomonachus schauinslandi GCF_002201575.2_ASM220157v2 7,487 2,417,544,661 25,763 42,900,233 42.85
308 hazel dormouse Muscardinus avellanarius GCA_004027005.1_MusAve_v1_BIUU 466,805 2,527,147,110 15,076 1,507,600 44.00
309 hazel dormouse (alternate hap 2023) Muscardinus avellanarius GCA_963383665.1_mMusAve1.1_alternate_haplotype 31,856 1,187,222,402 0 0 41.89
310 hazel dormouse (primary hap 2023) Muscardinus avellanarius GCA_963383645.1_mMusAve1.1 213 2,497,520,702 1,805 361,000 43.99
311 hippopotamus (BS01 2019 Broad) Hippopotamus amphibius GCA_004027065.1_HipAmp_v1_BIUU 967,869 2,677,915,672 4,730 473,000 41.29
312 hippopotamus (HIP001 2018) Hippopotamus amphibius GCA_002995585.1_ASM299558v1 128,772 2,425,746,322 153,125 130,442,674 36.50
313 hippopotamus (mHipAmp2 hap1 2023) Hippopotamus amphibius kiboko GCA_030028035.1_mHipAmp2.hap1 545 2,533,318,371 83 16,600 35.57
314 hippopotamus (v2 hap2 2023 refseq) Hippopotamus amphibius kiboko GCF_030028045.1_mHipAmp2.hap2 357 2,538,259,262 226 45,200 35.48
315 hirola (BS46 2019 Broad) Beatragus hunteri GCA_004027495.1_BeaHun_v1_BIUU 535,889 2,697,255,800 9,287 928,700 48.62
316 Hispaniolan solenodon Solenodon paradoxus GCA_004363575.1_SolPar_v1_BIUU 176,618 2,109,877,870 5,186 518,600 27.36
317 hispid cotton rat Sigmodon hispidus GCA_004025045.1_SigHis_v1_BIUU 883,546 2,730,600,022 13,744 1,374,400 38.08
318 Hoffmann's two-fingered sloth Choloepus hoffmanni GCA_000164785.2_C_hoffmanni-2.0.1 269,078 3,285,969,814 101,085 62,661,069 51.23
319 hog-nosed bat Craseonycteris thonglongyai GCA_004027555.1_CraTho_v1_BIUU 1,224,256 2,272,093,077 6,224 622,400 39.99
320 Honduran yellow-shouldered bat (v2.1 Veracruz 20B 2020) Sturnira hondurensis GCF_014824575.3_WHU_Shon_v2.1 25,848 2,096,403,328 38,648 4,340,668 31.29
321 horse (maternal 2024) Equus caballus GCA_036418255.1_mEquCab1.mat 821 2,331,848,197 210 42,000 34.70
322 horse (paternal hap 2024) Equus caballus GCA_036426135.1_mEquCab1.pat 602 2,596,737,506 114 22,800 35.42
323 horse (thoroughbred H_3958 2024) Equus caballus GCF_041296265.1_TB-T2T 625 2,769,454,835 5 989,369 35.73
324 horse (Twilight 2018) Equus caballus GCF_002863925.1_EquCab3.0 4,701 2,506,966,135 6,294 9,435,481 44.70
325 house mouse (129S1_SvImJv1 2016) Mus musculus GCA_001624185.1_129S1_SvImJ_v1 7,154 2,732,673,693 366,945 411,134,550 34.37
326 house mouse (129S1_SvImJ_v3 2022) Mus musculus GCA_921998555.2_129S1_SvImJ_v3 180 2,516,264,171 1,557 10,020,189 40.65
327 house mouse (AKR_J v3 2022) Mus musculus GCA_922000895.2_AKR_J_v3 195 2,502,437,360 2,714 3,777,539 40.71
328 house mouse (alternate hap 2023) Mus musculus GCA_949316305.1_mMusMuc1.1_alternate_haplotype 1,806 114,758,919 0 0 72.25
329 house mouse (A_J v3 2022) Mus musculus GCA_921998355.2_A_J_v3 158 2,528,261,066 608 15,412,147 40.62
330 house mouse (BALB_cJ v3 2022) Mus musculus GCA_921997145.2_BALB_cJ_v3 210 2,519,913,072 274 4,941,394 40.78
331 house mouse (C3H_HeJ v3 2022) Mus musculus GCA_921997125.2_C3H_HeJ_v3 171 2,532,437,445 844 24,071,608 40.45
332 house mouse (C57BL_6J T2T 2024) Mus musculus GCA_964188535.1_C57BL_6J_T2T_v1 237 2,731,306,900 108 3,989,246 46.82
333 house mouse (CBA_J v3 2022) Mus musculus GCA_921998905.2_CBA_J_v3 143 2,520,503,295 658 12,014,811 40.65
334 house mouse (DBA_2J v3 2022) Mus musculus GCA_921998315.2_DBA_2J_v3 352 2,603,173,077 153 93,627 41.77
335 house mouse (FVB_NJ v3 2022) Mus musculus GCA_921998635.2_FVB_NJ_v3 376 2,516,166,699 6,244 41,610,471 39.82
336 house mouse (LP_J v3 2022) Mus musculus GCA_947599735.1_LP_J_v3 428 2,856,326,412 386 347,757 46.40
337 house mouse (NOD_ShiLtJ v3 2022) Mus musculus GCA_921998325.2_NOD_ShiLtJ_v3 168 2,517,363,844 1,462 12,565,368 40.61
338 house mouse (NZO_HlLtJ v3 2022) Mus musculus GCA_947593165.1_NZO_HlLtJ_v3 383 2,822,921,548 234 44,812 45.99
339 house mouse (primary hap 2023) Mus musculus GCA_949316315.1_mMusMuc1.1 179 2,770,968,735 101 20,200 45.38
340 house mouse C57BL/6J 2020 GRC Mus musculus GCF_000001635.27_GRCm39 61 2,728,222,451 334 73,600,668 44.37
341 house mouse C57BL_6NJ (2016) Mus musculus GCA_001632555.1_C57BL_6NJ_v1 3,894 2,806,800,287 410,660 492,018,984 33.23
342 house mouse C57BL_6NJ (2022) Mus musculus GCA_921999865.2_C57BL_6NJ_v3 207 2,514,593,528 1,127 6,079,266 40.74
343 humpback whale (KW2013002 2024) Megaptera novaeangliae GCA_041834305.1_ASM4183430v1 1,355 3,146,604,256 88 8,800 48.29
344 hybrid cattle (Angus x Brahman F1 Angus haplotype 2018) Bos indicus x Bos taurus GCA_003369685.2_UOA_Angus_1 1,435 2,580,764,822 277 6,480,811 47.42
345 hybrid cattle (Angus x Brahman F1 Brahman haplotype 2018) Bos indicus x Bos taurus GCF_003369695.1_UOA_Brahman_1 1,250 2,680,953,056 302 1,636,497 47.57
346 Iberian mole (v2.1 TD23 2020) Talpa occidentalis GCF_014898055.3_MPIMG_talOcc4v2.1 3,202 2,080,989,295 3,575 2,281,188 32.63
347 Indian false vampire Lyroderma lyra GCA_004026885.1_MegLyr_v1_BIUU 1,902,801 2,620,948,449 6,266 626,600 39.97
348 Indian flying fox Pteropus vampyrus GCF_902729225.1_Ma_sr-lr_union100 16,113 1,985,219,947 17,500 17,910,495 33.84
349 Indian short-nosed fruit bat (CYSPWHU 2023) Cynopterus sphinx GCA_030015415.1_ASM3001541v1 181 1,857,070,059 26 2,600 30.54
350 Indochinese shrew (US011 2019 Broad) Crocidura indochinensis GCA_004027635.1_CroInd_v1_BIUU 2,415,412 3,082,217,326 5,267 526,700 46.21
351 Indus River dolphin Platanista minor GCA_004363435.1_PlaMin_v1_BIUU 1,098,790 2,671,072,510 11,702 1,170,200 45.60
352 Inner Mongolia cashmere goat (2024) Capra hircus GCA_041735815.1_T2T-goat2.0 31 2,863,923,675 0 0 44.34
353 intermediate horseshoe bat (China 20211001_DDa primary hap 2024) Rhinolophus affinis GCA_043728065.1_ASM4372806v1 2,194 2,302,456,897 37 14,340 42.96
354 intermediate roundleaf bat (primary hap 2023) Hipposideros larvatus GCA_031876335.1_mHipLar1.pri 69 2,338,923,724 119 33,404 35.41
355 jaguar (BS21 2019) Panthera onca GCA_004023805.1_PanOnc_v1_BIUU 438,792 2,504,534,411 21,329 2,132,900 43.76
356 jaguar (hap1 2025) Panthera onca GCA_046562885.1_mPanOnc1_haplotype_1 115 2,303,345,105 140 28,000 41.30
357 jaguar (hap2 2025) Panthera onca GCA_046562875.1_mPanOnc1_haplotype_2 85 2,487,960,463 200 40,000 41.80
358 jaguar (Sample0147 2023) Panthera onca GCF_028533385.1_Panthera_onca_HiC 36,243 2,380,259,976 56,371 16,621,100 33.19
359 jaguarundi Puma yagouaroundi GCF_014898765.1_PumYag 10,948 2,473,139,798 42,499 53,379,134 42.39
360 Jamaican fruit-eating bat (1a 2020 Wuhan U) Artibeus jamaicensis GCF_014825515.1_WHU_Ajam_v2 56,740 2,207,618,356 110,840 24,988,949 30.66
361 Jamaican fruit-eating bat (2021) Artibeus jamaicensis GCF_021234435.1_CSHL_Jam_final 868 2,108,405,990 3 69 31.62
362 Japanese wild mouse (2022) Mus musculus molossinus GCA_921999095.2_JF1_MsJ_v3 1,398 2,727,434,176 397 115,853 42.60
363 Java mouse-deer (US108 2019 Broad) Tragulus javanicus GCA_004024965.1_TraJav_v1_BIUU 1,156,990 2,582,625,763 2,829 282,900 39.90
364 killer whale (2022) Orcinus orca GCF_937001465.1_mOrcOrc1.1 448 2,647,351,467 123 24,436 41.64
365 killer whale (alternate hap 2022) Orcinus orca GCA_937001455.1_mOrcOrc1.1_alternate_haplotype 12,410 1,882,900,201 0 0 41.12
366 killer whale (Morgan 2013) Orcinus orca GCF_000331955.2_Oorc_1.1 1,668 2,372,919,875 78,441 123,337,763 41.73
367 koala (Bilbo 61053 2022) Phascolarctos cinereus GCA_003287225.2_phaCin_HiC 1,246 3,192,631,935 669 66,801 39.25
368 Kuhl's pipistrelle (2020) Pipistrellus kuhlii GCF_014108245.1_mPipKuh1.p 202 1,775,688,541 394 12,201,491 34.57
369 large flying fox Pteropus vampyrus GCF_000151845.1_Pvam_2.0 36,094 2,198,284,804 189,340 181,040,307 33.53
370 large Japanese field mouse (IB14-021 2017) Apodemus speciosus GCA_002335545.1_Aspe_assembly01 336,123 3,494,278,632 4,289,924 1,479,927,621 18.34
371 large tree shrew (BS70 2022) Tupaia tana GCA_026018925.1_mTupTan1 1,198 2,948,294,157 1,188 115,755 46.11
372 least weasel (hap1.1 2025) Mustela nivalis GCA_964662115.1_mMusNiv2.hap1.1 3,180 3,437,873,602 2,938 587,616 49.65
373 least weasel (hap2.1 2025) Mustela nivalis GCA_964662095.1_mMusNiv2.hap2.1 2,239 2,835,054,152 2,709 541,800 42.56
374 leopard (Hobbes primary hap 2022) Panthera pardus GCF_024362965.1_ASM2436296v1 382 2,441,343,278 335 163,262 34.04
375 leopard (Maewha 2016 refseq) Panthera pardus GCF_001857705.1_PanPar1.0 50,377 2,578,019,207 214,953 99,153,465 41.28
376 leopard cat Prionailurus bengalensis GCF_016509475.1_Fcat_Pben_1.1_paternal_pri 84 2,435,718,761 56 12,400 43.33
377 Leschenault's rousette (2020) Rousettus leschenaultii GCA_015472975.1_rouLes_1.0 8,141 1,918,041,062 100,669 16,953,581 30.96
378 lesser Egyptian jerboa (2021) Jaculus jaculus GCF_020740685.1_mJacJac1.mat.Y.cur 160 2,863,865,261 561 13,702,780 44.14
379 lesser Egyptian jerboa (alternate hap 2021) Jaculus jaculus GCA_020740715.1_mJacJac1.pat.decon 508 2,595,216,862 2,875 188,089,954 40.53
380 lesser Egyptian jerboa (JJ0015 2012 refseq) Jaculus jaculus GCF_000280705.1_JacJac1.0 10,896 2,835,242,767 326,464 364,982,898 33.98
381 lesser false vampire bat (Vietnam 20211001_DDb primary hap 2024) Megaderma spasma GCA_043880595.1_ASM4388059v1 419 2,124,740,378 866 44,474,144 35.96
382 lesser horseshoe bat (hap1 2024) Rhinolophus hipposideros GCA_964194185.1_mRhiHip2.hap1.1 723 2,171,328,640 1,627 325,400 33.62
383 lesser horseshoe bat (hap2 2024) Rhinolophus hipposideros GCA_964194215.1_mRhiHip2.hap2.1 1,079 2,240,459,116 1,648 329,600 34.27
384 lesser noctule (v2 hap1 2025) Nyctalus leisleri GCA_964264875.2_mNycLei1.hap1.2 585 2,226,338,041 302 60,400 42.54
385 lesser noctule (v2 hap2 2025) Nyctalus leisleri GCA_964264895.2_mNycLei1.hap2.2 673 2,021,249,169 247 49,400 40.67
386 lesser panda (RP43 2017) Ailurus styani GCA_002007465.1_ASM200746v1 11,589 2,342,939,051 137,333 34,037,754 40.32
387 lesser sac-winged bat (primary hap 2024 refseq) Saccopteryx leptura GCF_036850995.1_mSacLep1_pri_phased_curated 168 2,576,513,769 573 19,614,433 42.31
388 lion Panthera leo GCF_018350215.1_P.leo_Ple1_pat1.1 54 2,297,568,983 55 9,500 42.28
389 little brown bat Myotis lucifugus GCF_000147115.1_Myoluc2.0 11,654 2,034,575,300 61,131 68,155,432 35.84
390 little pocket mouse (longimembris alternate hap 2022) Perognathus longimembris GCA_024363435.1_mPerLon1.0.a 718 2,257,225,505 229 22,900 43.22
391 little pocket mouse (longimembris primary hap 2022) Perognathus longimembris GCA_024363575.1_mPerLon1.0.p 1,135 2,346,747,858 215 21,500 43.76
392 little tube-nosed bat Murina aurata feae GCA_004026665.1_MurFea_v1_BIUU 880,177 2,331,551,382 6,795 679,500 41.20
393 long-finned pilot whale (v2 primary hap 2024 refseq) Globicephala melas GCF_963455315.2_mGloMel1.2 992 2,651,276,051 1,084 216,617 42.02
394 long-finned pilot whale (X-22926-18 2019) Globicephala melas GCF_006547405.1_ASM654740v1 6,416 2,333,163,658 14,859 9,903,588 45.42
395 long-tailed chinchilla Chinchilla lanigera GCF_000276665.1_ChiLan1.0 2,839 2,390,868,971 78,817 106,575,991 29.61
396 long-tongued fruit bat (US102 2019 Broad) Macroglossus sobrinus GCA_004027375.1_MacSob_v1_BIUU 171,985 1,897,644,983 2,056 205,600 32.67
397 Lowland paca Cuniculus paca GCA_004365215.1_CunPac_v1_BIUU 3,768,450 3,399,583,187 3,060 306,000 38.62
398 Malayan pangolin (MP_PG03-UM 2016 refseq) Manis javanica GCF_001685135.1_ManJav1.0 80,670 2,547,395,906 984,658 198,861,919 32.48
399 Malayan pangolin YNU ManJav 2.0 Manis javanica GCF_014570535.1_YNU_ManJav_2.0 17,969 2,438,977,774 57,746 200,728,160 31.43
400 marsupial mole (Waite Creek area ABTC07570 2025) Notoryctes typhlops GCA_048126345.1_UniMelb_NotTyph_v1.0 693 3,845,140,558 196 409,544 47.20
401 Masai giraffe (MA1 2016 Penn St) Giraffa tippelskirchi GCA_001651235.1_ASM165123v1 513,166 2,705,052,085 257,672 94,132,413 42.43
402 meadow jumping mouse Zapus hudsonius GCA_004024765.1_ZapHud_v1_BIUU 1,158,100 2,611,189,839 7,610 761,000 39.92
403 meadow vole (hap1 2024) Microtus pennsylvanicus GCA_037038515.1_mMicPen1.hap1 181 2,369,135,991 60 11,000 41.94
404 meadow vole (hap2 2024) Microtus pennsylvanicus GCA_037039175.1_mMicPen1.hap2 143 2,156,400,253 53 9,700 32.15
405 meerkat (VVHF042 2019 DNA Zoo refseq) Suricata suricatta GCF_006229205.1_meerkat_22Aug2017_6uvM2_HiC 63,791 2,353,578,744 65,245 6,638,100 40.04
406 Merriam's kangaroo rat (MVZ:Mamm:240054 alternate hap 2022) Dipodomys merriami GCA_024711525.1_mDipMer1.0.a 3,482 2,921,273,682 181 18,100 53.95
407 Merriam's kangaroo rat (MVZ:Mamm:240054 primary hap 2022) Dipodomys merriami GCA_024711535.1_mDipMer1.0.p 4,354 3,365,254,602 182 18,200 52.00
408 Merriam's kangaroo rat (MVZ:Mamm:240054 primary hap 2022) Dipodomys merriami GCF_024711535.1_mDipMer1.0.p 4,353 3,365,237,443 182 18,200 52.00
409 Merriam's long-tongued bat (hap1 2024) Glossophaga mutica GCA_039655065.1_mGloMut1.hap1 82 2,159,908,085 47 8,300 32.97
410 Merriam's long-tongued bat (hap2 2024) Glossophaga mutica GCA_039656995.1_mGloMut1.hap2 71 2,156,622,230 45 8,200 32.89
411 Mexican gray wolf (hap1 2025 refseq) Canis lupus baileyi GCF_048164855.1_mCanLup2.hap1 249 2,495,589,887 167 29,900 35.20
412 Mexican gray wolf (hap2 2025) Canis lupus baileyi GCA_048164845.1_mCanLup2.hap2 155 2,336,397,564 124 21,200 34.24
413 minke whale (2013 refseq) Balaenoptera acutorostrata scammoni GCF_000493695.1_BalAcu1.0 10,776 2,431,687,698 173,296 145,030,652 30.97
414 minke whale (alternate hap 2023) Balaenoptera acutorostrata GCA_950005055.1_mBalAcu1.1_alternate_haplotype 21,271 2,590,401,380 1 27 41.31
415 minke whale (primary hap 2023 refseq) Balaenoptera acutorostrata GCF_949987535.1_mBalAcu1.1 1,374 2,772,885,358 1,177 235,400 42.67
416 Mongolian gerbil (243 2017 Lucigen Corp.) Meriones unguiculatus GCF_002204375.1_MunDraft-v1.0 68,793 2,523,124,066 91,601 120,571,873 35.98
417 Mongolian gerbil (EAM2014 2019 BGI) Meriones unguiculatus GCA_008131255.1_ASM813125v1 309,090 2,537,531,842 103,843 24,688,023 34.65
418 Mongolian gerbil (TT.TT164.6M 2023) Meriones unguiculatus GCF_030254825.1_Bangor_MerUng_6.1 193 2,702,201,048 53 5,301 39.22
419 monito del monte (mDroGli1 alternate hap 2021) Dromiciops gliroides GCA_019395325.1_mDroGli1.alt 9,926 2,818,512,018 33 1,259 42.26
420 monito del monte (primary hap 2021 refseq) Dromiciops gliroides GCF_019393635.1_mDroGli1.pri 17 3,303,199,800 260 2,929,889 42.81
421 Montane guinea pig Cavia tschudii GCA_004027695.1_CavTsc_v1_BIUU 1,368,179 3,077,352,510 11,321 1,132,100 40.42
422 moose/elk (2024) Alces alces GCA_964270355.1_Elg.assembly.v.1.0 1,737 2,545,527,011 3 40 38.35
423 moose/elk (AALL_1980 2023) Alces alces GCA_015832495.2_NRM_Aalces_2_0.fsa 5,939 2,487,828,707 71,769 112,272,084 34.09
424 moose/elk (MIG12-28694850 2019) Alces alces GCA_007570765.1_GSC_moose_1.0 47,840 2,742,408,694 83,831 201,644,727 40.12
425 mountain beaver Aplodontia rufa GCA_004027875.1_AplRuf_v1_BIUU 1,279,526 3,005,535,537 7,253 725,300 38.23
426 muskrat Ondatra zibethicus GCA_004026605.1_OndZib_v1_BIUU 565,356 2,562,752,769 6,243 624,300 35.24
427 naked mole-rat (MEF-2018 2020) Heterocephalus glaber GCA_014060925.1_Heter_glaber.v1.7_hic_pac 9,262 3,041,864,219 139,535 149,339,004 34.22
428 naked mole-rat (NMR 29 2012 refseq) Heterocephalus glaber GCF_000247695.1_HetGla_female_1.0 4,229 2,618,204,639 110,424 303,433,536 28.93
429 narwhal (Baffin Bay 2019) Monodon monoceros GCF_005190385.1_NGI_Narwhal_1 6,972 2,355,574,979 18,323 11,468,950 43.79
430 narwhal (Baffin Bay Population NGI 2022) Monodon monoceros GCA_005190385.3_NGI_Narwhal_2 101 2,341,954,608 313 31,300 37.30
431 Natal long-fingered bat Miniopterus natalensis GCF_001595765.1_Mnat.v1 1,269 1,803,099,001 204,616 68,267,343 27.90
432 Nathusius's pipistrelle (primary hap 2024) Pipistrellus nathusii GCA_963693515.1_mPipNat.pri 153 1,804,478,338 263 52,641 35.23
433 Nathusius's pipistrelle (hap1.1 2025) Pipistrellus nathusii GCA_964656225.1_mPipNat1.hap1.1 1,062 1,916,223,105 1,836 367,200 37.99
434 Nathusius's pipistrelle (hap2.1 2025) Pipistrellus nathusii GCA_964656075.1_mPipNat1.hap2.1 653 1,961,094,329 1,832 366,400 39.62
435 Natterer's bat (hap1.2 2025) Myotis nattereri GCA_964212035.2_mMyoNat1.hap1.2 212 2,138,592,721 225 45,000 39.05
436 Natterer's bat (hap2.2 2025) Myotis nattereri GCA_964212025.2_mMyoNat1.hap2.2 173 1,932,610,702 136 27,200 38.23
437 neotropical fruit bat Sturnira hondurensis GCF_014824575.2_WHU_Shon_v2.1 26,068 2,096,623,354 38,675 4,342,691 31.29
438 Nilgiri tahr Nilgiritragus hylocrius GCA_004026825.1_HemHyl_v1_BIUU 469,163 2,715,042,536 10,387 1,038,700 48.51
439 nine-banded armadillo (v2 hap1 2023) Dasypus novemcinctus GCA_030445055.2_mDasNov1.1.hap1 588 3,296,222,425 823 24,008,378 42.23
440 nine-banded armadillo (v2 hap2 2023) Dasypus novemcinctus GCF_030445035.2_mDasNov1.1.hap2 546 3,610,551,914 793 11,749,958 53.17
441 nine-banded armadillo (v3.2 3-136 2012 Baylor) Dasypus novemcinctus GCF_000208655.3_Dasnov3.2 46,380 3,631,323,489 268,437 331,628,649 38.29
442 North American deer mouse (MVZ:Mamm:240117 alternate hap 2022) Peromyscus maniculatus sonoriensis GCA_026167925.1_mPerMan1.0.a 1,006 2,625,495,359 229 22,900 37.61
443 North American deer mouse (MVZ:Mamm:240117 primary hap 2022) Peromyscus maniculatus sonoriensis GCA_026229955.1_mPerMan1.0.p 1,838 2,847,741,276 244 24,400 48.05
444 North American porcupine (mEreDor1 alternate hap 2023) Erethizon dorsatum GCA_028500835.1_mEreDor1.alt 5,050 1,937,137,571 1 37 40.58
445 North American porcupine (mEreDor1 primary hap 2023) Erethizon dorsatum GCA_028451465.1_mEreDor1.pri 116 2,432,147,792 277 68,864 41.67
446 North Atlantic right whale (hap1 2023) Eubalaena glacialis GCA_028571275.1_mEubGla1.hap1 947 2,615,329,254 385 4,162,427 43.42
447 North Atlantic right whale (hap2 + XY 2023 refseq) Eubalaena glacialis GCF_028564815.1_mEubGla1.1.hap2._XY 789 2,843,691,573 367 4,958,084 43.93
448 North Pacific right whale Eubalaena japonica GCA_004363455.1_EubJap_v1_BIUU 1,353,963 2,693,575,300 7,094 709,400 45.71
449 northern American river otter Lontra canadensis GCF_010015895.1_GSC_riverotter_1.0 6,613 2,404,424,673 7,620 10,169,781 41.05
450 northern bat (alternate hap 2023) Cnephaeus nilssonii GCA_951640545.1_mEptNil1.1_alternate_haplotype 4,896 1,900,360,802 3 600 36.13
451 northern bat (primary hap 2023) Cnephaeus nilssonii GCA_951640355.1_mEptNil1.1 207 2,064,119,045 1,423 284,600 38.22
452 northern black mastiff bat (mMolNig1 2022) Molossus nigricans GCA_026936385.1_BBF_mMolNig1_v1 146 2,407,891,554 199 99,500 39.26
453 northern black mastiff bat (mMolNig1hap1 2024) Molossus nigricans GCA_039880945.1_mMolNig1.hap1 366 2,567,103,348 113 17,300 41.59
454 northern black mastiff bat (mMolNig1hap2 2024) Molossus nigricans GCA_039880925.1_mMolNig1.hap2 282 2,394,902,263 80 11,800 40.28
455 northern bottlenose whale (alternate hap 2023) Hyperoodon ampullatus GCA_949752845.1_mHypAmp2.1_alternate_haplotype 23,401 2,477,781,444 0 0 41.73
456 northern bottlenose whale (primary hap 2023) Hyperoodon ampullatus GCA_949752795.1_mHypAmp2.1 757 2,828,760,712 1,098 219,600 44.84
457 northern elephant seal (BS05 2019 Broad) Mirounga angustirostris GCA_004023865.1_MirAng_v1_BIUU 321,256 2,407,319,723 9,483 948,300 43.85
458 northern elephant seal (CCGP_5_RB_7025 hap1 2023 genbank) Mirounga angustirostris GCA_029215605.1_mMirAng1.0.hap1 498 2,430,321,998 98 9,800 35.33
459 Northern elephant seal (CCGP_5_RB_7025 hap1 2023 refseq) Mirounga angustirostris GCF_029215605.1_mMirAng1.0.hap1 497 2,430,305,188 98 9,800 35.33
460 northern elephant seal (CCGP_5_RB_7025 hap2 2023) Mirounga angustirostris GCA_029215635.1_mMirAng1.0.hap2 422 2,451,151,009 60 6,000 35.48
461 northern elephant seal (v3 JK_09032017 2022) Mirounga angustirostris GCF_021288785.2_ASM2128878v3 142,455 2,366,166,981 39,936 15,295,600 33.76
462 northern fur seal Callorhinus ursinus GCF_003265705.1_ASM326570v1 13,803 2,705,476,987 38,666 53,834,781 42.55
463 northern gundi (US049 2019) Ctenodactylus gundi GCA_004027205.1_CteGun_v1_BIUU 860,073 2,322,471,743 5,037 503,700 33.74
464 northern gundi (hap1 2025) Ctenodactylus gundi GCA_048771875.1_mCteGun2.hap1 535 2,184,404,205 117 19,200 30.65
465 northern gundi (hap2 2025) Ctenodactylus gundi GCA_048771865.1_mCteGun2.hap2 1,031 2,329,663,899 115 19,300 34.10
466 northern mole vole Ellobius talpinus GCA_001685095.1_ETalpinus_0.1 350,460 2,265,966,243 371,627 22,296,864 29.05
467 northern white rhinoceros Ceratotherium simum cottoni GCA_004027795.1_CerCot_v1_BIUU 942,426 2,666,617,437 7,054 705,400 38.91
468 northern woolly horseshoe bat (20210929_DDc primary hap 2024) Rhinolophus perniger lanosus GCA_043748575.1_ASM4374857v1 66 2,185,535,924 63 21,100 39.98
469 Norway rat (BN/NHsdMcwi 2024 genbank) Rattus norvegicus GCA_036323735.1_GRCr8 77 2,849,597,507 220 4,130,577 40.06
470 Norway rat (BN/NHsdMcwi 2024 refseq) Rattus norvegicus GCF_036323735.1_GRCr8 76 2,849,581,192 220 4,130,577 42.82
471 Norway rat (F344/Stm 2024) Rattus norvegicus GCA_041222355.1_F344_StmMcwi 120 2,792,085,934 234 1,038,805 40.09
472 Norway rat BN7 haplotype Rattus norvegicus GCA_015244455.1_mRatBN7.1_alternate_haplotype 3,156 286,931,382 6 327 50.93
473 Norway rat BN7.2 Rattus norvegicus GCF_015227675.2_mRatBN7.2 176 2,647,915,728 581 21,334,956 45.26
474 Norway rat celera Rattus norvegicus GCF_000002265.2_Rn_Celera 7,032 2,616,369,673 111,391 123,963,010 41.64
475 Norway rat Rnor6.0 Rattus norvegicus GCF_000001895.5_Rnor_6.0 953 2,870,182,909 145,731 140,322,104 42.11
476 Norway rat SHR/Utx RGD_8142385 2022 Rattus norvegicus GCA_023515785.1_UTH_Rnor_SHR_Utx 2,151 2,866,391,611 1,256 5,112,594 38.36
477 Norway rat SHRSP/BppUtx 2022 Rattus norvegicus GCA_021556685.1_UTH_Rnor_SHRSP_BbbUtx_1.0 2,734 2,907,517,304 1,610 1,603,696 46.50
478 Norway rat WKY/Bbb 2022 Rattus norvegicus GCA_023515805.1_UTH_Rnor_WKY_Bbb_1.0 3,553 2,910,747,220 1,456 5,804,136 38.26
479 nutria Myocastor coypus GCA_004027025.1_MyoCoy_v1_BIUU 1,669,667 2,903,175,784 15,249 1,524,900 42.58
480 okapi Okapia johnstoni GCA_001660835.1_ASM166083v1 837,169 2,878,121,957 376,008 139,805,686 40.84
481 Ord's kangaroo rat Dipodomys ordii GCF_000151885.1_Dord_2.0 65,193 2,236,368,823 83,035 171,054,779 36.61
482 pacarana Dinomys branickii GCA_004027595.1_DinBra_v1_BIUU 1,158,438 2,688,563,719 6,392 639,200 36.00
483 Pacific pocket mouse (BS65 2019 Broad) Perognathus longimembris pacificus GCA_004363475.1_PerLonPac_v1_BIUU 2,409,818 2,601,695,796 18,801 1,880,100 48.44
484 Pacific pocket mouse (PPM17 2022 San Diego Zoo) Perognathus longimembris pacificus GCF_023159225.1_ASM2315922v1 6,180 2,212,099,196 1,807 797,500 42.64
485 Pacific walrus Odobenus rosmarus divergens GCF_000321225.1_Oros_1.0 3,893 2,400,150,193 66,766 99,898,119 30.44
486 Pacific white-sided dolphin Sagmatias obliquidens GCF_003676395.1_ASM367639v1 5,013 2,332,936,118 16,699 10,292,894 45.47
487 pale spear-nosed bat (alternate hap MPI-MPIP 2019) Phyllostomus discolor GCA_004115245.1_mPhyDis1_v1.h 10,835 2,050,602,545 38 18,868 29.66
488 pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 alternate hap 2020) Phyllostomus discolor GCA_004115245.2_mPhyDis1.alti.v3 10,857 2,051,656,167 38 18,868 29.67
489 pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 primary hap 2020) Phyllostomus discolor GCF_004126475.2_mPhyDis1.pri.v3 77 2,108,832,841 884 15,088,856 30.59
490 Pallas's mastiff bat Molossus molossus GCF_014108415.1_mMolMol1.p 60 2,315,568,481 349 47,372,874 37.10
491 pallid bat (TK200870 primary hap 2023) Antrozous pallidus GCA_027563665.1_DD_ASM_mAP_20210503 93 2,126,460,045 234 5,884,678 39.43
492 Parnell's mustached bat (2013) Pteronotus parnellii GCA_000465405.1_ASM46540v1 177,401 1,960,317,893 265,720 13,701,221 29.07
493 Parnell's mustached bat (Mesoamerican 2021) Pteronotus mesoamericanus GCF_021234165.1_CSHL_Meso_final 333 2,074,649,091 12 276 30.91
494 particolored bat (primary hap 2024) Vespertilio murinus GCA_963924515.1_mVesMur1.1 178 1,925,577,803 980 196,000 37.48
495 Patagonian cavy Dolichotis patagonum GCA_004027295.1_DolPat_v1_BIUU 1,905,764 3,289,614,431 6,223 622,300 40.23
496 Pere David's deer Elaphurus davidianus GCA_002443075.1_Milu1.0 194,812 2,584,693,296 144,642 64,929,844 42.25
497 Philippine flying lemur (mCynVol1 alternate hap 2022) Cynocephalus volans GCA_027409165.1_mCynVol1.alt 1,750 2,453,279,509 0 0 39.54
498 Philippine flying lemur (primary hap 2022 genbank) Cynocephalus volans GCA_027409185.1_mCynVol1.pri 131 2,814,434,834 116 32,500 39.52
499 Philippine flying lemur (primary hap 2022 refseq) Cynocephalus volans GCF_027409185.1_mCynVol1.pri 130 2,814,418,120 116 32,500 39.52
500 pig (Bamei 2023) Sus scrofa GCA_030704935.1_ASM3070493v1 379 2,671,498,991 878 439,000 40.58
501 pig (Duroc 2017) Sus scrofa GCF_000003025.6_Sscrofa11.1 613 2,501,912,388 544 29,864,684 45.16
502 pig (Norwegian landrace 2024) Sus scrofa GCA_963921485.1_norwegian_landrace 54 2,633,804,377 0 0 39.60
503 pig (USMARCv1 2017) Sus scrofa GCA_002844635.1_USMARCv1.0 14,157 2,755,438,182 661 132,307,944 45.28
504 pig (Wuzhishan WZS1 2025) Sus scrofa GCA_048338725.1_T2T_pig1.0 20 2,633,166,191 0 0 39.57
505 plains zebra (Etosha38 2022 UCLA) Equus quagga GCF_021613505.1_UCLA_HA_Equagga_1.0 11,098 2,496,156,151 14,595 23,941,376 38.38
506 platypus (alternate hap Pmale09 2020) Ornithorhynchus anatinus GCA_004115175.2_mOrnAna1.alt.v3 5,843 1,575,252,831 25 5,525 51.65
507 platypus (Pmale09 v4 2020) Ornithorhynchus anatinus GCF_004115215.2_mOrnAna1.pri.v4 322 1,859,281,927 515 15,158,118 50.98
508 polar bear (Baiyulong BGI 2014 refseq) Ursus maritimus GCF_000687225.1_UrsMar_1.0 23,819 2,301,379,344 110,343 38,357,410 39.53
509 polar bear (UCSC 2021) Ursus maritimus GCF_017311325.1_ASM1731132v1 3,900 2,330,485,441 45,532 9,481,082 40.62
510 prairie deer mouse (Baylor 2013) Peromyscus maniculatus bairdii GCF_000500345.1_Pman_1.0 30,921 2,630,541,020 182,263 157,004,803 30.10
511 prairie deer mouse (Harvard 2020) Peromyscus maniculatus bairdii GCF_003704035.1_HU_Pman_2.1.3 8,524 2,512,439,762 147,442 124,546,479 29.88
512 prairie vole Microtus ochrogaster GCF_000317375.1_MicOch1.0 6,335 2,287,340,943 180,677 183,019,268 27.36
513 proboscis bat (hap1 2024) Rhynchonycteris naso GCA_037038545.1_mRhyNas2.hap1 41 2,455,066,473 68 10,600 41.49
514 proboscis bat (hap2 2024) Rhynchonycteris naso GCA_037038555.1_mRhyNas2.hap2 38 2,296,372,838 39 7,000 40.66
515 pronghorn (PH2016 2021) Antilocapra americana GCA_021018645.1_ASM2101864v1 66,453 2,669,373,955 74,027 84,658,785 34.68
516 Przewalski's horse (Burgud 2014 refseq) Equus przewalskii GCF_000696695.1_Burgud 53,097 2,395,954,271 80,963 21,135,449 40.20
517 Przewalski's horse (Varuska primary hap 2024) Equus przewalskii GCF_037783145.1_EquPr2 2,146 2,499,640,368 310 30,911 39.88
518 puma (L17-30 alternate hap 2023) Puma concolor GCA_028749965.1_mPumCon1.0.hap2 208 2,496,324,563 96 9,600 35.10
519 puma (L17-30 primary hap 2023) Puma concolor GCA_028749985.1_mPumCon1.0.hap1 256 2,373,442,513 134 13,400 34.72
520 puma (SC36_Marlon 2018 refseq) Puma concolor GCF_003327715.1_PumCon1.0 2,175 2,432,966,684 178,992 114,069,938 40.74
521 punctate agouti Dasyprocta punctata GCA_004363535.1_DasPun_v1_BIUU 986,664 3,012,098,298 6,459 645,900 36.59
522 pygmy sperm whale Kogia breviceps GCA_004363705.1_KogBre_v1_BIUU 1,252,072 2,759,698,159 6,053 605,300 43.68
523 pygmy sperm whale (haplotype 1 2022 refseq) Kogia breviceps GCF_026419965.1_mKogBre1_haplotype_1 581 2,555,855,246 143 4,797,769 39.97
524 pygmy sperm whale (mKogBre1 haplotype 2 2022) Kogia breviceps GCA_026419985.1_mKogBre1_haplotype_2 391 2,613,416,393 138 319,582 41.60
525 Pyrenean desman (IBE-C5619 2021) Galemys pyrenaicus GCA_019455555.1_Gpyr_1.0 12,306 1,828,347,170 63,679 27,224,426 28.06
526 rabbit (A946 2020) Oryctolagus cuniculus cuniculus GCA_013371645.1_OryCun3.0 1,091 2,780,373,160 4,254 2,127,000 44.82
527 rabbit (New Zealand White DNA-2018 2021 refseq) Oryctolagus cuniculus GCF_009806435.1_UM_NZW_1.0 3,160 2,841,507,030 18,178 65,881,331 39.77
528 rabbit (primary hap 2024 refseq) Oryctolagus cuniculus GCF_964237555.1_mOryCun1.1 221 2,804,657,419 2,276 455,200 41.73
529 rabbit (Thorbecke 2009 Broad refseq) Oryctolagus cuniculus GCF_000003625.3_OryCun2.0 3,241 2,737,462,810 80,789 133,467,217 42.57
530 raccoon dog (2021) Nyctereutes procyonoides GCF_905146905.1_NYPRO_anot_genome 811 2,387,097,583 70 499,771 32.97
531 Rambouillet sheep (Baylor 2017) Ovis aries GCF_002742125.1_Oar_rambouillet_v1.0 2,641 2,869,914,396 4,847 383,065 47.40
532 Rambouillet sheep (U.Idaho 2021) Ovis aries GCF_016772045.1_ARS-UI_Ramb_v2.0 142 2,628,146,905 84 42,000 46.86
533 ratel Mellivora capensis GCA_004024625.1_MelCap_v1_BIUU 2,068,312 3,091,173,380 6,511 651,100 41.96
534 red bat Lasiurus borealis GCA_004026805.1_LasBor_v1_BIUU 518,900 2,857,590,849 6,380 638,000 39.98
535 red deer (2021) Cervus elaphus GCF_910594005.1_mCerEla1.1 144 2,886,603,524 40 10,400 44.67
536 red deer (alternate hap 2021) Cervus elaphus GCA_910593805.1_mCerEla1.1_alternate_haplotype 4,021 2,903,978,491 22 11,000 50.27
537 red fox (BD-2025 2025) Vulpes vulpes GCF_048418805.1_VulVul3 289 2,395,584,468 104 20,101 33.14
538 red fox (hap1 2024) Vulpes vulpes GCA_964106825.2_mVulVul1.hap1.2 461 2,411,727,275 1,845 369,000 33.01
539 red fox (hap2 2024) Vulpes vulpes GCA_964106925.2_mVulVul1.hap2.2 350 2,398,532,178 1,819 363,800 33.10
540 red fox (tameXaggressive cross 2018) Vulpes vulpes GCF_003160815.1_VulVul2.2 82,424 2,421,568,072 246,167 71,714,148 39.64
541 reed vole (MF-2015 2020) Alexandromys fortis GCF_014885135.2_M_Fortis_MF-2015_v1.1 10,460 2,189,376,753 67,118 96,436,015 28.49
542 Reeves' muntjac (alternate hap 2024) Muntiacus reevesi GCA_963930665.1_mMunRee1.1_alternate_haplotype 8,892 2,863,788,737 0 0 48.30
543 Reeves' muntjac (primary hap 2024) Muntiacus reevesi GCF_963930625.1_mMunRee1.1 267 2,656,168,540 682 136,400 39.90
544 reindeer (2023) Rangifer tarandus GCA_963422255.1_RTA_final 127,879 2,663,342,264 131,886 44,040,815 36.18
545 reindeer (US061 2019) Rangifer tarandus GCA_004026565.1_RanTarSib_v1_BIUU 1,360,739 2,897,299,934 4,769 476,900 46.12
546 Rice's whale (hap1 2023) Balaenoptera ricei GCA_028017805.1_mBalRic1.hap1 1,039 2,844,045,133 131 62,437,235 42.12
547 Rice's whale (hap2 2023 refseq) Balaenoptera ricei GCF_028023285.1_mBalRic1.hap2 774 2,678,442,663 334 2,621,494 41.09
548 Rickett's big-footed myotis (AB-2021 2024) Myotis pilosus GCA_036010255.1_ASM3601025v1 105 2,000,337,603 0 0 36.26
549 Risso's dolphin (hap1.1 2024) Grampus griseus GCA_964374135.1_mGraGri1.hap1.1 1,146 2,667,081,928 1,138 227,600 43.58
550 Risso's dolphin (hap2.1 2024) Grampus griseus GCA_964374185.1_mGraGri1.hap2.1 1,062 2,403,961,738 1,073 214,600 43.57
551 Ryukyu mouse (v2 2017) Mus caroli GCF_900094665.2_CAROLI_EIJ_v1.1 3,077 2,552,825,103 306,599 280,223,092 31.97
552 Saanen dairy goat Capra hircus GCA_015443085.1_Saanen_v1 1,362 2,696,218,280 170 61,701 47.61
553 saddleback dolphin (alternate hap 2023) Delphinus delphis GCA_949987525.1_mDelDel1.1_alternate_haplotype 7,426 2,440,532,866 1 31 40.32
554 saddleback dolphin (v1 primary hap 2023 refseq) Delphinus delphis GCF_949987515.1_mDelDel1.1 630 2,663,516,986 968 193,431 42.65
555 saddleback dolphin (v2 primary hap 2024 refseq) Delphinus delphis GCF_949987515.2_mDelDel1.2 630 2,663,516,986 968 193,431 42.65
556 saiga antelope Saiga tatarica GCA_004024985.1_SaiTat_v1_BIUU 1,772,199 2,876,186,568 2,867 286,700 49.45
557 Schreibers' long-fingered bat (v2 hap1 2025) Miniopterus schreibersii GCA_964146895.2_mMinSch1.hap1.2 186 1,850,590,334 140 28,000 34.45
558 Schreibers' long-fingered bat (v2 hap2 2025) Miniopterus schreibersii GCA_964145185.2_mMinSch1.hap2.2 168 1,699,631,453 86 17,200 33.74
559 Schreibers' long-fingered bat (US075 2019) Miniopterus schreibersii GCA_004026525.1_MinSch_v1_BIUU 177,620 1,775,846,775 6,918 691,800 29.69
560 scimitar-horned oryx Oryx dammah GCF_014754425.2_SCBI_Odam_1.1 9,089 2,707,182,720 16,241 18,916,020 46.45
561 Screaming hairy armadillo Chaetophractus vellerosus GCA_004027955.1_ChaVel_v1_BIUU 7,677,333 5,335,596,729 2,747 274,700 47.68
562 sea otter (GAN:26980312 2017 refseq) Enhydra lutris kenyoni GCF_002288905.1_ASM228890v2 6,768 2,455,105,646 23,134 29,682,816 40.97
563 Seba's short-tailed bat Carollia perspicillata GCA_004027735.1_CarPer_v1_BIUU 1,925,339 2,689,411,905 3,864 386,400 32.01
564 sei whale (hap1.1 2025) Balaenoptera borealis GCA_965194805.1_mBalBor1.hap1.1 2,572 3,234,573,494 1,179 235,800 50.48
565 sei whale (hap2.1 2025) Balaenoptera borealis GCA_965194725.1_mBalBor1.hap2.1 1,851 2,988,821,750 1,066 213,200 46.53
566 sheep (hu hu3095 2024) Ovis aries GCA_040805955.1_T2T-sheep1.0 28 2,853,626,077 0 0 44.11
567 sheep (OAR_USU_Benz2616 2023) Ovis aries GCF_016772045.2_ARS-UI_Ramb_v3.0 143 2,654,063,983 84 42,000 40.63
568 sheep (Texel 2015) Ovis aries GCA_000298735.2_Oar_v4.0 5,465 2,615,499,683 44,566 28,008,926 45.67
569 shrew mouse Mus pahari GCF_900095145.1_PAHARI_EIJ_v1.1 2,581 2,475,012,951 269,643 235,052,033 34.77
570 Siberian hamster (SSSS 2022) Phodopus sungorus GCA_023856395.1_Psun_UM_1.1 7,756 2,119,204,330 88,601 7,863,181 29.22
571 Siberian musk deer (BS20 2019 Broad) Moschus moschiferus GCA_004024705.1_MosMos_v1_BIUU 1,175,703 2,966,355,811 19,764 1,976,400 49.78
572 small Madagascar hedgehog Echinops telfairi GCF_000313985.2_ASM31398v2 7,490 2,947,119,619 270,406 341,923,468 32.24
573 smoky shrew (2023) Sorex fumeus GCF_029834395.1_SorFum_2.1 497 2,873,555,620 0 0 48.22
574 snow leopard (11264 2022) Panthera uncia GCF_023721935.1_Puncia_PCG_1.0 2,636 2,433,989,369 23,786 17,131,389 34.73
575 snowshoe hare Lepus americanus GCA_004026855.1_LepAme_v1_BIUU 1,592,829 3,123,271,264 10,153 1,015,300 43.25
576 social tuco-tuco Ctenomys sociabilis GCA_004027165.1_CteSoc_v1_BIUU 807,571 2,834,814,551 16,191 1,619,100 38.40
577 soprano pipistrelle (alternate hap 2023) Pipistrellus pygmaeus GCA_949987765.1_mPipPyg2.1_alternate_haplotype 2,716 1,764,844,953 1 17 36.36
578 soprano pipistrelle (primary hap 2023) Pipistrellus pygmaeus GCA_949987585.1_mPipPyg2.1 243 1,895,125,685 161 32,017 37.73
579 South African ground squirrel Xerus inauris GCA_004024805.1_XerIna_v1_BIUU 577,370 2,601,418,404 9,745 974,500 34.95
580 Southeastern Asian house mouse (2016) Mus musculus castaneus GCA_001624445.1_CAST_EiJ_v1 2,977 2,653,990,650 424,005 367,109,054 34.43
581 Southeastern Asian house mouse (2022) Mus musculus castaneus GCA_921999005.2_CAST_EiJ_v3 147 2,519,863,764 278 20,418,215 40.16
582 Southeastern Asian house mouse (T2T 2024) Mus musculus castaneus GCA_964188545.1_CAST_EiJ_T2T_v1 338 2,950,550,120 78 3,015,303 47.79
583 southern elephant seal Mirounga leonina GCF_011800145.1_KU_Mleo_1.0 1,115 2,417,320,305 22,850 15,584,573 43.51
584 southern grasshopper mouse (2020) Onychomys torridus GCF_903995425.1_mOncTor1.1 2,949 2,468,394,440 2,143 26,162,626 32.74
585 southern multimammate mouse Mastomys coucha GCF_008632895.1_UCSF_Mcou_1 28 2,507,184,835 146,713 203,565,473 35.43
586 southern tamandua (mTamTet1 alternate hap 2022) Tamandua tetradactyla GCA_023853755.1_mTamTet1.alt 7,862 2,898,984,517 4 713 39.97
587 southern tamandua (mTamTet1 primary hap 2022) Tamandua tetradactyla GCA_023851605.1_mTamTet1.pri 201 3,205,741,135 961 17,897,414 45.80
588 southern three-banded armadillo Tolypeutes matacus GCA_004025125.1_TolMat_v1_BIUU 2,925,507 4,115,028,163 15,801 1,580,100 43.97
589 southern two-toed sloth (mChoDid1 alternate hap 2020) Choloepus didactylus GCA_015220265.1_mChoDid1.alt 11,980 3,180,649,806 70 76,707 40.66
590 southern two-toed sloth (mChoDid1 primary hap 2020) Choloepus didactylus GCF_015220235.1_mChoDid1.pri 146 3,214,702,648 1,243 80,992,407 40.51
591 southern white rhinoceros (SDZICR_KB13650 2012 refseq) Ceratotherium simum simum GCF_000283155.1_CerSimSim1.0 3,087 2,464,367,180 54,737 97,509,168 28.94
592 Sowerby's beaked whale (hap1 2024) Mesoplodon bidens GCA_964165515.1_mMesBid2.hap1.1 1,602 2,999,098,505 1,095 219,000 45.32
593 Sowerby's beaked whale (hap2 2024) Mesoplodon bidens GCA_964148845.1_mMesBid2.hap2.1 1,152 2,732,770,104 974 194,800 43.69
594 Sowerby's beaked whale (US080 2019) Mesoplodon bidens GCA_004027085.1_MesBid_v1_BIUU 1,801,720 2,797,694,783 8,597 859,700 45.06
595 sperm whale (SW-GA 2023) Physeter macrocephalus GCF_002837175.3_ASM283717v5 12,169 2,496,225,537 121,387 104,912,766 34.93
596 spotted-tailed quoll (Chaos hap1 2025) Dasyurus maculatus GCA_048593285.1_ASM4859328v1 6 3,043,210,118 151 916,301 41.99
597 spotted-tailed quoll (Chaos hap2 2025) Dasyurus maculatus GCA_048593245.1_ASM4859324v1 6 3,066,144,370 118 449,543 42.02
598 star-nosed mole Condylura cristata GCF_000260355.1_ConCri1.0 2,038 1,769,657,897 82,557 87,115,890 26.03
599 Steller sea lion Eumetopias jubatus GCF_004028035.1_ASM402803v1 7,222 2,417,469,577 18,994 14,214,605 43.31
600 Stephens's kangaroo rat Dipodomys stephensi GCA_004024685.1_DipSte_v1_BIUU 1,269,643 2,346,418,196 8,882 888,200 44.35
601 steppe mouse (ZRU 2018) Mus spicilegus GCA_003336285.1_MUSP714 37,536 2,496,083,520 123,681 105,748,500 40.63
602 Stoliczka's trident bat (China 2021113_DDA primary hap 2024) Aselliscus stoliczkanus GCA_043727835.1_ASM4372783v1 75 2,268,696,503 87 28,868 40.53
603 straw-colored fruit bat Eidolon helvum GCA_000465285.1_ASM46528v1 133,538 1,837,754,460 154,908 7,319,795 32.82
604 stripe-headed round-eared bat Tonatia bakeri GCA_004024845.1_TonSau_v1_BIUU 249,810 2,105,886,965 2,860 286,000 30.52
605 striped dolphin (alternate hap 2023) Stenella coeruleoalba GCA_951394445.1_mSteCoe1.1_alternate_haplotype 3,464 2,485,529,352 0 0 40.98
606 striped dolphin (primary hap 2023) Stenella coeruleoalba GCA_951394435.1_mSteCoe1.1 638 2,691,423,227 993 198,431 43.09
607 striped hyena (BS54 2019 Broad) Hyaena hyaena GCA_004023945.1_HyaHya_v1_BIUU 350,223 2,445,474,026 11,849 1,184,900 42.43
608 striped hyena (Hyena2069 2018 Potsdam U) Hyaena hyaena GCF_003009895.1_ASM300989v1 5,761 2,374,733,219 23,058 16,792,966 41.62
609 sugar glider (PSGF00001 2023) Petaurus breviceps papuanus GCA_028583685.1_PetGlider_PUasm1.0 1,895 3,464,704,272 85,933 65,323,479 39.85
610 sugar glider (PSGF00001 2023) Petaurus breviceps papuanus GCF_028583685.1_PetGlider_PUasm1.0 1,896 3,464,720,375 85,933 65,323,479 39.85
611 Sumatran rhinoceros (Ipuh 2017) Dicerorhinus sumatrensis sumatrensis GCA_002844835.1_ASM284483v1 1,061,589 2,949,863,658 50,876 129,781,408 38.17
612 Sumatran serow (serow.1 2024) Capricornis sumatraensis GCF_032405125.1_serow.2 159 2,828,283,278 6 1,200 44.38
613 Sunda flying lemur (2014 WashU) Galeopterus variegatus GCF_000696425.1_G_variegatus-3.0.2 179,514 3,187,660,572 412,608 384,823,142 33.76
614 Sunda flying lemur (US047 2019 Broad) Galeopterus variegatus GCA_004027255.1_GalVar_v1_BIUU 1,649,747 3,225,624,221 5,895 589,500 38.66
615 tailed tailless bat Anoura caudifer GCA_004027475.1_AnoCau_v1_BIUU 337,255 2,206,589,520 4,640 464,000 32.74
616 takin (Tak-1 2022) Budorcas taxicolor GCF_023091745.1_Takin1.1 1,363 2,851,654,952 152 75,583 44.59
617 Talazac's shrew tenrec Nesogale talazaci GCA_004026705.1_MicTal_v1_BIUU 788,895 3,236,147,583 6,619 661,900 36.87
618 tammar wallaby (alternate hap 2023) Notamacropus eugenii GCA_028389975.1_mMacEug1.alt 14,283 1,837,738,679 2 62 38.42
619 tammar wallaby (Barry hap1 2025) Notamacropus eugenii GCA_048593335.1_ASM4859333v1 8 3,349,423,305 32 295 39.00
620 tammar wallaby (Barry hap2 2025) Notamacropus eugenii GCA_048593345.1_ASM4859334v1 8 3,250,186,738 16 129 38.97
621 tammar wallaby (v2 primary hap 2023 refseq) Notamacropus eugenii GCF_028372415.1_mMacEug1.pri_v2 272 3,447,464,908 515 6,550,697 39.54
622 Tasmanian devil (McLovin hap1 2025) Sarcophilus harrisii GCA_048593225.1_ASM4859322v1 7 3,244,907,618 1,514 16,414,496 42.27
623 Tasmanian devil (McLovin hap2 2025) Sarcophilus harrisii GCA_048593325.1_ASM4859332v1 6 3,116,321,655 2,578 27,801,768 41.45
624 Tasmanian devil (primary hap 2019) Sarcophilus harrisii GCF_902635505.1_mSarHar1.11 106 3,086,674,442 354 46,771 44.34
625 thirteen-lined ground squirrel (2021 HiC) Ictidomys tridecemlineatus GCF_016881025.1_HiC_Itri_2 7,132 2,478,965,571 146,412 167,892,170 33.26
626 Tibetan sand fox (lyu1992 2022) Vulpes ferrilata GCA_024500485.1_ASM2450048v1 234 2,379,658,649 145 34,117 33.00
627 tiger Panthera tigris GCF_018350195.1_P.tigris_Pti1_mat1.1 75 2,408,695,688 65 10,100 42.83
628 Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022) Corynorhinus townsendii GCA_026230055.1_mCorTow1.0.hap1 391 2,104,912,948 219 21,900 37.42
629 Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022) Corynorhinus townsendii GCA_026230045.1_mCorTow1.0.hap2 182 1,961,562,149 217 21,700 36.37
630 Transcaucasian mole vole Bramus lutescens GCA_001685075.1_ASM168507v1 58,423 2,353,188,398 440,846 93,278,981 27.55
631 trefoil horseshoe bat (Malaysia primary hap 2024) Rhinolophus trifoliatus GCA_043728145.1_ASM4372814v1 126 2,232,422,560 397 162,620 40.80
632 True's beaked whale (hap1.1 2024) Mesoplodon mirus GCA_964341445.1_mMesMir1.hap1.1 2,757 3,442,419,404 1,240 248,016 51.52
633 True's beaked whale (hap2.1 2024) Mesoplodon mirus GCA_964341485.1_mMesMir1.hap2.1 1,384 2,956,530,355 1,073 214,600 45.26
634 Upper Galilee mountains blind mole rat (2095 2014 refseq) Nannospalax galili GCF_000622305.1_S.galili_v1.0 154,976 3,061,424,619 201,121 147,976,214 36.23
635 Vancouver Island marmot (RANI-1049 2019) Marmota vancouverensis GCA_005458795.1_GSC_VIM_1.0 23,903 2,504,017,057 296,819 140,246,106 32.08
636 vaquita (alternate hap mPhoSin1 2019) Phocoena sinus GCA_008692045.1_mPhoSin1.alt 9,469 995,426,950 1 19 43.86
637 vaquita (mPhoSin1 2019) Phocoena sinus GCF_008692025.1_mPhoSin1.pri 64 2,371,524,154 212 8,045,651 44.14
638 water buffalo (Mediterranean 2018) Bubalus bubalis GCF_003121395.1_ASM312139v1 509 2,655,780,776 410 373,500 47.14
639 water buffalo (Murrah 2021) Bubalus bubalis GCF_019923935.1_NDDB_SH_1 26 2,622,460,639 659 65,900 47.14
640 Weddell seal (WS11-02 2013 refseq) Leptonychotes weddellii GCF_000349705.1_LepWed1.0 16,711 3,156,902,762 152,836 933,738,633 29.40
641 western European hedgehog (2012 refseq) Erinaceus europaeus GCF_000296755.1_EriEur2.0 5,803 2,715,720,925 219,764 382,647,390 42.03
642 western European hedgehog (alternate hap 2023) Erinaceus europaeus GCA_950295305.1_mEriEur2.1_alternate_haplotype 26,600 1,850,742,846 1 200 53.70
643 western European hedgehog (primary hap 2023 refseq) Erinaceus europaeus GCF_950295315.1_mEriEur2.1 1,174 2,720,683,831 3,760 752,000 54.51
644 western European house mouse (WSB_EiJ v3 2022) Mus musculus domesticus GCA_921998345.2_WSB_EiJ_v3 232 2,519,257,336 1,233 28,490,451 40.23
645 western roe deer (2023) Capreolus capreolus GCA_951849835.1_ETH_CapCap1 212 3,187,251,554 0 0 48.29
646 western spotted skunk Spilogale gracilis GCA_004023965.1_SpiGra_v1_BIUU 422,009 2,463,318,012 11,822 1,182,200 40.80
647 western wild mouse (SPRET_EiJ v3 2022) Mus spretus GCA_921997135.2_SPRET_EiJ_v3 139 2,546,544,102 1,576 12,584,765 41.12
648 whiskered bat (hap1 2024) Myotis mystacinus GCA_964094495.2_mMyoMys1.hap1.1 526 2,081,199,042 1,566 313,200 37.63
649 whiskered bat (hap2 2024) Myotis mystacinus GCA_964195625.1_mMyoMys1.hap2.1 327 1,943,289,057 1,414 282,815 36.81
650 white-beaked dolphin (alternate hap 2023) Lagenorhynchus albirostris GCA_949774935.1_mLagAlb1.1_alternate_haplotype 25,619 2,036,251,322 0 0 38.99
651 white-beaked dolphin (primary hap 2023 refseq) Lagenorhynchus albirostris GCF_949774975.1_mLagAlb1.1 410 2,544,835,795 1,070 214,000 39.75
652 white-footed mouse (LL stock 2020) Peromyscus leucopus GCF_004664715.2_UCI_PerLeu_2.1 1,857 2,475,180,836 2,299 1,128,385 33.00
653 white-tailed deer (Illinois 20LAN1187 2024) Odocoileus virginianus GCF_023699985.2_Ovbor_1.2 481 2,423,263,331 294 118,558 43.14
654 white-tailed deer (Pink-7 2017 refseq) Odocoileus virginianus texanus GCF_002102435.1_Ovir.te_1.0 17,026 2,380,505,687 107,058 21,568,183 40.94
655 white-toothed pygmy shrew (mSunEtr1 alternate hap 2022) Suncus etruscus GCA_024140225.1_mSunEtr1.alt.cur 14,815 1,515,382,512 26 820 45.74
656 white-toothed pygmy shrew (mSunEtr1 primary hap 2022) Suncus etruscus GCF_024139225.1_mSunEtr1.pri.cur 147 2,471,666,657 1,010 10,644,072 46.52
657 wild Bactrian camel (BCGSAC Cfer 1.0 YT-003-E 2020) Camelus ferus GCF_009834535.1_BCGSAC_Cfer_1.0 2,043 2,087,093,976 2,345 234,500 33.34
658 wild Bactrian camel (CB1 Naran 2013 refseq) Camelus ferus GCF_000311805.1_CB1 13,334 2,009,194,609 60,971 23,778,176 33.55
659 wild goat Capra aegagrus GCA_000978405.1_CapAeg_1.0 89,498 2,828,873,048 279,195 235,145,392 41.64
660 wild yak (GX-2022 2023) Bos mutus GCF_027580195.1_NWIPB_WYAK_1.1 2,040 2,626,917,182 196 19,501 46.98
661 wild yak (yakQH1 2013) Bos mutus GCF_000298355.1_BosGru_v2.0 41,192 2,645,161,911 192,006 120,154,638 44.01
662 woodchuck (v1.1 L192 2022) Marmota monax GCF_021218885.2_Marmota_monax_Labrador192_F-V1.1 3,333 2,638,791,045 47 4,700 43.23
663 woodland dormouse Graphiurus murinus GCA_004027655.1_GraMur_v1_BIUU 1,267,939 2,815,014,629 15,691 1,569,100 42.24
664 woodland thicket rat Grammomys surdaster GCF_004785775.1_NIH_TR_1.0 23,656 2,412,664,998 76,623 34,663,040 37.61
665 woolly hare (The Qinghai-Tibet Plateau SH-2023 2024) Lepus oiostolus GCA_036325905.1_CXZ 112 2,855,089,205 240 24,000 43.79
666 Yangtze finless porpoise (v2 wild 2018 refseq) Neophocaena asiaeorientalis asiaeorientalis GCF_003031525.2_Neophocaena_asiaeorientalis_V1.1 13,696 2,284,626,297 52,647 16,346,815 35.61
667 Yangtze River dolphin (v1.1 BGI 2013 refseq) Lipotes vexillifer GCF_000442215.2_Lipotes_vexillifer_v1.1 24,810 2,419,495,777 123,788 32,137,463 36.59
668 yellow-bellied marmot (SJ_83 v2.1 2019) Marmota flaviventris GCF_003676075.3_GSC_YBM_2.1 31,760 2,574,345,955 35,509 52,490,435 32.65
669 yellow-bellied marmot (hap1 2025 refseq) Marmota flaviventris GCF_047511675.1_mMarFla1.hap1 813 2,704,651,887 330 55,900 34.99
670 yellow-bellied marmot (hap2 2025) Marmota flaviventris GCA_047512175.1_mMarFla1.hap2 329 2,467,036,054 307 52,600 33.41
671 yellow-footed antechinus (v2 Samford, QLD, Australia AdamAnt 2021) Antechinus flavipes GCF_016432865.1_AdamAnt_v2 486 3,192,661,299 620 309,002 42.70
672 yellow-spotted hyrax Heterohyrax brucei GCA_004026845.1_HetBruBak_v1_BIUU 967,933 3,618,151,652 3,815 381,500 45.18
673 yellow-spotted hyrax (mHetBru1 2023) Heterohyrax brucei GCA_028571685.1_mHetBru1.pri 62 3,488,059,404 276 68,688 45.91
674 yellow-spotted hyrax (mHetBru1 alternate hap 2023) Heterohyrax brucei GCA_028571665.1_mHetBru1.alt 4,168 3,021,267,164 1 32 44.05
675 Yong Hoi Sen's woolly horseshoe bat (Malaysia 20210929_DDd primary hap 2024) Rhinolophus yonghoiseni GCA_043880425.1_ASM4388042v1 1,486 2,323,192,134 196 76,160 42.06
676 Yuma myotis (MYYU_CA2020_CCGP alternate hap 2023) Myotis yumanensis GCA_028536395.1_mMyoYum1.0.hap2 250 2,050,521,808 215 21,500 37.27
677 Yuma myotis (MYYU_CA2020_CCGP primary hap 2023 refseq) Myotis yumanensis GCF_028538775.1_mMyoYum1.0.hap1 475 1,952,483,305 209 20,900 38.53
678 zebu cattle (Hainan HN024 2024) Bos indicus GCA_039881165.1_ASM3988116v1 292 2,616,227,200 350 336,501 40.99
679 zebu cattle (Nelore 2014 refseq) Bos indicus GCF_000247795.1_Bos_indicus_1.0 32 2,673,965,444 6,941,272 204,955,425 43.27
680 zebu cattle (Sahiwal x Tharparkar maternal NIAB-ARS_2022 2023) Bos indicus GCF_029378745.1_NIAB-ARS_B.indTharparkar_mat_pri_1.0 67 2,663,005,763 283 28,300 46.66
TOTALS:total assembly count 680 108,274,218 1,734,565,811,864 41,170,244 26,463,871,652  

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 226 assemblies assembly stats track stats
Mammals 680 assemblies assembly stats track stats
Birds 433 assemblies assembly stats track stats
Fishes 493 assemblies assembly stats track stats
other vertebrates 314 assemblies assembly stats track stats
Invertebrates 1173 assemblies assembly stats track stats
Plants 316 assemblies assembly stats track stats
Fungi 921 assemblies assembly stats track stats
Viruses 421 assemblies assembly stats track stats
Bacteria 123 assemblies assembly stats track stats
legacy/superseded 588 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1300 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 96 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 982 assemblies assembly stats track stats