Birds Genomes assembly hubs

Assemblies from NCBI/Genbank/Refseq sources, subset of birds only.

How to view the assembly of interest

The links to the genome browser in the table below will attach that one specific assembly to the genome browser. Use the links in the column labeled common name and view in browser to view that assembly in the genome browser.

See also: assembly statistics, track statistics <== additional information for these assemblies.


Cite reference: To reference these resources in publications, please credit:

Clawson, H., Lee, B.T., Raney, B.J. et al. "GenArk: towards a million UCSC genome browsers.
Genome Biol 24, 217 (2023). https://doi.org/10.1186/s13059-023-03057-x

Data resource links

NOTE: Click on the column headers to sort the table by that column

The common name and view in browser will attach only that single assembly to the genome browser.
The scientific name and data download link provides access to the files for that one assembly hub.
The other links provide access to NCBI resources for these assemblies.
count common name and
view in UCSC browser
[IGV browser]
scientific name
and data download
NCBI assembly BioSample BioProject assembly date,
source link
1 Abyssinian ground-hornbill (alternate hap 2019)[IGV] Bucorvus abyssinicus GCA_009769595.1_bBucAby1.alt SAMN12614799 PRJNA561886 2019-12-19
2 Abyssinian ground-hornbill (primary hap 2019)[IGV] Bucorvus abyssinicus GCA_009769605.1_bBucAby1.pri SAMN12614799 PRJNA561887 2019-12-23
3 acorn woodpecker (bairdi alternate hap 2022)[IGV] Melanerpes formicivorus GCA_026170555.1_bMelFor1.0.a SAMN30523671 PRJNA875157 2022-11-14
4 acorn woodpecker (bairdi primary hap 2022 genbank)[IGV] Melanerpes formicivorus GCA_026170545.1_bMelFor1.0.p SAMN30523671 PRJNA875158 2022-11-14
5 acorn woodpecker (bairdi primary hap 2022 refseq)[IGV] Melanerpes formicivorus GCF_026170545.1_bMelFor1.0.p_v2 SAMN30523671 PRJNA875158 2022-11-14
6 Adelie penguin[IGV] Pygoscelis adeliae GCF_000699105.1_ASM69910v1 SAMN02596601 PRJNA235983 2014-06-06
7 African harrier-hawk (primary hap 2026)[IGV] Polyboroides typus GCA_060712505.1_bPolTyp1.1.rep SAMN36735487 PRJNA1469926 2026-09-01
8 African ostrich[IGV] Struthio camelus australis GCF_000698965.1_ASM69896v1 SAMN02316164 PRJNA212875 2014-06-06
9 African ostrich (BGI_N308 2014)[IGV] Struthio camelus australis GCA_000698965.1_ASM69896v1 SAMN02316164 PRJNA212875 2014-06-06
10 African ostrich (hap1 2024)[IGV] Struthio camelus GCF_040807025.1_bStrCam1.hap1 SAMN42123890 PRJNA1129091 2024-07-22
11 African ostrich (hap1 2024)[IGV] Struthio camelus GCA_040807025.1_bStrCam1.hap1 SAMN42123890 PRJNA1129091 2024-07-22
12 African ostrich (hap2 2024)[IGV] Struthio camelus GCA_040807015.1_bStrCam1.hap2 SAMN42123890 PRJNA1129092 2024-07-22
13 American crow[IGV] Corvus brachyrhynchos GCF_000691975.1_ASM69197v1 SAMN02297499 PRJNA212869 2014-06-02
14 American flamingo (alternate hap 2019)[IGV] Phoenicopterus ruber ruber GCA_009819805.1_bPhoRub2.alt SAMN12614931 PRJNA561889 2019-12-23
15 American flamingo (primary hap 2019)[IGV] Phoenicopterus ruber ruber GCA_009819775.1_bPhoRub2.pri SAMN12614931 PRJNA561888 2019-12-31
16 American goldfinch (hap1 2026)[IGV] Spinus tristis GCA_057381415.1_bSpiTri1.hap1 SAMN55284606 PRJNA1421035 2026-05-11
17 American goldfinch (hap2 2026)[IGV] Spinus tristis GCA_057381485.1_bSpiTri1.hap2 SAMN55284606 PRJNA1421036 2026-05-11
18 American kestrel (FMNH 100283 2023)[IGV] Falco sparverius GCA_034782035.1_ASM3478203v1 SAMN36994626 PRJNA959111 2023-12-28
19 American robin (hap1 2025)[IGV] Turdus migratorius GCA_052324695.1_bTurMig1.hap1 SAMN48528228 PRJNA1263561 2025-08-28
20 American robin (hap2 2025)[IGV] Turdus migratorius GCA_052324735.1_bTurMig1.hap2 SAMN48528228 PRJNA1263562 2025-08-28
21 Anna's hummingbird (alternate hap BGI_N300 2018)[IGV] Calypte anna GCA_003957575.1_bCalAnn1_v1.h SAMN02265252 PRJNA489140 2018-12-20
22 Anna's hummingbird (BGI_N300 2019 refseq)[IGV] Calypte anna GCF_003957555.1_bCalAnn1_v1.p SAMN02265252 PRJNA489139 2019-05-16
23 Arctic tern (hap1.1 2026)[IGV] Sterna paradisaea GCA_987197735.1_bStePaa1.hap1.1 SAMEA120960987 PRJEB122750 2026-09-08
24 bald eagle[IGV] Haliaeetus leucocephalus GCF_000737465.1_Haliaeetus_leucocephalus-4.0 SAMN02664716 PRJNA237821 2014-08-04
25 band-tailed pigeon (hap1 2025)[IGV] Patagioenas fasciata GCF_037038585.1_bPatFas1.hap1 SAMN40018840 PRJNA1078807 2025-02-07
26 band-tailed pigeon (v1 hap2 2024 refseq)[IGV] Patagioenas fasciata GCF_036971685.1_bPatFas1.hap2 SAMN40018840 PRJNA1078808 2024-03-06
27 band-tailed pigeon (v2 hap2 2025)[IGV] Patagioenas fasciata GCA_036971685.2_bPatFas1.hap2 SAMN40018840 PRJNA1078808 2025-02-10
28 bar-tailed godwit (hap1.1 2026)[IGV] Limosa lapponica GCA_987196075.1_bLimLap1.hap1.1 SAMEA120960972 PRJEB122722 2026-09-08
29 bar-tailed trogon[IGV] Apaloderma vittatum GCF_000703405.1_ASM70340v1 SAMN02318033 PRJNA212878 2014-06-16
30 barn owl (U. Lausanne 2021)[IGV] Tyto alba GCF_018691265.1_T.alba_DEE_v4.0 SAMN17526497 PRJNA694551 2021-06-03
31 Barn swallow (bHirRus1 v3 alternate hap 2021)[IGV] Hirundo rustica GCA_015227815.3_bHirRus1.alt.v3 SAMN14675488 PRJNA636191 2021-11-24
32 barn swallow (v3 primary hap 2021 refseq)[IGV] Hirundo rustica GCF_015227805.2_bHirRus1.pri.v3 SAMN14675488 PRJNA636192 2021-11-30
33 barnacle goose (hap1.1 2025)[IGV] Branta leucopsis GCA_965642265.1_bBraLeu2.hap1.1 SAMEA112468032 PRJEB93762 2025-07-19
34 Bengalese finch[IGV] Lonchura striata GCF_005870125.1_lonStrDom2 SAMN11521339 PRJNA369279 2019-06-05
35 Bengalese finch (primary hap 2025)[IGV] Lonchura striata GCA_050655825.1_ASM5065582v1 SAMN47007390 PRJNA1228306 2025-06-02
36 bird A.albertisi (hap1 2024)[IGV] Aegotheles albertisi GCA_039906565.1_bAegAlb1.hap1 SAMN41085506 PRJNA1104699 2024-05-31
37 bird A.albertisi (hap2 2024)[IGV] Aegotheles albertisi GCA_039906465.1_bAegAlb1.hap2 SAMN41085506 PRJNA1104700 2024-05-30
38 bird A.imberbis (Cuckoo-Finch-1a 21T00152 2023)[IGV] Anomalospiza imberbis GCF_031753505.1_ASM3175350v1 SAMN34535673 PRJNA966150 2023-09-22
39 bird E.chinensis (hap1 2024)[IGV] Excalfactoria chinensis GCA_039878515.1_bCotChi1.hap1 SAMN41253798 PRJNA1108769 2024-05-29
40 bird E.chinensis (hap2 2024)[IGV] Excalfactoria chinensis GCA_039878825.1_bCotChi1.hap2 SAMN41253798 PRJNA1108770 2024-05-31
41 bird P.flaviventris (CSIRO_AGI_PZ_B2104156 2023)[IGV] Pezoporus flaviventris GCF_033815535.1_CSIRO_AGI_Pfla_v1 SAMN38123840 PRJNA1036367 2023-11-20
42 bird Z.leucophrys gambelii (GWCS_2022_RI 2023)[IGV] Zonotrichia leucophrys gambelii GCF_028769735.1_RI_Zleu_2.0 SAMN31812169 PRJNA889240 2023-12-27
43 black swan (v2 Queensland, Australia AKBS03 2022)[IGV] Cygnus atratus GCF_013377495.2_CAtr_DNAZoo_HiC_assembly SAMN15332785 PRJNA640810 2022-08-03
44 black-capped chickadee (hap1 2023 genbank)[IGV] Poecile atricapillus GCA_030490865.1_bPoeAtr1.hap1 SAMN35074507 PRJNA972429 2023-07-18
45 black-capped chickadee (hap1 2023 refseq)[IGV] Poecile atricapillus GCF_030490865.1_bPoeAtr1.hap1 SAMN35074507 PRJNA972429 2023-07-18
46 black-capped chickadee (hap2 2023)[IGV] Poecile atricapillus GCA_030490855.1_bPoeAtr1.hap2 SAMN35074507 PRJNA972430 2023-07-18
47 black-headed gull (alternate hap 2024)[IGV] Chroicocephalus ridibundus GCA_963924255.1_bChrRid1.1_alternate_haplotype SAMEA112468038 PRJEB71950 2024-01-20
48 black-headed gull (Kunming 2023)[IGV] Chroicocephalus ridibundus GCA_030820635.1_KIZ_Lrid_1.0 SAMN36812646 PRJNA1001583 2023-08-18
49 black-headed gull (primary hap 2024 genbank)[IGV] Chroicocephalus ridibundus GCA_963924245.1_bChrRid1.1 SAMEA112468038 PRJEB71951 2024-01-20
50 black-headed gull (primary hap 2024 refseq)[IGV] Chroicocephalus ridibundus GCF_963924245.1_bChrRid1.1 SAMEA112468038 PRJEB71951 2024-01-20
51 black-legged kittiwake (bRisTri1 2023 refseq)[IGV] Rissa tridactyla GCF_028500815.1_bRisTri1.patW.cur.20221130 SAMN32104255 PRJNA909853 2023-02-09
52 black-legged kittiwake (bRisTri1.mat 2023)[IGV] Rissa tridactyla GCA_028501385.1_bRisTri1.mat.cur.20221130 SAMN32104255 PRJNA909854 2023-02-10
53 black-tailed godwit (hap1.1 2026)[IGV] Limosa limosa GCA_987270375.1_bLimLim1.hap1.1 SAMEA118427550 PRJEB123328 2026-09-08
54 black-throated flowerpiercer[IGV] Diglossa brunneiventris GCA_019023105.1_LSU_DiBr_2.0 SAMN17308174 PRJNA629984 2021-06-24
55 blackcap (alternate hap 2019)[IGV] Sylvia atricapilla GCA_009819715.1_bSylAtr1.alt SAMN12369542 PRJNA558065 2019-12-23
56 blackcap (primary hap 2019 refseq)[IGV] Sylvia atricapilla GCF_009819655.1_bSylAtr1.pri SAMN12369542 PRJNA558064 2019-12-31
57 blue jay (hap1 2024)[IGV] Cyanocitta cristata GCA_046129655.1_bCyaCrs1.hap1 SAMN44574712 PRJNA1181931 2024-12-18
58 blue jay (hap2 2024)[IGV] Cyanocitta cristata GCA_046129645.1_bCyaCrs1.hap2 SAMN44574712 PRJNA1181932 2024-12-17
59 blue tit[IGV] Cyanistes caeruleus GCF_002901205.1_cyaCae2 SAMN03734925 PRJNA284903 2018-01-26
60 blue tit (hap1.1 2025 genbank)[IGV] Cyanistes caeruleus GCA_971803275.1_bCyaCae1.hap1.1 SAMEA115433025 PRJEB96090 2025-09-13
61 blue tit (hap1.1 2025 refseq)[IGV] Cyanistes caeruleus GCF_971803275.1_bCyaCae1.hap1.1 SAMEA115433025 PRJEB96090 2025-09-13
62 blue tit (hap2.1 2025)[IGV] Cyanistes caeruleus GCA_971808865.1_bCyaCae1.hap2.1 SAMEA115433025 PRJEB96091 2025-09-13
63 blue-and-yellow macaw (hap1 2023)[IGV] Ara ararauna GCA_028858755.1_bAraAra1.hap1 SAMN33059336 PRJNA931362 2023-02-24
64 blue-and-yellow macaw (hap2 2023)[IGV] Ara ararauna GCA_028858555.1_bAraAra1.hap2 SAMN33059336 PRJNA931363 2023-02-24
65 blue-crowned manakin[IGV] Lepidothrix coronata GCF_001604755.1_Lepidothrix_coronata-1.0 SAMN04274560 PRJNA300662 2016-03-31
66 blue-fronted amazon (AMXYW 2021)[IGV] Amazona aestiva GCA_017639355.1_Aaes_hic SAMN17376699 PRJNA679636 2021-03-30
67 blue-fronted amazon (FVVF132 2015)[IGV] Amazona aestiva GCA_001420675.1_ASM142067v1 SAMN04014659 PRJNA294082 2015-10-30
68 blue-mantled thornbill (YG032_03hap1 2025)[IGV] Chalcostigma stanleyi GCA_054051245.1_bChaSta1.hap1 SAMN47932058 PRJNA1250157 2025-12-17
69 blue-mantled thornbill (YG032_03hap2 2025)[IGV] Chalcostigma stanleyi GCA_054051235.1_bChaSta1.hap2 SAMN47932058 PRJNA1250156 2025-12-17
70 bluethroat (hap2 2026)[IGV] Luscinia svecica GCA_965655245.2_bLusSve1.2.hap2 SAMEA118366426 PRJEB90385 2026-03-25
71 Bourke's parrot (Australia Nb327-2 2023)[IGV] Neopsephotus bourkii GCF_033783945.1_CSIRO-AGI_Nbou_v1 SAMN37631362 PRJNA1022850 2023-11-17
72 Brazilian merganser (hap1 2024)[IGV] Mergus octosetaceus GCA_036873955.1_bMerOct1.hap1 SAMN39710078 PRJNA1072166 2024-02-26
73 Brazilian merganser (hap2 2024)[IGV] Mergus octosetaceus GCA_036850655.1_bMerOct1.hap2 SAMN39710078 PRJNA1072165 2024-02-26
74 bronzed cowbird (106 2024)[IGV] Molothrus aeneus GCF_037042795.1_BPBGC_Maene_1.0 SAMN38454154 PRJNA1045801 2024-03-07
75 brown eared-pheasant[IGV] Crossoptilon mantchuricum GCA_019593555.1_cma1 SAMN15899056 PRJNA659158 2021-08-13
76 brown headed cowbird (v1.1 BHLD 08-10-18 2022)[IGV] Molothrus ater GCF_012460135.2_BPBGC_Mater_1.1 SAMN14074414 PRJNA606972 2022-10-11
77 brown kiwi[IGV] Apteryx mantelli mantelli GCF_001039765.1_AptMant0 SAMEA2560515 PRJEB6383 2015-06-21
78 brown roatelo[IGV] Mesitornis unicolor GCF_000695765.1_ASM69576v1 SAMN02339298 PRJNA212899 2014-06-02
79 brown-headed cowbird (hap1 2026)[IGV] Molothrus ater GCA_057560355.1_bMolAte1.hap1 SAMN54596572 PRJNA1402454 2026-05-15
80 brown-headed cowbird (hap2 2026)[IGV] Molothrus ater GCA_057657745.1_bMolAte1.hap2 SAMN54596572 PRJNA1402455 2026-05-15
81 budgerigar (maternal 2020)[IGV] Melopsittacus undulatus GCA_012275265.1_bMelUnd1.mat SAMN12623090 PRJNA561964 2020-04-13
82 budgerigar (maternal Z 2020 refseq)[IGV] Melopsittacus undulatus GCF_012275295.1_bMelUnd1.mat.Z SAMN12623090 PRJNA612327 2020-04-13
83 budgerigar (paternal hap 2020)[IGV] Melopsittacus undulatus GCA_012275275.1_bMelUnd1.pat SAMN12623090 PRJNA561963 2020-04-13
84 budgerigar (v6.3 2021 WashU)[IGV] Melopsittacus undulatus GCF_000238935.1_Melopsittacus_undulatus_6.3 SAMN02981360 PRJNA72527 2012-01-02
85 burrowing owl[IGV] Athene cunicularia GCF_003259725.1_athCun1 SAMN08961563 PRJNA431202 2018-06-21
86 California black rail (168171201 alternate hap 2022)[IGV] Laterallus jamaicensis coturniculus GCA_022605925.1_bLatJam1.0.a SAMN24505262 PRJNA794173 2022-03-17
87 California black rail (168171201 primary hap 2022)[IGV] Laterallus jamaicensis coturniculus GCA_022605575.1_bLatJam1.0.p SAMN24505262 PRJNA794174 2022-03-17
88 California condor (v2 813 2022 refseq)[IGV] Gymnogyps californianus GCF_018139145.2_ASM1813914v2 SAMN18477433 PRJNA718609 2022-09-01
89 California quail (MVZ:Bird:193975 alternate hap 2022)[IGV] Callipepla californica brunnescens GCA_023055725.1_bCalCai1.0.a SAMN26894057 PRJNA819181 2022-04-19
90 California quail (MVZ:Bird:193975 primary hap 2022)[IGV] Callipepla californica brunnescens GCA_023055505.1_bCalCai1.0.p SAMN26894057 PRJNA819182 2022-05-05
91 California towhee (CALT 2023)[IGV] Melozone crissalis GCF_028551555.1_PUWL_Pcris_2 SAMN32379461 PRJNA915193 2023-02-08
92 Canada goose (alternate hap 2025)[IGV] Branta canadensis GCA_965231325.1_bBraCan1.1_alternate_haplotype SAMEA113398965 PRJEB87681 2025-03-28
93 Canada goose (primary hap 2025 genbank)[IGV] Branta canadensis GCA_965231335.1_bBraCan1.1 SAMEA113398965 PRJEB87680 2025-03-29
94 Canada goose (primary hap 2025 refseq)[IGV] Branta canadensis GCF_965231335.1_bBraCan1.1 SAMEA113398965 PRJEB87680 2025-03-29
95 Canada goose (SJ_97 2019)[IGV] Branta canadensis GCA_006130075.1_GSC_cangoose_1.0 SAMN11031539 PRJNA524684 2019-06-05
96 carmine bee-eater (alternate hap 2019)[IGV] Merops nubicus GCA_009819585.1_bMerNub1.alt SAMN12621035 PRJNA561895 2019-12-23
97 carmine bee-eater (primary hap 2019)[IGV] Merops nubicus GCA_009819595.1_bMerNub1.pri SAMN12621035 PRJNA561894 2019-12-31
98 carrion crow (hap1.1 2026)[IGV] Corvus corone GCA_987196955.1_bCorCoo1.hap1.1 SAMEA118680279 PRJEB122710 2026-09-08
99 Cetti's warbler (hap1.1 2026)[IGV] Cettia cetti GCA_988281345.1_bCetCet1.hap1.1 SAMEA117632791 PRJEB126638 2026-09-17
100 chaffinch (alternate hap 2023)[IGV] Fringilla coelebs GCA_963513985.1_bFriCoe1.1_alternate_haplotype SAMEA9359753 PRJEB66367 2023-09-28
101 chaffinch (primary hap 2023)[IGV] Fringilla coelebs GCA_963513975.1_bFriCoe1.1 SAMEA9359753 PRJEB66368 2023-09-28
102 chestnut-breasted malkoha (KB17595 2023)[IGV] Phaenicophaeus curvirostris GCF_032191515.1_BPBGC_Pcur_1.0 SAMN35709878 PRJNA982538 2023-09-29
103 chicken (Cobb bGalGal5 alternate hap 2022)[IGV] Gallus gallus GCA_027408205.1_bGalGal5.alt SAMN28017485 PRJNA838371 2022-12-27
104 chicken (Cobb bGalGal5 primary hap 2022)[IGV] Gallus gallus GCA_027408225.1_bGalGal5.pri SAMN28017485 PRJNA838370 2022-12-28
105 chicken (GRCg6a 2018)[IGV] Gallus gallus GCF_000002315.6_GRCg6a SAMN02981218 PRJNA13342 2018-03-27
106 chicken (Huxu 2023)[IGV] Gallus gallus GCA_024206055.2_GGswu SAMN20717417 PRJNA693184 2023-02-09
107 chicken (Ross bGalGal4 alternate hap 2022)[IGV] Gallus gallus GCA_027408255.1_bGalGal4.alt SAMN28017486 PRJNA838368 2022-12-27
108 chicken (Ross bGalGal4 primary hap 2023)[IGV] Gallus gallus GCA_027557775.1_bGalGal4.pri SAMN28017486 PRJNA838369 2023-01-03
109 chicken (Silkie 2023)[IGV] Gallus gallus GCA_034509865.1_ASM3450986v1 SAMN36763864 PRJNA1000217 2023-12-21
110 chicken (Wuding W17 2024)[IGV] Gallus gallus GCA_030914275.2_ASM3091427v2 SAMN30102425 PRJNA865263 2024-03-22
111 chicken white leghorn layer X broiler (v2 broiler haplotype 2021 2021)[IGV] Gallus gallus GCF_016699485.2_bGalGal1.mat.broiler.GRCg7b SAMN15960293 PRJNA660757 2021-01-19
112 Chilean tinamou[IGV] Nothoprocta perdicaria GCF_003342845.1_notPer1 SAMN08476459 PRJNA433110 2018-07-26
113 chimney swift (M959 v1.1 2014)[IGV] Chaetura pelagica GCF_000747805.2_ChaPel_1.1 SAMN03018471 PRJNA210808 2014-09-04
114 chipping sparrow (hap1 2026)[IGV] Spizella passerina GCA_056783625.1_bSpiPas1.hap1 SAMN54950547 PRJNA1415855 2026-04-16
115 chuck-will's-widow (BGI_N321 v2 2014)[IGV] Antrostomus carolinensis GCF_000700745.2_ASM70074v2 SAMN02318612 PRJNA212888 2014-06-10
116 cinnamon-breated bunting (alternate hap 2026)[IGV] Emberiza tahapisi GCA_058130105.1_bFriTah1.1.alt SAMN36735488 PRJNA1468108 2026-06-09
117 cinnamon-breated bunting (primary hap 2026)[IGV] Emberiza tahapisi GCA_058130095.1_bFriTah1.1.rep SAMN36735488 PRJNA1468109 2026-06-09
118 Clark's Grebe (alternate hap 2026)[IGV] Aechmophorus clarkii GCA_054644135.1_bAecCla1.alt SAMN47736519 PRJNA1244926 2026-01-22
119 Clark's Grebe (primary hap 2026)[IGV] Aechmophorus clarkii GCA_054644155.1_bAecCla1.pri SAMN47736519 PRJNA1244927 2026-01-22
120 collared flycatcher[IGV] Ficedula albicollis GCF_000247815.1_FicAlb1.5 SAMN02981387 PRJNA75089 2013-06-27
121 common barn owl (M040663 2026)[IGV] Tyto alba GCA_059996075.1_ASM5999607v1 SAMN17526497 PRJNA1440222 2026-08-11
122 common buzzard (bButBut1.hap1.1 2024 refseq)[IGV] Buteo buteo GCF_964188355.1_bButBut1.hap1.1 SAMEA114594453 PRJEB76733 2024-06-21
123 common buzzard (bButBut1.hap2.1 2024)[IGV] Buteo buteo GCA_964188375.1_bButBut1.hap2.1 SAMEA114594453 PRJEB76732 2024-06-19
124 common canary (domestic yellow sc_yellow_7_cibi 2019)[IGV] Serinus canaria GCF_007115625.1_cibio_Scana_2019 SAMN12017177 PRJNA548289 2019-07-18
125 common canary (maternal hap 2026)[IGV] Serinus canaria GCA_055764355.1_bSerCaa1.mat SAMN55378693 PRJNA1425237 2026-03-10
126 common canary (serCan28SL12 2022)[IGV] Serinus canaria GCF_022539315.1_serCan2020 SAMN25990113 PRJNA807488 2022-08-25
127 common chaffinch (primary hap 2023)[IGV] Fringilla coelebs GCF_963513975.1_bFriCoe1.1 SAMEA9359753 PRJEB66368 2023-09-28
128 common cuckoo (bCucCan1 alternate hap 2021)[IGV] Cuculus canorus GCA_017976305.1_bCucCan1.alt SAMN12629508 PRJNA562016 2021-04-15
129 common cuckoo (bCucCan1 primary hap 2021 refseq)[IGV] Cuculus canorus GCF_017976375.1_bCucCan1.pri SAMN12629508 PRJNA562015 2021-04-15
130 common eider (2023)[IGV] Somateria mollissima GCA_951411735.1_bSomMol1.h1.1 SAMEA112864454 PRJEB61097 2023-06-27
131 common goldeneye (alternate hap 2024)[IGV] Bucephala clangula GCA_964059605.1_bBucCla1.1_alternate_haplotype SAMEA112468123 PRJEB76093 2024-05-29
132 common goldeneye (primary hap 2024 genbank)[IGV] Bucephala clangula GCA_964059595.1_bBucCla1.1 SAMEA112468123 PRJEB76092 2024-06-06
133 common goldeneye (primary hap 2024 refseq)[IGV] Bucephala clangula GCF_964059595.1_bBucCla1.1 SAMEA112468123 PRJEB76092 2024-06-06
134 common kestrel (hap1.1 2025)[IGV] Falco tinnunculus GCA_976974455.1_bFalTin1.hap1.1 SAMEA114594452 PRJEB98166 2025-10-26
135 common kestrel (hap2.1 2025)[IGV] Falco tinnunculus GCA_976974655.1_bFalTin1.hap2.1 SAMEA114594452 PRJEB98167 2025-10-05
136 common kingfisher (hap1.1 2026)[IGV] Alcedo atthis GCA_987195655.1_bAlcAtt1.hap1.1 SAMEA118427544 PRJEB122686 2026-09-08
137 common moorhen (bGalChl1.hap1.1 2024)[IGV] Gallinula chloropus GCA_964237585.1_bGalChl1.hap1.1 SAMEA113398958 PRJEB79218 2024-08-31
138 common moorhen (bGalChl1.hap2.1 2024)[IGV] Gallinula chloropus GCA_964237395.1_bGalChl1.hap2.1 SAMEA113398958 PRJEB79219 2024-08-29
139 common moorhen (hap1.1 2024)[IGV] Gallinula chloropus GCF_964237585.1_bGalChl1.hap1.1 SAMEA113398958 PRJEB79218 2024-08-31
140 common myna (bArcTri1 alternate hap 2023)[IGV] Acridotheres tristis GCA_027559525.1_bAcrTri1.alt SAMN28454388 PRJNA839506 2023-01-03
141 common myna (bArcTri1 primary hap 2023)[IGV] Acridotheres tristis GCA_027559615.1_bAcrTri1.pri SAMN28454388 PRJNA839507 2023-01-09
142 common pochard (bAytFer1.hap1.1 2024)[IGV] Aythya ferina GCA_964211825.1_bAytFer1.hap1.1 SAMEA112468034 PRJEB78494 2024-07-31
143 common pochard (bAytFer1.hap2.1 2024)[IGV] Aythya ferina GCA_964211795.1_bAytFer1.hap2.1 SAMEA112468034 PRJEB78493 2024-07-30
144 common pochard (hap1.1 2024)[IGV] Aythya ferina GCF_964211825.1_bAytFer1.hap1.1 SAMEA112468034 PRJEB78494 2024-07-31
145 common raven (hap1.1 2026)[IGV] Corvus corax GCA_987196915.1_bCorCor1.hap1.1 SAMEA118680308 PRJEB122712 2026-09-08
146 common redpoll (hap1.1 2026)[IGV] Acanthis flammea GCA_987194025.1_bAcaFla1.hap1.1 SAMEA120961001 PRJEB122681 2026-09-02
147 common redshank (hap1.1 2026)[IGV] Tringa totanus GCA_986271405.1_bTriTot1.hap1.1 SAMEA115433012 PRJEB115706 2026-07-06
148 common redshank (hap2.1 2026)[IGV] Tringa totanus GCA_986271475.1_bTriTot1.hap2.1 SAMEA115433012 PRJEB115705 2026-07-06
149 common redstart (hap1.1 2026)[IGV] Phoenicurus phoenicurus GCA_987197005.1_bPhoPho1.hap1.1 SAMEA120960994 PRJEB122732 2026-09-08
150 common ringed plover (hap1.1 2026)[IGV] Charadrius hiaticula GCA_988281325.1_bChaHia1.hap1.1 SAMEA115433016 PRJEB126639 2026-09-17
151 common shelduck (hap1.1 2026)[IGV] Tadorna tadorna GCA_987308825.1_bTadTad1.hap1.1 SAMEA113398967 PRJEB123333 2026-09-08
152 common snipe (hap1.1 2026)[IGV] Gallinago gallinago GCA_987197645.1_bGalGai1.hap1.1 SAMEA118427543 PRJEB122718 2026-09-08
153 common starling[IGV] Sturnus vulgaris GCF_001447265.1_Sturnus_vulgaris-1.0 SAMN04029017 PRJNA293892 2015-11-20
154 common starling (hap1 2025 genbank)[IGV] Sturnus vulgaris GCA_052056855.1_bStuVul1.hap1 SAMN49664983 PRJNA1282788 2025-08-15
155 common starling (hap1 2025 refseq)[IGV] Sturnus vulgaris GCF_052056855.1_bStuVul1.hap1 SAMN49664983 PRJNA1282788 2025-08-15
156 common starling (hap2 2025)[IGV] Sturnus vulgaris GCA_052056845.1_bStuVul1.hap2 SAMN49664983 PRJNA1282789 2025-08-15
157 common swift (bApuApu2 alternate hap 2021)[IGV] Apus apus GCA_020740585.1_bApuApu2.alt.cur SAMN22785356 PRJNA776337 2021-11-03
158 common swift (primary hap 2021 refseq)[IGV] Apus apus GCF_020740795.1_bApuApu2.pri.cur SAMN22785356 PRJNA776336 2021-11-04
159 common tern (alternate hap 2019)[IGV] Sterna hirundo GCA_009819645.1_bSteHir1.alt SAMN12369541 PRJNA558063 2019-12-23
160 common tern (primary hap 2019)[IGV] Sterna hirundo GCA_009819605.1_bSteHir1.pri SAMN12369541 PRJNA558062 2019-12-31
161 Common tern (primary hap 2026)[IGV] Sterna hirundo GCA_009819605.2_bSteHir1.pri SAMN12369541 PRJNA558062 2026-04-01
162 common whooper (hap1.1 2025)[IGV] Cygnus cygnus GCA_965278775.1_bCygCyg1.hap1.1 SAMEA113398829 PRJEB89278 2025-05-10
163 common whooper (hap2.1 2025)[IGV] Cygnus cygnus GCA_965278735.1_bCygCyg1.hap2.1 SAMEA113398829 PRJEB89277 2025-05-10
164 common wood pigeon (alternate hap 2025)[IGV] Columba palumbus GCA_965250405.1_bColPal1.1_alternate_haplotype SAMEA113398963 PRJEB88630 2025-04-20
165 common wood pigeon (primary hap 2025)[IGV] Columba palumbus GCA_965250375.1_bColPal1.1 SAMEA113398963 PRJEB88629 2025-04-20
166 common yellowthroat (alternate hap 2019)[IGV] Geothlypis trichas GCA_009764545.1_bGeoTri1.alt SAMN12631222 PRJNA589704 2019-12-18
167 common yellowthroat (primary hap 2019)[IGV] Geothlypis trichas GCA_009764595.1_bGeoTri1.pri SAMN12631222 PRJNA589703 2019-12-19
168 corn bunting (hap1.1 2026)[IGV] Emberiza calandra GCA_988240425.1_bEmbCal1.hap1.1 SAMEA118680291 PRJEB125555 2026-09-10
169 corn crake (hap1.1 2026)[IGV] Crex crex GCA_987197635.1_bCreCre1.hap1.1 SAMEA118680292 PRJEB122717 2026-09-02
170 Cory's shearwater (hap1.2 2024 genbank)[IGV] Calonectris borealis GCA_964195595.2_bCalBor7.hap1.2 SAMEA114294356 PRJEB77030 2024-07-24
171 Cory's shearwater (hap1.2 2024 refseq)[IGV] Calonectris borealis GCF_964195595.1_bCalBor7.hap1.2 SAMEA114294356 PRJEB77030 2024-07-24
172 Cory's shearwater (hap2.2 2024)[IGV] Calonectris borealis GCA_964196065.2_bCalBor7.hap2.2 SAMEA114294356 PRJEB77029 2024-07-23
173 crested eagle (hap1 2024)[IGV] Morphnus guianensis GCA_045345505.1_bMorGui1_haplotype_1 SAMN44513986 PRJNA1180118 2024-12-02
174 crested eagle (hap2 2024)[IGV] Morphnus guianensis GCA_045345515.1_bMorGui1_haplotype_2 SAMN44513986 PRJNA1180117 2024-12-02
175 crested ibis (BGI_Y956 2014)[IGV] Nipponia nippon GCF_000708225.1_ASM70822v1 SAMN02596464 PRJNA232572 2014-06-16
176 crested ibis (South Korea SJK-2023a 2025)[IGV] Nipponia nippon GCF_047370975.1_ASM4737097v1 SAMN38701424 PRJNA1049517 2025-02-03
177 cuckoo roller (BGI_N330 2014)[IGV] Leptosomus discolor GCF_000691785.1_ASM69178v1 SAMN02333687 PRJNA212897 2014-05-23
178 cuckoo roller (bLepDis1hap2 2023)[IGV] Leptosomus discolor GCF_034619465.1_bLepDis1.hap2 SAMN37284216 PRJNA1013355 2023-12-27
179 cuckoo roller (hap1 2023)[IGV] Leptosomus discolor GCA_034619455.1_bLepDis1.hap1 SAMN37284216 PRJNA1013356 2023-12-27
180 cuckoo roller (hap2 2023)[IGV] Leptosomus discolor GCA_034619465.1_bLepDis1.hap2 SAMN37284216 PRJNA1013355 2023-12-27
181 Dalmatian pelican (alternate hap 2023)[IGV] Pelecanus crispus GCA_030449815.1_bPelCri1.alt SAMN35784560 PRJNA984932 2023-07-13
182 Dalmatian pelican (BGI_N334 2014)[IGV] Pelecanus crispus GCF_000687375.1_ASM68737v1 SAMN02339887 PRJNA212901 2014-05-09
183 Dalmatian pelican (primary hap 2023 genbank)[IGV] Pelecanus crispus GCA_030463565.1_bPelCri1.pri SAMN35784560 PRJNA984931 2023-07-18
184 Dalmatian pelican (primary hap 2023 refseq)[IGV] Pelecanus crispus GCF_030463565.1_bPelCri1.pri SAMN35784560 PRJNA984931 2023-07-18
185 Domestic goose (bAnsAns1.hap1.1 2024)[IGV] Anser anser GCA_964211835.1_bAnsAns1.hap1.1 SAMEA113398854 PRJEB78491 2024-07-31
186 Domestic goose (bAnsAns1.hap2.1 2024)[IGV] Anser anser GCA_964211785.1_bAnsAns1.hap2.1 SAMEA113398854 PRJEB78492 2024-07-31
187 domestic goose (hap1.1 2024)[IGV] Anser anser GCF_964211835.1_bAnsAns1.hap1.1 SAMEA113398854 PRJEB78491 2024-07-31
188 Downy woodpecker (alternate hap 2020)[IGV] Dryobates pubescens GCA_014839825.1_bDryPub1.alt SAMN12629497 PRJNA561992 2020-09-30
189 downy woodpecker (primary hap 2020)[IGV] Dryobates pubescens GCF_014839835.1_bDryPub1.pri SAMN12629497 PRJNA561991 2020-10-02
190 dunlin (hap1.1 2026)[IGV] Calidris alpina GCA_987196145.1_bCalAlp1.hap1.1 SAMEA118680293 PRJEB122699 2026-09-08
191 dunnock (hap1.1 2026)[IGV] Prunella modularis GCA_988280745.1_bPruMod1.hap1.1 SAMEA117632801 PRJEB126644 2026-09-17
192 dusky-headed brushfinch (hap1 2026)[IGV] Atlapetes fuscoolivaceus GCA_060712285.1_bAtlFus2.hap1 SAMN62114561 PRJNA1506096 2026-09-01
193 East African grey crowned-crane[IGV] Balearica regulorum gibbericeps GCF_000709895.1_ASM70989v1 SAMN02318095 PRJNA212879 2014-06-25
194 East African grey crowned-crane (alternate hap 2020)[IGV] Balearica regulorum gibbericeps GCA_011004865.1_bBalReg1.alt SAMN12615749 PRJNA561891 2020-02-24
195 East African grey crowned-crane (primary hap 2020 genbank)[IGV] Balearica regulorum gibbericeps GCA_011004875.1_bBalReg1.pri SAMN12615749 PRJNA561890 2020-03-05
196 East African grey crowned-crane (primary hap 2020 refseq)[IGV] Balearica regulorum gibbericeps GCF_011004875.1_bBalReg1.pri SAMN12615749 PRJNA561890 2020-03-05
197 Eastern black-eared wheatear (GR-GAL-2019-014 2023 genbank)[IGV] Oenanthe melanoleuca GCA_029582105.1_OMel1.0 SAMN33408179 PRJNA937434 2023-04-06
198 Eastern black-eared wheatear (GR-GAL-2019-014 2023 refseq)[IGV] Oenanthe melanoleuca GCF_029582105.1_OMel1.0 SAMN33408179 PRJNA937434 2023-04-06
199 Eastern phoebe (bSayPho3hap1 2026)[IGV] Sayornis phoebe GCA_055470965.1_bSayPho3.hap1 SAMN55284607 PRJNA1421038 2026-02-24
200 Egyptian goose (hap1.1 2025)[IGV] Alopochen aegyptiaca GCA_965278175.1_bAloAeg2.hap1.1 SAMEA113398845 PRJEB89196 2025-05-08
201 Egyptian goose (hap2.1 2025)[IGV] Alopochen aegyptiaca GCA_965278125.1_bAloAeg2.hap2.1 SAMEA113398845 PRJEB89195 2025-05-08
202 elegant crested-tinamou (YG026_01 alternate hap 2025)[IGV] Eudromia elegans GCA_047922975.1_bEudEle1_v1.hap2 SAMN46865137 PRJNA1224798 2025-02-20
203 elegant crested-tinamou (YG026_01 primary hap 2025)[IGV] Eudromia elegans GCA_047922985.1_bEudEle1_v1.hap1 SAMN46865137 PRJNA1224799 2025-02-20
204 emperor penguin[IGV] Aptenodytes forsteri GCF_000699145.1_ASM69914v1 SAMN02596600 PRJNA235982 2014-06-06
205 emu (2018)[IGV] Dromaius novaehollandiae GCF_003342905.1_droNov1 SAMN08476457 PRJNA433110 2018-07-26
206 emu (hap1 2024 genbank)[IGV] Dromaius novaehollandiae GCA_036370855.1_bDroNov1.hap1 SAMN39262816 PRJNA1061216 2024-02-26
207 emu (hap1 2024 refseq)[IGV] Dromaius novaehollandiae GCF_036370855.1_bDroNov1.hap1 SAMN39262816 PRJNA1061216 2024-02-26
208 emu (hap2 2024)[IGV] Dromaius novaehollandiae GCA_036417515.1_bDroNov1.hap2 SAMN39262816 PRJNA1061217 2024-02-26
209 emu (v2 ZJU1.0 2023)[IGV] Dromaius novaehollandiae GCA_016128335.2_ZJU2.0 SAMN15183959 PRJNA638233 2023-01-13
210 Eurasian bullfinch (hap1.1 2026)[IGV] Pyrrhula pyrrhula GCA_987196105.1_bPyrPyh2.hap1.1 SAMEA118680296 PRJEB122742 2026-09-08
211 Eurasian chiffchaff (hap1.1 2026)[IGV] Phylloscopus collybita GCA_988136415.1_bPhyCol1.hap1.1 SAMEA118680305 PRJEB124031 2026-09-09
212 Eurasian collared-dove (hap1.1 2024 genbank)[IGV] Streptopelia decaocto GCA_964273445.1_bStrDea1.hap1.1 SAMEA113398962 PRJEB80767 2024-10-04
213 Eurasian collared-dove (hap1.1 2024 refseq)[IGV] Streptopelia decaocto GCF_964273445.1_bStrDea1.hap1.1 SAMEA113398962 PRJEB80767 2024-10-04
214 Eurasian collared-dove (hap2.1 2024)[IGV] Streptopelia decaocto GCA_964273585.1_bStrDea1.hap2.1 SAMEA113398962 PRJEB80768 2024-10-04
215 Eurasian crane (hap1 2024)[IGV] Grus grus GCA_964106855.1_bGruGru1.hap1.1 SAMEA113398837 PRJEB75999 2024-06-06
216 Eurasian crane (hap1.1 2024)[IGV] Grus grus GCF_964106855.1_bGruGru1.hap1.1 SAMEA113398837 PRJEB75999 2024-06-06
217 Eurasian crane (hap2.1 2024)[IGV] Grus grus GCA_964059345.1_bGruGru1.hap2.1 SAMEA113398837 PRJEB76000 2024-05-29
218 Eurasian curlew (bNumArq3.hap1.1 2024)[IGV] Numenius arquata GCF_964106895.1_bNumArq3.hap1.1 SAMEA112693994 PRJEB75987 2024-06-06
219 Eurasian curlew (hap1 2024)[IGV] Numenius arquata GCA_964106895.1_bNumArq3.hap1.1 SAMEA112693994 PRJEB75987 2024-06-06
220 Eurasian curlew (hap2 2024)[IGV] Numenius arquata GCA_964059295.1_bNumArq3.hap2.1 SAMEA112693994 PRJEB75988 2024-05-29
221 Eurasian goldfinch (hap1.1 2026)[IGV] Carduelis carduelis GCA_987197145.1_bCarCar1.hap1.1 SAMEA117632800 PRJEB122701 2026-09-08
222 Eurasian goshawk (v2 primary hap 2022 genbank)[IGV] Astur gentilis GCA_929443795.2_bAccGen1.2 SAMEA8235650 PRJEB50702 2022-10-27
223 Eurasian goshawk (v2 primary hap 2022 refseq)[IGV] Astur gentilis GCF_929443795.2_bAccGen1.2 SAMEA8235650 PRJEB50702 2022-10-25
224 Eurasian jay (hap1.1 2026)[IGV] Garrulus glandarius GCA_987195975.1_bGarGla1.hap1.1 SAMEA118680280 PRJEB122720 2026-09-08
225 Eurasian linnet (hap1.1 2026)[IGV] Linaria cannabina GCA_987195915.1_bLinCan2.hap1.1 SAMEA118680283 PRJEB122725 2026-09-08
226 Eurasian magpie (hap1.1 2026)[IGV] Pica pica GCA_987212955.1_bPicPic2.hap1.1 SAMEA118680304 PRJEB123113 2026-09-08
227 Eurasian nightjar (alternate hap 2021)[IGV] Caprimulgus europaeus GCA_907165095.1_bCapEur3.1_alternate_haplotype SAMEA7524394 PRJEB44541 2021-05-15
228 Eurasian nightjar (primary hap 2021 genbank)[IGV] Caprimulgus europaeus GCA_907165065.1_bCapEur3.1 SAMEA7524394 PRJEB44540 2021-05-17
229 Eurasian nightjar (primary hap 2021 refseq)[IGV] Caprimulgus europaeus GCF_907165065.1_bCapEur3.1 SAMEA7524394 PRJEB44540 2021-05-17
230 Eurasian oystercatcher (hap1.1 2025)[IGV] Haematopus ostralegus GCA_976988815.1_bHaeOst1.hap1.1 SAMEA115432997 PRJEB98794 2025-11-08
231 Eurasian oystercatcher (hap2.1 2025)[IGV] Haematopus ostralegus GCA_976988755.1_bHaeOst1.hap2.1 SAMEA115432997 PRJEB98795 2025-10-10
232 Eurasian siskin (hap1.1 2026)[IGV] Spinus spinus GCA_987197695.1_bSpiSpi3.hap1.1 SAMEA118680294 PRJEB122749 2026-09-02
233 Eurasian skylark (hap1.1 2026)[IGV] Alauda arvensis GCA_987194035.1_bAlaArv1.hap1.1 SAMEA118680297 PRJEB122685 2026-09-02
234 Eurasian sparrowhawk (hap1.1 2026)[IGV] Accipiter nisus GCA_978019825.1_bAccNis1.hap1.1 SAMEA114594454 PRJEB106395 2026-02-01
235 Eurasian sparrowhawk (hap2.1 2026)[IGV] Accipiter nisus GCA_978019815.1_bAccNis1.hap2.1 SAMEA114594454 PRJEB106394 2026-01-14
236 Eurasian spoonbill (hap1.1 2025 genbank)[IGV] Platalea leucorodia GCA_965183815.1_bPlaLeu2.hap1.1 SAMEA112468120 PRJEB86379 2025-03-04
237 Eurasian spoonbill (hap1.1 2025 refseq)[IGV] Platalea leucorodia GCF_965183815.1_bPlaLeu2.hap1.1 SAMEA112468120 PRJEB86379 2025-03-02
238 Eurasian spoonbill (hap2.1 2025)[IGV] Platalea leucorodia GCA_965183785.1_bPlaLeu2.hap2.1 SAMEA112468120 PRJEB86378 2025-03-05
239 Eurasian tree sparrow[IGV] Passer montanus GCF_014805655.1_ASM1480565v1 SAMN07998528 PRJNA417520 2020-09-30
240 Eurasian tree-creeper (hap1.1 2026)[IGV] Certhia familiaris GCA_988280705.1_bCerFam1.hap1.1 SAMEA117632796 PRJEB126635 2026-09-17
241 Eurasian wren (hap1.1 2026)[IGV] Troglodytes troglodytes GCA_987195935.1_bTroTro1.hap1.1 SAMEA117632810 PRJEB122758 2026-09-08
242 European golden plover (primary hap 2021)[IGV] Pluvialis apricaria GCA_017639485.1_bPluApr1.pri SAMN18353970 PRJNA715924 2021-03-30
243 European greenfinch (hap1.1 2026)[IGV] Chloris chloris GCA_987196555.1_bChlChl3.hap1.1 SAMEA118680302 PRJEB122703 2026-09-03
244 European robin (alternate hap 2021)[IGV] Erithacus rubecula GCA_903797565.2_bEriRub2.2_alternate_haplotype SAMEA4760689 PRJEB38657 2021-03-21
245 European robin (primary hap 2021 genbank)[IGV] Erithacus rubecula GCA_903797595.2_bEriRub2.2 SAMEA4760689 PRJEB38658 2021-05-03
246 European robin (primary hap 2021 refseq)[IGV] Erithacus rubecula GCF_903797595.1_bEriRub2.2 SAMEA4760689 PRJEB38658 2021-05-03
247 European shag (alternate hap 2023)[IGV] Phalacrocorax aristotelis GCA_949628205.1_bGulAri2.1_alternate_haplotype SAMEA10059652 PRJEB60538 2023-04-09
248 European shag (primary hap 2023 genbank)[IGV] Phalacrocorax aristotelis GCA_949628215.1_bGulAri2.1 SAMEA10059652 PRJEB60539 2023-04-08
249 European shag (primary hap 2023 refseq)[IGV] Phalacrocorax aristotelis GCF_949628215.1_bGulAri2.1 SAMEA10059652 PRJEB60539 2023-04-08
250 European turtle dove (v1.2 2021)[IGV] Streptopelia turtur GCA_901699155.2_bStrTur1.2 SAMEA994735 PRJEB32724 2021-05-17
251 European turtle dove (v1.2 alternate hap 2021)[IGV] Streptopelia turtur GCA_901699165.2_bStrTur1.2_alternate_haplotype SAMEA994735 PRJEB32725 2021-04-15
252 Eurpoean golden plover (bPluApr1 alternate hap 2021)[IGV] Pluvialis apricaria GCA_017639475.1_bPluApr1.alt SAMN18353970 PRJNA715923 2021-03-30
253 firecrest (hap1.1 2026)[IGV] Regulus ignicapilla GCA_987196245.1_bRegIgn1.hap1.1 SAMEA118680300 PRJEB122745 2026-09-08
254 gadwall (hap1.1 2025)[IGV] Mareca strepera GCA_965278785.1_bMarStr1.hap1.1 SAMEA112468030 PRJEB89279 2025-05-10
255 gadwall (hap2.1 2025)[IGV] Mareca strepera GCA_965278795.1_bMarStr1.hap2.1 SAMEA112468030 PRJEB89280 2025-05-10
256 garden warbler (bSylBor1 alternate hap 2020)[IGV] Sylvia borin GCA_014839765.1_bSylBor1.alt SAMN12618613 PRJNA561946 2020-09-30
257 garden warbler (primary hap 2020)[IGV] Sylvia borin GCA_014839755.1_bSylBor1.pri SAMN12618613 PRJNA561945 2020-10-02
258 glaucous gull (hap1.1 2025)[IGV] Larus hyperboreus GCA_965654215.1_bLarHyp1.hap1.1 SAMEA115119300 PRJEB94823 2025-08-03
259 glaucous gull (hap2.1 2025)[IGV] Larus hyperboreus GCA_965654415.1_bLarHyp1.hap2.1 SAMEA115119300 PRJEB94822 2025-08-03
260 glaucous-winged gull (hap1.1 2025)[IGV] Larus glaucescens GCA_965654385.1_bLarGla1.hap1.1 SAMEA115348653 PRJEB94821 2025-08-03
261 glaucous-winged gull (hap2.1 2025)[IGV] Larus glaucescens GCA_965654465.1_bLarGla1.hap2.1 SAMEA115348653 PRJEB94820 2025-08-03
262 goldcrest (hap1.1 2026)[IGV] Regulus regulus GCA_988280725.1_bRegReg1.hap1.1 SAMEA117632805 PRJEB126648 2026-09-17
263 golden eagle (primary hap 2021)[IGV] Aquila chrysaetos chrysaetos GCA_900496995.4_bAquChr1.4 SAMEA994725 PRJEB27699 2021-03-26
264 golden eagle (v1.4 2021)[IGV] Aquila chrysaetos chrysaetos GCF_900496995.4_bAquChr1.4 SAMEA994725 PRJEB27699 2021-03-26
265 golden eagle (v1.4 alternate hap 2021)[IGV] Aquila chrysaetos chrysaetos GCA_902153765.2_bAquChr1.4_alternate_haplotype SAMEA994725 PRJEB33298 2021-03-26
266 golden parakeet (hap1 2024)[IGV] Guaruba guarouba GCA_045345405.1_bGuaGua1_haplotype_1 SAMN44514542 PRJNA1180119 2024-12-02
267 golden parakeet (hap2 2024)[IGV] Guaruba guarouba GCA_045519325.1_bGuaGua1_haplotype_2 SAMN44514542 PRJNA1180120 2024-12-02
268 golden pheasant[IGV] Chrysolophus pictus GCA_003413605.1_Chrysolophus_pictus_GenomeV1.0 SAMN02980944 PRJNA257945 2018-08-20
269 golden-collared manakin[IGV] Manacus vitellinus GCF_001715985.3_ASM171598v3 SAMN02299332 PRJNA335611 2019-07-03
270 golden-fronted redstart (hap1 2026)[IGV] Myioborus ornatus GCA_057814835.1_bMyiOra2.hap1 SAMN57316997 PRJNA1454680 2026-06-01
271 golden-fronted redstart (hap2 2026)[IGV] Myioborus ornatus GCA_057814795.1_bMyiOra2.hap2 SAMN57316997 PRJNA1454679 2026-06-01
272 great black-backed gull (hap1.1 2025)[IGV] Larus marinus GCA_965649785.1_bLarMar3.hap1.1 SAMEA115168457 PRJEB94508 2025-07-31
273 great black-backed gull (hap2.1 2025)[IGV] Larus marinus GCA_965649815.1_bLarMar3.hap2.1 SAMEA115168457 PRJEB94507 2025-07-31
274 great bustard (hap1.1 2026)[IGV] Otis tarda GCA_987201465.1_bOtiTar7.hap1.1 SAMEA114806514 PRJEB122957 2026-09-08
275 great cormorant (alternate hap 2024)[IGV] Phalacrocorax carbo GCA_963921815.1_bPhaCar2.1_alternate_haplotype SAMEA8228692 PRJEB71802 2024-01-12
276 great cormorant (BGI_N336 2014)[IGV] Phalacrocorax carbo GCF_000708925.1_ASM70892v1 SAMN02339889 PRJNA212903 2014-06-17
277 great cormorant (primary hap 2024 genbank)[IGV] Phalacrocorax carbo GCA_963921805.1_bPhaCar2.1 SAMEA8228692 PRJEB71801 2024-02-09
278 great cormorant (primary hap 2024 refseq)[IGV] Phalacrocorax carbo GCF_963921805.1_bPhaCar2.1 SAMEA8228692 PRJEB71801 2024-02-09
279 great egret (B10K-D-DBG-74 2024)[IGV] Ardea alba GCA_045788385.1_ASM4578838v1 SAMN44603793 PRJNA1153307 2024-12-06
280 great potoo (bNycGra1 alternate hap 2020)[IGV] Nyctibius grandis GCA_013368595.1_bNycGra1.alt SAMN12622411 PRJNA562021 2020-06-23
281 great potoo (primary hap 2020 genbank)[IGV] Nyctibius grandis GCA_013368605.1_bNycGra1.pri SAMN12622411 PRJNA562020 2020-06-23
282 great potoo (primary hap 2020 refseq)[IGV] Nyctibius grandis GCF_013368605.1_bNycGra1.pri SAMN12622411 PRJNA562020 2020-06-23
283 great rufous woodcreeper (hap1.1 2026)[IGV] Dendrocopos major GCA_987197325.1_bXipMaj1.hap1.1 SAMEA117632803 PRJEB122760 2026-09-08
284 great tit[IGV] Parus major GCF_001522545.3_Parus_major1.1 SAMN03083587 PRJNA208335 2019-01-15
285 greater honeyguide (239-I01 2023)[IGV] Indicator indicator GCF_027791375.1_UM_Iind_1.1 SAMN31686289 PRJNA900296 2023-01-13
286 greater prairie chicken[IGV] Tympanuchus cupido pinnatus GCA_001870855.1_T_cupido_pinnatus_GPC_3440_v1 SAMN05433571 PRJNA330991 2016-11-07
287 greater rhea[IGV] Rhea americana GCA_003343005.1_rheAme1 SAMN08476460 PRJNA433110 2018-07-26
288 greater rhea (MKP2758 2018)[IGV] Rhea americana GCF_003343005.1_rheAme1 SAMN08476460 PRJNA433110 2018-07-26
289 greater sage-grouse[IGV] Centrocercus urophasianus GCF_019232065.1_USGS_Curo_1.0 SAMN20124253 PRJNA734947 2021-07-15
290 greater scaup (hap1 2025)[IGV] Aythya marila GCA_965140915.1_bAytMar2.hap1.1 SAMEA115433010 PRJEB85746 2025-02-13
291 greater scaup (hap1.1 2025)[IGV] Aythya marila GCF_965140915.1_bAytMar2.hap1.1 SAMEA115433010 PRJEB85746 2025-02-13
292 greater scaup (hap2 2025)[IGV] Aythya marila GCA_965140925.1_bAytMar2.hap2.1 SAMEA115433010 PRJEB85745 2025-02-13
293 greater whitethroat (hap1.1 2026)[IGV] Curruca communis GCA_987195945.1_bSylCom1.hap1.1 SAMEA118680312 PRJEB122754 2026-09-03
294 green peafowl[IGV] Pavo muticus GCA_016647715.1_ASM1664771v1 SAMN15486085 PRJNA644939 2021-01-15
295 grey catbird (hap1 2026)[IGV] Dumetella carolinensis GCA_057427935.1_bDumCar1.hap1 SAMN55209944 PRJNA1420188 2026-05-11
296 grey catbird (hap2 2026)[IGV] Dumetella carolinensis GCA_057427925.1_bDumCar1.hap2 SAMN55209944 PRJNA1420189 2026-05-11
297 grey heron (hap1.1 2026)[IGV] Ardea cinerea GCA_987197345.1_bArdCin1.hap1.1 SAMEA118427534 PRJEB122697 2026-09-03
298 grey parrot (MU2MI4XJKV 2020)[IGV] Psittacus erithacus GCA_009867235.1_ASM986723v1 SAMN12165726 PRJNA551771 2020-01-14
299 grey partridge (hap1.1 2026)[IGV] Perdix perdix GCA_987270415.1_bPerPer1.hap1.1 SAMEA118680287 PRJEB123330 2026-09-08
300 grey wagtail (hap1.1 2026)[IGV] Motacilla cinerea GCA_987196015.1_bMotCin1.hap1.1 SAMEA120960991 PRJEB122728 2026-09-03
301 ground parrot (Strahan ANWC-B61680 2023)[IGV] Pezoporus wallicus GCF_028554395.1_APGP_CSIRO_Pwel_v1 SAMN32236640 PRJNA912258 2023-02-08
302 gyrfalcon (bFalRus1 alternate hap 2020)[IGV] Falco rusticolus GCA_015220155.1_bFalRus1.alt SAMN12629496 PRJNA561989 2020-11-02
303 gyrfalcon (primary hap 2020 genbank)[IGV] Falco rusticolus GCA_015220075.1_bFalRus1.pri SAMN12629496 PRJNA561988 2020-11-03
304 gyrfalcon (primary hap 2020 refseq)[IGV] Falco rusticolus GCF_015220075.1_bFalRus1.pri SAMN12629496 PRJNA561988 2020-11-03
305 Harpy eagle (bHarHar1 alternate hap 2022)[IGV] Harpia harpyja GCA_026419925.1_bHarHar1 SAMN31530492 PRJNA896140 2022-11-25
306 Harpy eagle (primary hap 2022 refseq)[IGV] Harpia harpyja GCF_026419915.1_bHarHar1_primary_haplotype SAMN31530492 PRJNA896141 2022-11-27
307 Harris's hawk (TCWC 14879 2022)[IGV] Parabuteo unicinctus GCA_025311615.1_ASM2531161v1 SAMN25284385 PRJNA800799 2022-09-20
308 Hawaiian crow (bCorHaw1 alternate hap 2021)[IGV] Corvus hawaiiensis GCA_020740675.1_bCorHaw1.alt.cur SAMN22550278 PRJNA774316 2021-11-03
309 Hawaiian crow (primary hap 2021 refseq)[IGV] Corvus hawaiiensis GCF_020740725.1_bCorHaw1.pri.cur SAMN22550278 PRJNA774314 2021-11-04
310 hawfinch (2025)[IGV] Coccothraustes coccothraustes GCA_965649865.1_bCocCoc1.h1 SAMEA118362694 PRJEB89877 2025-07-31
311 helmeted guineafowl[IGV] Numida meleagris GCF_002078875.1_NumMel1.0 SAMN05969731 PRJNA352321 2017-06-01
312 helmeted honeyeater (B80296 2025)[IGV] Lichenostomus cassidix GCF_008360975.1_HeHo_3.0 SAMN12287370 PRJNA554936 2025-07-30
313 hen harrier (hap1.1 2026)[IGV] Circus cyaneus GCA_987196875.1_bCirCya1.hap1.1 SAMEA117649658 PRJEB122706 2026-09-03
314 herring gull (hap1 2024 genbank)[IGV] Larus argentatus GCA_964417175.1_bLarArg3.hap1.1 SAMEA115168456 PRJEB83061 2024-12-05
315 herring gull (hap1 2024 refseq)[IGV] Larus argentatus GCF_964417175.1_bLarArg3.hap1.1 SAMEA115168456 PRJEB83061 2024-12-05
316 herring gull (hap2 2024)[IGV] Larus argentatus GCA_964417125.1_bLarArg3.hap2.1 SAMEA115168456 PRJEB83060 2024-12-05
317 hoatzin (BGI_N306 2014)[IGV] Opisthocomus hoazin GCF_000692075.1_ASM69207v1 SAMN02302474 PRJNA212873 2014-05-19
318 hoatzin (hap1 2023 genbank)[IGV] Opisthocomus hoazin GCA_030867145.1_bOpiHoa1.hap1 SAMN37055462 PRJNA1007258 2023-08-24
319 hoatzin (hap1 2023 refseq)[IGV] Opisthocomus hoazin GCF_030867145.1_bOpiHoa1.hap1 SAMN37055462 PRJNA1007258 2023-08-24
320 hoatzin (hap2 2023)[IGV] Opisthocomus hoazin GCA_030867165.1_bOpiHoa1.hap2 SAMN37055462 PRJNA1007257 2023-08-24
321 hooded crow (v6 S_Up_H32 2022)[IGV] Corvus cornix cornix GCF_000738735.6_ASM73873v6 SAMN02143031 PRJNA192205 2022-04-01
322 house finch (bHaeMex1 alternate hap 2022)[IGV] Haemorhous mexicanus GCA_027406555.1_bHaeMex1.alt SAMN28453576 PRJNA839498 2022-12-27
323 house finch (primary hap 2022 refseq)[IGV] Haemorhous mexicanus GCF_027477595.1_bHaeMex1.pri SAMN28453576 PRJNA839499 2022-12-29
324 house sparrow (hap1 2024 genbank)[IGV] Passer domesticus GCA_036417665.1_bPasDom1.hap1 SAMN39255856 PRJNA1064421 2024-02-07
325 house sparrow (hap1 2024 refseq)[IGV] Passer domesticus GCF_036417665.1_bPasDom1.hap1 SAMN39255856 PRJNA1064421 2024-02-07
326 house sparrow (hap2 2024)[IGV] Passer domesticus GCA_036417895.1_bPasDom1.hap2 SAMN39255856 PRJNA1064420 2024-02-07
327 House wren (hap1 2026)[IGV] Troglodytes aedon GCA_057917895.1_bTroAed1.hap1 SAMN55344070 PRJNA1423330 2026-06-01
328 House wren (hap1_v2 2026)[IGV] Troglodytes aedon GCA_057917895.2_bTroAed1.hap1_v2 SAMN55344070 PRJNA1423330 2026-09-24
329 House wren (hap2 2026)[IGV] Troglodytes aedon GCA_057816365.1_bTroAed1.hap2 SAMN55344070 PRJNA1423331 2026-06-01
330 Humboldt's penguin (bSphHub1 alternate hap 2022)[IGV] Spheniscus humboldti GCA_027474345.1_bSphHub1.alt SAMN28408465 PRJNA838344 2022-12-27
331 Humboldt's penguin (bSphHub1 primary hap 2022)[IGV] Spheniscus humboldti GCA_027474245.1_bSphHub1.pri SAMN28408465 PRJNA838343 2022-12-28
332 hyacinth macaw (LEKZKR9XQ3 2022)[IGV] Anodorhynchus hyacinthinus GCA_009936445.2_ASM993644v2 SAMN09689126 PRJNA481562 2022-07-21
333 jackass penguin (hap1 2025)[IGV] Spheniscus demersus GCA_050947425.1_bSphDem1.hap1 SAMN47760132 PRJNA1245601 2025-06-17
334 jackass penguin (hap2 2025)[IGV] Spheniscus demersus GCA_050947505.1_bSphDem1.hap2 SAMN47760132 PRJNA1245602 2025-06-17
335 jackdaw (hap1.1 2025)[IGV] Coloeus monedula GCA_965178545.1_bColMon1.hap1.1 SAMEA115433023 PRJEB86324 2025-03-04
336 jackdaw (hap2.1 2025)[IGV] Coloeus monedula GCA_965178535.1_bColMon1.hap2.1 SAMEA115433023 PRJEB86323 2025-03-04
337 jackdaw (S_Up_J01 2020)[IGV] Coloeus monedula GCA_013407035.1_ASM1340703v1 SAMN14646012 PRJNA626609 2020-07-13
338 Japanese quail (2016)[IGV] Coturnix japonica GCF_001577835.2_Coturnix_japonica_2.1 SAMN03989050 PRJNA292031 2016-03-01
339 Japanese quail (JQ_muscle 2026)[IGV] Coturnix japonica GCA_061083535.1_ASM6108353v1 SAMN55867808 PRJNA1414791 2026-09-08
340 Japanese quail (WE 2025)[IGV] Coturnix japonica GCF_054131305.1_WE-NBRP24 SAMN50632847 PRJNA1306358 2025-12-23
341 kagu (bRhyJub1 alternate hap 2023)[IGV] Rhynochetos jubatus GCA_027595965.1_bRhyJub1.alt SAMN31802033 PRJNA916496 2023-01-06
342 kagu (bRhyJub1 primary hap 2023)[IGV] Rhynochetos jubatus GCA_027574665.1_bRhyJub1.pri SAMN31802033 PRJNA916495 2023-01-09
343 kakapo (Jane alternate hap 2019)[IGV] Strigops habroptila GCA_004011185.1_bStrHab1_v1.h SAMN09948751 PRJNA489134 2019-01-10
344 kakapo (v2 Jane 2020 refseq)[IGV] Strigops habroptila GCF_004027225.2_bStrHab1.2.pri SAMN09948751 PRJNA489135 2020-03-04
345 kea[IGV] Nestor notabilis GCF_000696875.1_ASM69687v1 SAMN02339299 PRJNA212900 2014-06-05
346 killdeer[IGV] Charadrius vociferus GCF_000708025.1_ASM70802v2 SAMN02296710 PRJNA212867 2014-08-05
347 king penguin (2025)[IGV] Aptenodytes patagonicus GCF_965638725.1_bAptPat1.pri.cur SAMEA117789397 PRJEB86486 2025-07-09
348 king quail (bCotChi1hap2 2024)[IGV] Excalfactoria chinensis GCF_039878825.1_bCotChi1.hap2 SAMN41253798 PRJNA1108770 2024-05-31
349 king vulture (hap1 2024)[IGV] Sarcoramphus papa GCA_037962945.1_bSarPap1.hap1 SAMN40647026 PRJNA1093106 2024-04-04
350 king vulture (hap2 2024)[IGV] Sarcoramphus papa GCA_037950955.1_bSarPap1.hap2 SAMN40647026 PRJNA1093107 2024-04-04
351 lammergeier (bGypBar2 alternate hap 2023)[IGV] Gypaetus barbatus GCA_028017155.1_bGypBar2.alt SAMN32256411 PRJNA912842 2023-01-26
352 lammergeier (bGypBar2 primary hap 2023)[IGV] Gypaetus barbatus GCA_028022735.1_bGypBar2.pri SAMN32256411 PRJNA912841 2023-01-31
353 lance-tailed manakin (2020)[IGV] Chiroxiphia lanceolata GCF_009829145.1_bChiLan1.pri SAMN12620979 PRJNA561943 2020-01-03
354 lance-tailed manakin (alternate hap 2020)[IGV] Chiroxiphia lanceolata GCA_009829205.1_bChiLan1.alt SAMN12620979 PRJNA561944 2020-01-03
355 lance-tailed manakin (primary hap 2020)[IGV] Chiroxiphia lanceolata GCA_009829145.1_bChiLan1.pri SAMN12620979 PRJNA561943 2020-01-03
356 lanner falcon (bFalBia1 alternate hap 2022)[IGV] Falco biarmicus GCA_023634305.1_bFalBia1.alt SAMN28688289 PRJNA842827 2022-06-01
357 lanner falcon (bFalBia1 primary hap 2022 refseq)[IGV] Falco biarmicus GCF_023638135.1_bFalBia1.pri SAMN28688289 PRJNA842826 2022-06-02
358 lava heron (hap1 2026)[IGV] Butorides sundevalli GCA_057816235.1_bButSun1.hap1 SAMN59337214 PRJNA1463294 2026-06-01
359 lava heron (hap2 2026)[IGV] Butorides sundevalli GCA_057816225.1_bButSun1.hap2 SAMN59337214 PRJNA1463293 2026-06-01
360 lesser black-backed gull (hap1.2 2025)[IGV] Larus fuscus GCA_963932225.2_bLarFus1.hap1.2 SAMEA112468039 PRJEB72328 2025-08-23
361 lesser black-backed gull (hap2.2 2025)[IGV] Larus fuscus GCA_963932325.2_bLarFus1.hap2.2 SAMEA112468039 PRJEB72327 2025-08-23
362 lesser black-backed gull (primary hap 2024)[IGV] Larus fuscus GCA_963932225.1_bLarFus1.1 SAMEA112468039 PRJEB72328 2024-02-07
363 lesser kestrel (alternate hap 2021)[IGV] Falco naumanni GCA_017639645.1_bFalNau1.mat SAMN16870685 PRJNA702665 2021-03-30
364 lesser kestrel (primary hap 2021)[IGV] Falco naumanni GCA_017639655.1_bFalNau1.pat SAMN16870685 PRJNA702666 2021-03-30
365 lesser kestrel (v2 2021)[IGV] Falco naumanni GCF_017639655.2_bFalNau1.pat SAMN16870685 PRJNA702666 2021-03-30
366 lesser prairie-chicken (F22 2022)[IGV] Tympanuchus pallidicinctus GCF_026119805.1_pur_lepc_1.0 SAMN31408225 PRJNA893009 2022-11-10
367 lesser redpoll (hap1.1 2026)[IGV] Acanthis cabaret GCA_988280675.1_bAcaCab1.hap1.1 SAMEA117632798 PRJEB126633 2026-09-17
368 lesser rhea (206185 2018)[IGV] Rhea pennata GCA_003342835.1_rhePen1 SAMN08476461 PRJNA433110 2018-07-26
369 lesser rhea (bPtePen1 alternate hap 2023)[IGV] Rhea pennata GCA_028389885.1_bPtePen1.alt SAMN32606345 PRJNA918802 2023-02-01
370 lesser rhea (bPtePen1 primary hap 2023 refseq)[IGV] Rhea pennata GCF_028389875.1_bPtePen1.pri SAMN32606345 PRJNA918801 2023-02-06
371 lesser white-fronted goose (hap1.1 2025)[IGV] Anser erythropus GCA_965277985.1_bAnsEry1.hap1.1 SAMEA113398961 PRJEB89150 2025-05-04
372 lesser white-fronted goose (hap2.1 2025)[IGV] Anser erythropus GCA_965277975.1_bAnsEry1.hap2.1 SAMEA113398961 PRJEB89151 2025-05-03
373 line-cheeked spinetail (hap1 2026)[IGV] Cranioleuca antisiensis GCA_060712555.1_bCraAnt1.1.hap1 SAMN57440912 PRJNA1469951 2026-09-01
374 little egret[IGV] Egretta garzetta GCF_000687185.1_ASM68718v1 SAMN02596466 PRJNA232959 2014-05-09
375 little grebe (hap1.1 2026)[IGV] Tachybaptus ruficollis GCA_987562195.1_bTacRuf1.hap1.1 SAMEA118427531 PRJEB123830 2026-09-09
376 little owl (bAthNoc1.hap1.1 2025)[IGV] Athene noctua GCF_965140245.1_bAthNoc1.hap1.1 SAMEA114594456 PRJEB85708 2025-02-13
377 little owl (hap1.1 2025)[IGV] Athene noctua GCA_965140245.1_bAthNoc1.hap1.1 SAMEA114594456 PRJEB85708 2025-02-13
378 little owl (hap2.1 2025)[IGV] Athene noctua GCA_965140185.1_bAthNoc1.hap2.1 SAMEA114594456 PRJEB85707 2025-02-13
379 long-tailed duck (alternate hap 2024)[IGV] Clangula hyemalis GCA_963989315.1_bClaHye2.1_alternate_haplotype SAMEA112468035 PRJEB73780 2024-03-14
380 long-tailed duck (primary hap 2024 genbank)[IGV] Clangula hyemalis GCA_963989345.1_bClaHye2.1 SAMEA112468035 PRJEB73781 2024-03-14
381 long-tailed duck (primary hap 2024 refseq)[IGV] Clangula hyemalis GCF_963989345.1_bClaHye2.1 SAMEA112468035 PRJEB73781 2024-03-14
382 long-tailed hermit (PSU5 alternate hap 2022)[IGV] Phaethornis superciliosus GCA_023637925.1_DD_ASM_B1a SAMN23532249 PRJNA785156 2022-06-01
383 long-tailed hermit (PSU5 alternate hap 2025)[IGV] Phaethornis superciliosus GCA_023637925.2_bPhaSup1.alt SAMN23532249 PRJNA785156 2025-02-03
384 long-tailed hermit (v2 PSU5 primary hap 2025)[IGV] Phaethornis superciliosus GCA_023637945.2_bPhaSup1.pri SAMN23532249 PRJNA785144 2025-02-06
385 Macqueen's bustard (bChlMac1 2024)[IGV] Chlamydotis macqueenii GCF_036417535.1_bChlMac1.mat SAMN39296383 PRJNA1064422 2024-02-07
386 Macqueen's bustard (BGI_N324 2014)[IGV] Chlamydotis macqueenii GCF_000695195.1_ASM69519v1 SAMN02324157 PRJNA212891 2014-06-02
387 Macqueen's bustard (maternal hap 2024)[IGV] Chlamydotis macqueenii GCA_036417535.1_bChlMac1.mat SAMN39296383 PRJNA1064422 2024-02-07
388 Macqueen's bustard (paternal 2024)[IGV] Chlamydotis macqueenii GCA_036418225.1_bChlMac1.pat SAMN39296383 PRJNA1064423 2024-02-07
389 maguari stork (bCicMag1 alternate hap 2021)[IGV] Ciconia maguari GCA_017639665.1_bCicMag1.alt SAMN18353822 PRJNA715732 2021-03-30
390 maguari stork (primary hap 2021)[IGV] Ciconia maguari GCA_017639555.1_bCicMag1.pri SAMN18353822 PRJNA715733 2021-03-30
391 mallard (CAU_Wild1.0 2019)[IGV] Anas platyrhynchos GCA_008746955.1_CAU_Wild1.0 SAMN12287667 PRJNA554956 2019-10-07
392 mallard (hap1 2024)[IGV] Anas platyrhynchos GCA_964188345.1_bAnaPla2.hap1.1 SAMEA113398833 PRJEB76742 2024-06-21
393 mallard (hap2 2024)[IGV] Anas platyrhynchos GCA_964188335.1_bAnaPla2.hap2.1 SAMEA113398833 PRJEB76741 2024-06-19
394 mallard (Pekin duck 2017)[IGV] Anas platyrhynchos platyrhynchos GCA_002743455.1_CAU_duck1.0 SAMN07569716 PRJNA403935 2017-11-03
395 mallard (Pekin duck Z2 2020 Zhejiang U)[IGV] Anas platyrhynchos GCF_015476345.1_ZJU1.0 SAMN15588841 PRJNA636121 2020-11-23
396 mallard (Pekin duck ZD024472 2025)[IGV] Anas platyrhynchos GCF_047663525.1_IASCAAS_PekinDuck_T2T SAMN46257522 PRJNA1210805 2025-02-12
397 mallard PBH1.5[IGV] Anas platyrhynchos GCF_003850225.1_IASCAAS_PekingDuck_PBH1.5 SAMN10245527 PRJNA496533 2018-11-29
398 Manx shearwater (hap1.1 2026)[IGV] Puffinus puffinus GCA_987198025.1_bPufPuf1.hap1.1 SAMEA118680465 PRJEB122738 2026-09-08
399 Mariana crow[IGV] Corvus kubaryi GCF_017639235.1_C.kubaryi_AGA036_p1.0 SAMN16883221 PRJNA680658 2021-03-30
400 marsh tit (hap1.1 2026)[IGV] Poecile palustris GCA_987201445.1_bPoePal1.hap1.1 SAMEA118680282 PRJEB122960 2026-09-08
401 Mauritius kestrel (alternate hap 2023)[IGV] Falco punctatus GCA_963210275.1_bFalPun1.1_alternate_haplotype SAMEA14356472 PRJEB65027 2023-08-19
402 Mauritius kestrel (primary hap 2023 genbank)[IGV] Falco punctatus GCA_963210335.1_bFalPun1.1 SAMEA14356472 PRJEB65028 2023-08-19
403 Mauritius kestrel (primary hap 2023 refseq)[IGV] Falco punctatus GCF_963210335.1_bFalPun1.1 SAMEA14356472 PRJEB65028 2023-08-19
404 Mauritius parakeet (alternate hap 2023)[IGV] Psittacula echo GCA_963243765.1_bPsiEch3.1_alternate_haplotype SAMEA12361725 PRJEB65272 2023-08-20
405 Mauritius parakeet (primary hap 2023 genbank)[IGV] Psittacula echo GCA_963264785.1_bPsiEch3.1 SAMEA12361725 PRJEB65273 2023-08-20
406 Mauritius parakeet (primary hap 2023 refseq)[IGV] Psittacula echo GCF_963264785.1_bPsiEch3.1 SAMEA12361725 PRJEB65273 2023-08-20
407 meadow pipit (hap1.1 2026)[IGV] Anthus pratensis GCA_987193795.1_bAntPra1.hap1.1 SAMEA117632797 PRJEB122693 2026-09-08
408 medium ground-finch[IGV] Geospiza fortis GCF_000277835.1_GeoFor_1.0 SAMN00839579 PRJNA156703 2012-07-25
409 mew gull (hap1.1 2025)[IGV] Larus canus GCA_966204495.1_bLarCan2.hap1.1 SAMEA115168455 PRJEB95784 2025-08-24
410 mew gull (hap2.1 2025)[IGV] Larus canus GCA_966207165.1_bLarCan2.hap2.1 SAMEA115168455 PRJEB95783 2025-08-24
411 monk parakeet[IGV] Myiopsitta monachus GCA_017639245.1_MMon_1.0 SAMN16846069 PRJNA679636 2021-03-30
412 Montezuma quail (F1298 2024)[IGV] Cyrtonyx montezumae GCF_038088225.1_pur_monq_1.0 SAMN40333712 PRJNA1085761 2024-04-12
413 mute swan (bCygOlo1 v2 alternate hap 2021)[IGV] Cygnus olor GCA_009769485.2_bCygOlo1.alt.v2 SAMN12621369 PRJNA561961 2021-03-30
414 mute swan (primary hap 2021)[IGV] Cygnus olor GCA_009769625.2_bCygOlo1.pri.v2 SAMN12621369 PRJNA561960 2021-03-31
415 mute swan (v2 primary hap 2021)[IGV] Cygnus olor GCF_009769625.2_bCygOlo1.pri.v2 SAMN12621369 PRJNA561960 2021-03-31
416 Nelson's sparrow (bAmmNel1 alternate hap 2023)[IGV] Ammospiza nelsoni GCA_027579665.1_bAmmNel1.alt SAMN28421656 PRJNA839457 2023-01-06
417 Nelson's sparrow (bAmmNel1 primary hap 2023 refseq)[IGV] Ammospiza nelsoni GCF_027579445.1_bAmmNel1.pri SAMN28421656 PRJNA839456 2023-01-09
418 New Caledonian crow (alternate hap 2019)[IGV] Corvus moneduloides GCA_009651025.1_bCorMon1.alt SAMN12368441 PRJNA560982 2019-11-12
419 New Caledonian crow (primary hap 2019 genbank)[IGV] Corvus moneduloides GCA_009650955.1_bCorMon1.pri SAMN12368441 PRJNA560983 2019-11-14
420 New Caledonian crow (primary hap 2019 refseq)[IGV] Corvus moneduloides GCF_009650955.1_bCorMon1.pri SAMN12368441 PRJNA560983 2019-11-14
421 Nicobar pigeon (hap1 2024 genbank)[IGV] Caloenas nicobarica GCA_036013445.1_bCalNic1.hap1 SAMN39256628 PRJNA1061158 2024-01-26
422 Nicobar pigeon (hap1 2024 refseq)[IGV] Caloenas nicobarica GCF_036013445.1_bCalNic1.hap1 SAMN39256628 PRJNA1061158 2024-01-26
423 Nicobar pigeon (hap2 2024)[IGV] Caloenas nicobarica GCA_036010745.1_bCalNic1.hap2 SAMN39256628 PRJNA1061159 2024-01-24
424 night parrot (Australia 2023)[IGV] Pezoporus occidentalis GCF_034315485.1_CSIRO_AGI_Poc_V1 SAMN38375542 PRJNA1044171 2023-12-12
425 North Island brown kiwi (hap1 2024 genbank)[IGV] Apteryx mantelli GCA_036417845.1_bAptMan1.hap1 SAMN39257886 PRJNA1061176 2024-02-06
426 North Island brown kiwi (hap1 2024 refseq)[IGV] Apteryx mantelli GCF_036417845.1_bAptMan1.hap1 SAMN39257886 PRJNA1061176 2024-02-06
427 North Island brown kiwi (hap2 2024)[IGV] Apteryx mantelli GCA_036417975.1_bAptMan1.hap2 SAMN39257886 PRJNA1061175 2024-02-06
428 northern bobwhite[IGV] Colinus virginianus GCA_008692595.2_Cv_LA_2.0 SAMN09044008 PRJNA454855 2021-04-29
429 northern fulmar[IGV] Fulmarus glacialis GCF_000690835.1_ASM69083v1 SAMN02324803 PRJNA212894 2014-05-13
430 northern gannet (hap1 2023)[IGV] Morus bassanus GCA_031468805.1_bMorBas2.hap1 SAMN37096299 PRJNA1009680 2023-09-15
431 northern gannet (hap2 2023)[IGV] Morus bassanus GCA_031468815.1_bMorBas2.hap2 SAMN37096299 PRJNA1009681 2023-09-15
432 northern goshawk (bAccGen1 v1 alternate hap 2022)[IGV] Astur gentilis GCA_929447715.1_bAccGen1.1_alternate_haplotype SAMEA8235650 PRJEB50703 2022-02-13
433 northern lapwing (hap1.1 2025 genbank)[IGV] Vanellus vanellus GCA_965231255.1_bVanVan1.hap1.1 SAMEA113398832 PRJEB87634 2025-03-28
434 northern lapwing (hap1.1 2025 refseq)[IGV] Vanellus vanellus GCF_965231255.1_bVanVan1.hap1.1 SAMEA113398832 PRJEB87634 2025-03-28
435 Northern long-tailed tit (hap1.1 2025)[IGV] Aegithalos caudatus GCA_977066295.1_bAegCau2.hap1.1 SAMEA114464538 PRJEB103975 2025-11-28
436 Northern long-tailed tit (hap2.1 2025)[IGV] Aegithalos caudatus GCA_977066235.1_bAegCau2.hap2.1 SAMEA114464538 PRJEB103974 2025-11-28
437 northern pintail (alternate hap 2024)[IGV] Anas acuta GCA_963932075.1_bAnaAcu1.1_alternate_haplotype SAMEA112468036 PRJEB72291 2024-02-07
438 northern pintail (primary hap 2024 genbank)[IGV] Anas acuta GCA_963932015.1_bAnaAcu1.1 SAMEA112468036 PRJEB72290 2024-02-07
439 northern pintail (primary hap 2024 refseq)[IGV] Anas acuta GCF_963932015.1_bAnaAcu1.1 SAMEA112468036 PRJEB72290 2024-02-07
440 Northern shoveler (hap1.1 2025)[IGV] Spatula clypeata GCA_977066335.1_bSpaCly1.hap1.1 SAMEA115433011 PRJEB103976 2025-11-28
441 Northern shoveler (hap2.1 2025)[IGV] Spatula clypeata GCA_977066225.1_bSpaCly1.hap2.1 SAMEA115433011 PRJEB103977 2025-11-28
442 northern wheatear (hap1.1 2026)[IGV] Oenanthe oenanthe GCA_987359165.1_bOenOen1.hap1.1 SAMEA118680313 PRJEB123535 2026-09-08
443 Obi paradise crow (primary hap 2025)[IGV] Lycocorax pyrrhopterus obiensis GCA_014706295.2_bLycPyr6.2.pri SAMN15881065 PRJNA604967 2025-12-17
444 Obi paradise-crow (lycPyr6 2020)[IGV] Lycocorax pyrrhopterus obiensis GCA_014706295.1_ASM1470629v1 SAMN15881065 PRJNA604967 2020-09-23
445 oilbird (hap1 2025)[IGV] Steatornis caripensis GCA_054099775.1_bSteCar1.hap1 SAMN53135924 PRJNA1359029 2025-12-18
446 oilbird (hap2 2025)[IGV] Steatornis caripensis GCA_054099845.1_bSteCar1.hap2 SAMN53135924 PRJNA1359030 2025-12-18
447 Okarito brown kiwi[IGV] Apteryx rowi GCF_003343035.1_aptRow1 SAMN08476454 PRJNA433110 2018-07-26
448 orange-headed thrush (hap1.1 2026)[IGV] Geokichla citrina GCA_987211125.1_bGeoCit1.hap1.1 SAMEA118680499 PRJEB123110 2026-09-08
449 Oriental scops-owl (oso-nibr-517 2020)[IGV] Otus sunia GCA_010365825.1_OtuSun1.0 SAMN08398467 PRJNA431699 2020-02-04
450 Oriental stork (2023)[IGV] Ciconia boyciana GCF_034638445.1_ASM3463844v1 SAMN38124791 PRJNA1036389 2023-12-27
451 Pallas's leaf-warbler (hap1.1 2026)[IGV] Phylloscopus proregulus GCA_987196345.1_bPhyPro1.hap1.1 SAMEA121237211 PRJEB122734 2026-09-08
452 peregrine falcon (bFalPer1 alternate hap 2022)[IGV] Falco peregrinus GCA_023634185.1_bFalPer1.alt SAMN28688290 PRJNA842833 2022-06-01
453 peregrine falcon (bFalPer1 primary hap 2022 refseq)[IGV] Falco peregrinus GCF_023634155.1_bFalPer1.pri SAMN28688290 PRJNA842834 2022-06-02
454 peregrine falcon (BGI 2013)[IGV] Falco peregrinus GCF_000337955.1_F_peregrinus_v1.0 SAMN02981425 PRJNA159791 2013-02-05
455 peregrine falcon (hap1.1 2025)[IGV] Falco peregrinus GCA_965282525.1_bFalPer5.hap1.1 SAMEA115433029 PRJEB89481 2025-05-18
456 peregrine falcon (hap2.1 2025)[IGV] Falco peregrinus GCA_965282645.1_bFalPer5.hap2.1 SAMEA115433029 PRJEB89480 2025-05-18
457 pheasant pigeon (hap1 2026)[IGV] Otidiphaps nobilis GCA_060712355.1_bOtiNob1.hap1 SAMN57444153 PRJNA1457091 2026-09-01
458 pin-tailed whydah (BioBank_ID:100142 2022)[IGV] Vidua macroura GCF_024509145.1_ASM2450914v1 SAMN27279399 PRJNA822827 2022-08-03
459 pink pigeon (alternate hap 2023)[IGV] Nesoenas mayeri GCA_963082445.1_bNesMay2.1_alternate_haplotype SAMEA12922160 PRJEB64782 2023-08-08
460 pink pigeon (primary hap 2023 genbank)[IGV] Nesoenas mayeri GCA_963082525.1_bNesMay2.1 SAMEA12922160 PRJEB64783 2023-08-09
461 pink pigeon (primary hap 2023 refseq)[IGV] Nesoenas mayeri GCF_963082525.1_bNesMay2.1 SAMEA12922160 PRJEB64783 2023-08-09
462 pink-footed goose (alternate hap 2024)[IGV] Anser brachyrhynchus GCA_964034845.1_bAnsBra1.1_alternate_haplotype SAMEA112468040 PRJEB75304 2024-04-26
463 pink-footed goose (primary hap 2024 genbank)[IGV] Anser brachyrhynchus GCA_964034855.1_bAnsBra1.1 SAMEA112468040 PRJEB75305 2024-04-27
464 pink-footed goose (primary hap 2024 refseq)[IGV] Anser brachyrhynchus GCF_964034855.1_bAnsBra1.1 SAMEA112468040 PRJEB75305 2024-04-27
465 plumbeous ibis (bTheCae1 alternate hap 2021)[IGV] Theristicus caerulescens GCA_020745805.1_bTheCae1.alt.cur SAMN22550094 PRJNA774321 2021-11-05
466 plumbeous ibis (primary hap 2021)[IGV] Theristicus caerulescens GCA_020745775.1_bTheCae1.pri.cur SAMN22550094 PRJNA774297 2021-11-05
467 Puerto Rican parrot (2026)[IGV] Amazona vittata GCA_980694505.1_bAmaVit1.2.curated_20260112_allscaffolds.masked SAMEA115295948 PRJEB72706 2026-02-20
468 Puerto Rican parrot (LU 182127 2020)[IGV] Amazona vittata GCA_000332375.2_ASM33237v2 SAMN02981494 PRJNA171587 2020-08-28
469 razorbill (2006_11_07_Graehlm_vinge_78 2019)[IGV] Alca torda GCA_008658365.1_bAlcTor1_primary SAMN12292087 PRJNA554520 2019-10-10
470 razorbill (alternate hap 2006_11_07_Graehlm_vinge_78 2019)[IGV] Alca torda GCA_008658355.1_bAlcTor1_alternate SAMN12292087 PRJNA554521 2019-09-23
471 red-backed fairy wren (Western Australia 2023)[IGV] Malurus melanocephalus GCF_030028575.1_MMel_1.1 SAMN33278196 PRJNA934711 2023-05-17
472 red-billed chough (hap1.1 2026)[IGV] Pyrrhocorax pyrrhocorax GCA_987488855.1_bPyrPyr1.hap1.1 SAMEA118680466 PRJEB123679 2026-09-04
473 red-billed tropicbird (maternal hap 2024 genbank)[IGV] Phaethon aethereus GCA_964289735.1_bPhaAeh10.maternal.1 SAMEA8228673 PRJEB81454 2024-10-28
474 red-billed tropicbird (maternal hap 2024 refseq)[IGV] Phaethon aethereus GCF_964289735.1_bPhaAeh10.maternal.1 SAMEA8228673 PRJEB81454 2024-10-28
475 red-billed tropicbird (paternal hap 2024)[IGV] Phaethon aethereus GCA_964289755.1_bPhaAeh10.paternal.1 SAMEA8228673 PRJEB81453 2024-10-25
476 red-crested pochard (alternate hap 2024)[IGV] Netta rufina GCA_964035535.1_bNetRuf1.1_alternate_haplotype SAMEA112468124 PRJEB75340 2024-04-28
477 red-crested pochard (primary hap 2024 genbank)[IGV] Netta rufina GCA_964035555.1_bNetRuf1.1 SAMEA112468124 PRJEB75341 2024-04-29
478 red-crested pochard (primary hap 2024 refseq)[IGV] Netta rufina GCF_964035555.1_bNetRuf1.1 SAMEA112468124 PRJEB75341 2024-04-29
479 red-crested turaco (alternate hap 2019)[IGV] Tauraco erythrolophus GCA_009764505.1_bTauEry1.alt SAMN12621036 PRJNA561948 2019-12-18
480 red-crested turaco (bTauEry1 primary hap 2019)[IGV] Tauraco erythrolophus GCF_009769465.1_bTauEry1.pri SAMN12621036 PRJNA561947 2019-12-19
481 red-crested turaco (primary hap 2019)[IGV] Tauraco erythrolophus GCA_009769465.1_bTauEry1.pri SAMN12621036 PRJNA561947 2019-12-19
482 red-fronted tinkerbird (bPogPus1 alternate hap 2020)[IGV] Pogoniulus pusillus GCA_015220175.1_bPogPus1.alt SAMN15098508 PRJNA637954 2020-11-02
483 red-fronted tinkerbird (primary hap 2020 genbank)[IGV] Pogoniulus pusillus GCA_015220805.1_bPogPus1.pri SAMN15098508 PRJNA637953 2020-11-03
484 red-fronted tinkerbird (primary hap 2020 refseq)[IGV] Pogoniulus pusillus GCF_015220805.1_bPogPus1.pri SAMN15098508 PRJNA637953 2020-11-03
485 red-legged partridge[IGV] Alectoris rufa GCA_019345075.1_ASM1934507v1 SAMN16083939 PRJNA662415 2021-07-26
486 red-legged partridge (hap1.1 2026)[IGV] Alectoris rufa GCA_987193675.1_bAleRuf2.hap1.1 SAMEA118680286 PRJEB122688 2026-09-09
487 red-legged seriema (alternate hap 2019)[IGV] Cariama cristata GCA_009819485.1_bCarCri1.alt SAMN12614807 PRJNA561893 2019-12-23
488 red-legged seriema (primary hap 2019)[IGV] Cariama cristata GCA_009819825.1_bCarCri1.pri SAMN12614807 PRJNA561892 2019-12-31
489 red-throated loon (BGI_N328 2014)[IGV] Gavia stellata GCF_000690875.1_ASM69087v1 SAMN02324832 PRJNA212895 2014-05-13
490 red-throated loon (hap1 2023)[IGV] Gavia stellata GCA_030936125.1_bGavSte3.hap1 SAMN37096312 PRJNA1008846 2023-08-30
491 red-throated loon (hap2 2023 refseq)[IGV] Gavia stellata GCF_030936135.1_bGavSte3.hap2 SAMN37096312 PRJNA1008847 2023-08-30
492 red-vreasted merganser (hap1.1 2026)[IGV] Mergus serrator GCA_977964035.1_bMerSer1.hap1.1 SAMEA113398848 PRJEB105339 2026-02-01
493 red-vreasted merganser (hap2.1 2025)[IGV] Mergus serrator GCA_977964335.1_bMerSer1.hap2.1 SAMEA113398848 PRJEB105338 2025-12-17
494 red-whiskered bulbul (hap1.1 2026)[IGV] Pycnonotus jocosus GCA_987196485.1_bPycJoc1.hap1.1 SAMEA118680504 PRJEB122740 2026-09-08
495 red-winged blackbird (hap1 2025 genbank)[IGV] Agelaius phoeniceus GCA_051311805.1_bAgePho1.hap1 SAMN48528219 PRJNA1263559 2025-07-14
496 red-winged blackbird (hap1 2025 refseq)[IGV] Agelaius phoeniceus GCF_051311805.1_bAgePho1.hap1 SAMN48528219 PRJNA1263559 2025-07-14
497 red-winged blackbird (hap2 2025)[IGV] Agelaius phoeniceus GCA_051348685.1_bAgePho1.hap2 SAMN48528219 PRJNA1263560 2025-07-15
498 red-winged blackbird (v1 BioBank_ID:100140 2023)[IGV] Agelaius phoeniceus GCF_020745825.1_Agelaius_phoeniceus_1.1 SAMN19590559 PRJNA735624 2023-03-15
499 red-winged blackbird (v3 BioBank_ID:100140 2023)[IGV] Agelaius phoeniceus GCA_020745825.3_Agelaius_phoeniceus_1.1 SAMN19590559 PRJNA735624 2023-03-15
500 rhinoceros hornbill[IGV] Buceros rhinoceros silvestris GCF_000710305.1_ASM71030v1 SAMN02318191 PRJNA212887 2014-06-25
501 rifleman (bAcaChl1 2026)[IGV] Acanthisitta chloris GCA_016904835.3_bAcaChl1.pri SAMN12621378 PRJNA561954 2026-01-23
502 rifleman (bAcaChl1 alternate hap 2021)[IGV] Acanthisitta chloris GCA_016880875.1_bAcaChl1.alt SAMN16442762 PRJNA561955 2021-02-10
503 rifleman (primary hap 2021)[IGV] Acanthisitta chloris GCA_016904835.1_bAcaChl1.pri SAMN16442762 PRJNA561954 2021-02-17
504 rifleman (primary hap 2026)[IGV] Acanthisitta chloris GCA_016904835.2_bAcaChl1.pri SAMN12621378 PRJNA561954 2026-01-23
505 ring-necked pheasant[IGV] Phasianus colchicus GCF_004143745.1_ASM414374v1 SAMN08888240 PRJNA449162 2019-02-06
506 ring-necked pheasant (hap1.1 2026)[IGV] Phasianus colchicus GCA_987193195.1_bPhaCol1.hap1.1 SAMEA118680281 PRJEB122832 2026-09-01
507 rock pigeon (Danish tumbler 2013 BGI)[IGV] Columba livia GCF_000337935.1_Cliv_1.0 SAMN02981415 PRJNA167554 2013-02-11
508 rock pigeon (Tarim TR01 2023)[IGV] Columba livia GCA_032719375.1_Trm_1.0 SAMN37449930 PRJNA1018817 2023-10-18
509 rock pigeon (v2 racing homer 2024 refseq)[IGV] Columba livia GCF_036013475.1_bColLiv1.pat.W.v2 SAMN38891892 PRJNA1054131 2024-04-08
510 rock pigeon (v2 racing homer maternal hap 2024)[IGV] Columba livia GCA_036010775.2_bColLiv1.mat.v2 SAMN38891892 PRJNA1054132 2024-04-08
511 rock pipit (hap1.1 2026)[IGV] Anthus petrosus GCA_987193735.1_bAntPet1.hap1.1 SAMEA120960975 PRJEB122690 2026-09-08
512 rock ptarmigan (bLagMut1 alternate hap 2022)[IGV] Lagopus muta GCA_023344045.1_bLagMut1_alternate SAMN25144835 PRJNA836585 2022-05-12
513 rock ptarmigan (primary hap 2022 refseq)[IGV] Lagopus muta GCF_023343835.1_bLagMut1_primary SAMN25144835 PRJNA836583 2022-05-12
514 rook (hap1.1 2026)[IGV] Corvus frugilegus GCA_987196625.1_bCorFru1.hap1.1 SAMEA118680420 PRJEB122715 2026-09-08
515 rose-ringed parakeet (hap1.1 2026)[IGV] Psittacula krameri GCA_988280925.1_bPsiKra1.hap1.1 SAMEA118680467 PRJEB126645 2026-09-17
516 ruddy duck[IGV] Oxyura jamaicensis GCF_011077185.1_BPBGC_Ojam_1.0 SAMN13257492 PRJNA588796 2020-03-10
517 ruff[IGV] Calidris pugnax GCF_001431845.1_ASM143184v1 SAMN03491621 PRJNA281024 2015-11-04
518 rufous-necked snowfinch[IGV] Pyrgilauda ruficollis GCF_017590135.1_ASM1759013v1 SAMN18252884 PRJNA417520 2021-03-26
519 rusty-margined flycatcher (MyiCay16 2022)[IGV] Myiozetetes cayanensis GCF_022539395.1_myiCay2020 SAMN25990114 PRJNA807488 2022-03-10
520 saffron-crested tyrant-manakin[IGV] Neopelma chrysocephalum GCF_003984885.1_ASM398488v2 SAMN08784363 PRJNA445439 2018-12-28
521 sage sparrow (canescens MVZ Bird 192114 alternate hap 2022)[IGV] Artemisiospiza belli GCA_021966175.1_bArtBel1.0.a SAMN24224802 PRJNA791508 2022-02-04
522 sage sparrow (canescens MVZ Bird 192114 primary hap 2022)[IGV] Artemisiospiza belli GCA_021963965.1_bArtBel1.0.p SAMN24224802 PRJNA791509 2022-02-04
523 Saker falcon (bFalChe1 alternate hap 2022)[IGV] Falco cherrug GCA_023634115.1_bFalChe1.alt SAMN28688204 PRJNA842830 2022-06-01
524 Saker falcon (BGI 2013)[IGV] Falco cherrug GCF_000337975.1_F_cherrug_v1.0 SAMN02981426 PRJNA168071 2013-02-05
525 Saker falcon (primary hap 2022 refseq)[IGV] Falco cherrug GCF_023634085.1_bFalChe1.pri SAMN28688204 PRJNA842831 2022-06-02
526 saltmarsh sparrow (bAmmCau1 alternate hap 2023)[IGV] Ammospiza caudacuta GCA_027887135.1_bAmmCau1.alt SAMN28421630 PRJNA839451 2023-01-17
527 saltmarsh sparrow (bAmmCau1 primary hap 2023 refseq)[IGV] Ammospiza caudacuta GCF_027887145.1_bAmmCau1.pri SAMN28421630 PRJNA839452 2023-01-18
528 sand martin (hap1.1 2026)[IGV] Riparia riparia GCA_987197235.1_bRipRip1.hap1.1 SAMEA118680483 PRJEB122746 2026-09-08
529 Sandwich tern (hap1.1 2026)[IGV] Thalasseus sandvicensis GCA_987195995.1_bThaSan1.hap1.1 SAMEA120961004 PRJEB122757 2026-09-08
530 Savannah sparrow (alternate hap 2023)[IGV] Passerculus sandwichensis GCA_031876245.1_bPasSan2.alt SAMN35784765 PRJNA1006783 2023-09-25
531 Savannah sparrow (FMNH 499929 alternate hap 2022)[IGV] Passerculus sandwichensis alaudinus GCA_022578375.1_bPasSan1.0.a SAMN24839580 PRJNA796787 2022-03-15
532 Savannah sparrow (FMNH 499929 primary hap 2022)[IGV] Passerculus sandwichensis alaudinus GCA_022577445.1_bPasSan1.0.p SAMN24839580 PRJNA796788 2022-03-15
533 Savannah sparrow (primary hap 2023)[IGV] Passerculus sandwichensis GCA_031885435.1_bPasSan2.pri SAMN35784765 PRJNA1006784 2023-09-25
534 scrub jay (v1 FSJ_1873_10779 2024)[IGV] Aphelocoma coerulescens GCF_041296385.1_UR_Acoe_1.0 SAMN39956395 PRJNA1076903 2024-08-16
535 scrub jay (v2 FSJ_1873_10779 2024)[IGV] Aphelocoma coerulescens GCF_041296385.2_UR_Acoe_1.0 SAMN39956395 PRJNA1076903 2024-10-21
536 seaside sparrow (alternate hap 2024)[IGV] Ammospiza maritima maritima GCA_036010685.1_bAmmMar1.alt SAMN39181024 PRJNA1060855 2024-01-17
537 seaside sparrow (bAmmMar1 primary hap 2024)[IGV] Ammospiza maritima maritima GCA_036010785.1_bAmmMar1.pri SAMN39181024 PRJNA1060856 2024-01-24
538 sedge warbler (hap2.1 2026)[IGV] Acrocephalus schoenobaenus GCA_987194645.1_bAcrSch1.hap2.1 SAMEA118680470 PRJEB122682 2026-09-08
539 Seychelles magpie-robin (hap1 2025)[IGV] Copsychus sechellarum GCA_054084125.1_bCopSec1.hap1 SAMN51285028 PRJNA1327561 2025-12-18
540 Seychelles magpie-robin (hap2 2025)[IGV] Copsychus sechellarum GCA_054084135.1_bCopSec1.hap2 SAMN51285028 PRJNA1327562 2025-12-18
541 silver-eye (hap1.1 2025 genbank)[IGV] Zosterops lateralis GCA_965231275.1_bZosLat1.hap1.1 SAMEA112953925 PRJEB87635 2025-03-28
542 silver-eye (hap1.1 2025 refseq)[IGV] Zosterops lateralis GCF_965231275.1_bZosLat1.hap1.1 SAMEA112953925 PRJEB87635 2025-03-28
543 silver-eye (hap2.1 2025)[IGV] Zosterops lateralis GCA_965231245.1_bZosLat1.hap2.1 SAMEA112953925 PRJEB87636 2025-03-28
544 small tree finch (2019)[IGV] Camarhynchus parvulus GCF_901933205.1_STF_HiC SAMEA5603054 PRJEB32528 2019-09-06
545 small tree finch (2020)[IGV] Camarhynchus parvulus GCA_902806625.1_Camarhynchus_parvulus_V1.1 SAMEA6542012 PRJEB36748 2020-03-21
546 smew (hap1.1 2025)[IGV] Mergellus albellus GCA_971847395.1_bMerAlb1.hap1.1 SAMEA112468122 PRJEB96093 2025-09-13
547 smew (hap2.1 2025)[IGV] Mergellus albellus GCA_971812175.1_bMerAlb1.hap2.1 SAMEA112468122 PRJEB96092 2025-09-13
548 Snowy owl (2025)[IGV] Bubo scandiacus GCA_965212795.1_bBubSca1.1.h1 SAMEA115805126 PRJEB77267 2025-03-20
549 song sparrow (alternate hap 2024)[IGV] Melospiza melodia melodia GCA_035771015.1_bMelMel2.alt SAMN35847297 PRJNA1006795 2024-01-17
550 song sparrow (gouldii PMB2087b alternate hap 2022)[IGV] Melospiza melodia GCA_022749775.1_bMelMel1.0.a SAMN24817870 PRJNA796323 2022-03-29
551 song sparrow (gouldii PMB2087b primary hap 2022)[IGV] Melospiza melodia GCA_022749695.1_bMelMel1.0.p SAMN24817870 PRJNA796324 2022-03-29
552 song sparrow (primary hap 2024 genbank)[IGV] Melospiza melodia melodia GCA_035770615.1_bMelMel2.pri SAMN35847297 PRJNA1006794 2024-01-24
553 song sparrow (primary hap 2024 refseq)[IGV] Melospiza melodia melodia GCF_035770615.1_bMelMel2.pri SAMN35847297 PRJNA1006794 2024-01-24
554 South Island takahe (alternate hap 2021)[IGV] Porphyrio hochstetteri GCA_020801775.1_bPorHoc1.pat.decon SAMN22550412 PRJNA774332 2021-11-08
555 South Island takahe (primary hap 2021)[IGV] Porphyrio hochstetteri GCA_020800305.1_bPorHoc1.mat.Z.cur SAMN22550412 PRJNA774331 2021-11-08
556 speckled mousebird (BGI_N325 2014)[IGV] Colius striatus GCF_000690715.1_ASM69071v1 SAMN02324230 PRJNA212892 2014-05-13
557 speckled mousebird (hap1 2023 refseq)[IGV] Colius striatus GCF_028858725.1_bColStr4.1.hap1 SAMN33339572 PRJNA936149 2023-02-24
558 speckled mousebird (hap1 2023)[IGV] Colius striatus GCA_028858725.2_bColStr4.1.hap1 SAMN33339572 PRJNA936149 2023-02-24
559 speckled mousebird (v2 hap2 2023)[IGV] Colius striatus GCA_028858625.2_bColStr4.1.hap2 SAMN33339572 PRJNA936150 2023-02-24
560 spotted flycatcher (hap1.1 2026)[IGV] Muscicapa striata GCA_988136345.1_bMusSti1.hap1.1 SAMEA118680484 PRJEB124029 2026-09-09
561 spotted owl (hap2 2023)[IGV] Strix occidentalis GCA_030819815.1_bStriOcc1.0.hap2 SAMN35669201 PRJNA982889 2023-08-18
562 Steller's jay (frontalis alternate hap 2022)[IGV] Cyanocitta stelleri GCA_026168045.1_bCyaSte1.0.a SAMN30523672 PRJNA875160 2022-11-14
563 Steller's jay (frontalis primary hap 2022)[IGV] Cyanocitta stelleri GCA_026167965.1_bCyaSte1.0.p SAMN30523672 PRJNA875161 2022-11-14
564 stock dove (hap1.1 2026)[IGV] Columba oenas GCA_987196055.1_bColOen2.hap1.1 SAMEA117632806 PRJEB122709 2026-09-08
565 sun parakeet (2019)[IGV] Aratinga solstitialis GCA_902168055.1_ARATINGA-SOLSTITIALIS-ASSEMBLY-PRJEB33153 SAMEA5743801 PRJEB33153 2019-11-14
566 sunbittern[IGV] Eurypyga helias GCF_000690775.1_ASM69077v1 SAMN02324546 PRJNA212893 2014-05-13
567 Suruca trogon (bTroSur1 alternate hap 2021)[IGV] Trogon surrucura GCA_020746095.1_bTroSur1.alt.cur SAMN22550082 PRJNA774296 2021-11-05
568 Suruca trogon (primary hap 2021)[IGV] Trogon surrucura GCA_020746105.1_bTroSur1.pri.cur SAMN22550082 PRJNA774295 2021-11-05
569 Swainson's thrush (bCatUst1 v2 alternate hap 2020)[IGV] Catharus ustulatus GCA_009819505.2_bCatUst1.alt.v2 SAMN12618602 PRJNA561934 2020-11-05
570 Swainson's thrush (primary hap 2020)[IGV] Catharus ustulatus GCA_009819885.2_bCatUst1.pri.v2 SAMN12618602 PRJNA561933 2020-12-22
571 Swainson's thrush (v2 primary hap 2020)[IGV] Catharus ustulatus GCF_009819885.2_bCatUst1.pri.v2 SAMN12618602 PRJNA561933 2020-12-22
572 swamp sparrow (bMelGeo1 alternate hap 2023)[IGV] Melospiza georgiana GCA_028019105.1_bMelGeo1.alt SAMN22787412 PRJNA915610 2023-01-26
573 swamp sparrow (bMelGeo1 primary hap 2023 refseq)[IGV] Melospiza georgiana GCF_028018845.1_bMelGeo1.pri SAMN22787412 PRJNA915609 2023-01-31
574 Swan (goose HZ-2024a 2024)[IGV] Anser cygnoides GCF_040182565.1_Taihu_goose_T2T_genome SAMN41386743 PRJNA1111257 2024-06-14
575 Swan (goose T2T HZ-2024a 2024)[IGV] Anser cygnoides GCA_040182565.1_Taihu_goose_T2T_genome SAMN41386743 PRJNA1111257 2024-06-14
576 swan goose (Sichuan white goose 2017)[IGV] Anser cygnoides GCF_002166845.1_GooseV1.0 SAMN02898389 PRJNA253976 2017-06-02
577 swan goose (Tianfu 2020)[IGV] Anser cygnoides GCA_013030995.1_ASM1303099v1 SAMN13281505 PRJNA589208 2020-05-11
578 swan goose (Zhedong 2015)[IGV] Anser cygnoides domesticus GCF_000971095.1_AnsCyg_PRJNA183603_v1.0 SAMN01830643 PRJNA183603 2015-04-08
579 swift parrot (hap1 2024)[IGV] Lathamus discolor GCF_037157495.1_bLatDis1.hap1 SAMN40289871 PRJNA1085017 2024-03-15
580 Swift parrot (hap2 2024)[IGV] Lathamus discolor GCA_037157625.1_bLatDis1.hap2 SAMN40289871 PRJNA1085018 2024-03-15
581 Taiga bean goose (alternate hap 2025)[IGV] Anser fabalis GCA_965250455.1_bAnsFab1.1_alternate_haplotype SAMEA113398846 PRJEB88627 2025-04-20
582 Taiga bean goose (primary hap 2025)[IGV] Anser fabalis GCA_965250395.1_bAnsFab1.1 SAMEA113398846 PRJEB88628 2025-04-20
583 tawny frogmouth (bPodStr1 alternate hap 2023)[IGV] Podargus strigoides GCA_028020675.1_bPodStr1.alt SAMN31801959 PRJNA912328 2023-01-26
584 tawny frogmouth (bPodStr1 primary hap 2023)[IGV] Podargus strigoides GCA_028020825.1_bPodStr1.pri SAMN31801959 PRJNA912327 2023-01-31
585 Tawny owl (bStrAlu1hap1 2023)[IGV] Strix aluco GCF_031877795.1_bStrAlu1.hap1 SAMN37055808 PRJNA1007267 2023-09-25
586 tawny owl (hap1 2023)[IGV] Strix aluco GCA_031877795.1_bStrAlu1.hap1 SAMN37055808 PRJNA1007267 2023-09-25
587 tawny owl (hap2 2023)[IGV] Strix aluco GCA_031877785.1_bStrAlu1.hap2 SAMN37055808 PRJNA1007266 2023-09-25
588 tawny-flanked prinia (Zambia CZ2003 2024)[IGV] Prinia subflava GCF_021018805.1_Cam_Psub_1.2 SAMN20994451 PRJNA758068 2024-01-26
589 Tibetan ground-tit (2013)[IGV] Pseudopodoces humilis GCF_000331425.1_PseHum1.0 SAMN02981490 PRJNA175930 2013-01-11
590 Tibetan ground-tit (2021_Gansu_Grassland_sample_001 2025)[IGV] Pseudopodoces humilis GCF_049639895.1_ASM4963989v1 SAMN44580345 PRJNA1182069 2025-04-15
591 tourmaline sunangel (hap1 2024 refseq)[IGV] Heliangelus exortis GCF_036169615.1_bHelExo1.hap1 SAMN37253778 PRJNA1012326 2024-01-26
592 tourmaline sunangel (hap2 2024)[IGV] Heliangelus exortis GCA_036172335.1_bHelExo1.hap2 SAMN37253778 PRJNA1012325 2024-01-26
593 tree pipit (hap1.1 2026)[IGV] Anthus trivialis GCA_987193405.1_bAntTri1.hap1.1 SAMEA118680469 PRJEB122694 2026-09-03
594 tree swallow (Ithaca 2401-50270 2024)[IGV] Tachycineta bicolor GCA_007636935.2_TRES_AUg29_2020 SAMN12236919 PRJNA553513 2024-06-03
595 tricolored blackbird (1412-34295 alternate hap 2022)[IGV] Agelaius tricolor GCA_023055385.1_bAgeTri1.0.a SAMN25872474 PRJNA810501 2022-04-19
596 tricolored blackbird (1412-34295 primary hap 2022 refseq)[IGV] Agelaius tricolor GCF_023055355.1_bAgeTri1.0.p SAMN25872474 PRJNA810502 2022-04-19
597 tufted duck (2019)[IGV] Aythya fuligula GCF_009819795.1_bAytFul2.pri SAMN12621346 PRJNA561952 2019-12-31
598 tufted duck (alternate hap 2019)[IGV] Aythya fuligula GCA_009819845.1_bAytFul2.alt SAMN12621346 PRJNA561953 2019-12-23
599 tufted duck (primary hap 2019)[IGV] Aythya fuligula GCA_009819795.1_bAytFul2.pri SAMN12621346 PRJNA561952 2019-12-31
600 tufted duck (primary hap 2025)[IGV] Aythya fuligula GCA_976225485.1_bAytFul3.1 SAMEA113398827 PRJEB97887 2025-10-26
601 tufted titmouse (bBaeBic1hap1 2026)[IGV] Baeolophus bicolor GCA_055754725.1_bBaeBic1.hap1 SAMN55933867 PRJNA1427876 2026-03-09
602 tufted titmouse (hap2 2026)[IGV] Baeolophus bicolor GCA_055761795.1_bBaeBic1.hap2 SAMN55933867 PRJNA1427877 2026-03-10
603 tundra swan (alternate hap 2025)[IGV] Cygnus columbianus GCA_965151595.1_bCygCol1.1_alternate_haplotype SAMEA112468031 PRJEB85808 2025-02-15
604 tundra swan (primary hap 2025 genbank)[IGV] Cygnus columbianus GCA_965151615.1_bCygCol1.1 SAMEA112468031 PRJEB85807 2025-02-15
605 tundra swan (primary hap 2025 refseq)[IGV] Cygnus columbianus GCF_965151615.1_bCygCol1.1 SAMEA112468031 PRJEB85807 2025-02-14
606 turkey (Aviagen NT-WF06-2002-E0010 2014)[IGV] Meleagris gallopavo GCF_000146605.3_Turkey_5.1 SAMN02981253 PRJNA42129 2014-11-24
607 turkey (WU_HG_1 2021 genbank)[IGV] Meleagris gallopavo GCA_905368555.1_MGAL_WU_HG_1.0 SAMEA7852930 PRJEB42643 2021-03-26
608 turkey (WU_HG_1 2026 refseq)[IGV] Meleagris gallopavo GCF_905368555.1_MGAL_WU_HG_1.1 SAMEA7852930 PRJEB42643 2026-05-18
609 Ural owl (ZFMK-TIS-50842 2025)[IGV] Strix uralensis GCF_047716275.1_bStrUra1 SAMN46363354 PRJNA1212906 2025-02-12
610 village indigobird (merged hap OUT-0048 2022 genbank)[IGV] Vidua chalybeata GCA_026979565.1_bVidCha1_merged_haplotype SAMN12254000 PRJNA889055 2022-12-21
611 village indigobird (merged hap OUT-0048 2022 refseq)[IGV] Vidua chalybeata GCF_026979565.1_bVidCha1_merged_haplotype SAMN12254000 PRJNA889055 2022-12-21
612 village indigobird (purged dups hap OUT-0048 2022)[IGV] Vidua chalybeata GCA_026979555.1_bVidCha1_purged_dups_haplotype SAMN12254000 PRJNA889056 2022-12-16
613 Virginia rail (171378401 alternate hap 2022)[IGV] Rallus limicola GCA_022605895.1_bRalLim1.0.a SAMN24505263 PRJNA794194 2022-03-17
614 Virginia rail (171378401 primary hap 2022)[IGV] Rallus limicola GCA_022605955.1_bRalLim1.0.p SAMN24505263 PRJNA794195 2022-03-17
615 water rail (alternate hap 2025)[IGV] Rallus aquaticus GCA_965250415.1_bRalAqu1.1_alternate_haplotype SAMEA113398957 PRJEB88632 2025-04-20
616 water rail (primary hap 2025)[IGV] Rallus aquaticus GCA_965250365.1_bRalAqu1.1 SAMEA113398957 PRJEB88631 2025-04-20
617 western capercaillie (alternate hap 2023)[IGV] Tetrao urogallus GCA_951394355.1_bTetUro1.1_alternate_haplotype SAMEA9654429 PRJEB62069 2023-05-13
618 western capercaillie (primary hap 2023 genbank)[IGV] Tetrao urogallus GCA_951394365.1_bTetUro1.1 SAMEA9654429 PRJEB62070 2023-06-15
619 western capercaillie (primary hap 2023 refseq)[IGV] Tetrao urogallus GCF_951394365.1_bTetUro1.1 SAMEA9654429 PRJEB62070 2023-06-15
620 western gull (hap1.1 2025)[IGV] Larus occidentalis GCA_965654455.1_bLarOcc1.hap1.1 SAMEA115348658 PRJEB94824 2025-08-03
621 western gull (hap2.1 2025)[IGV] Larus occidentalis GCA_965654445.1_bLarOcc1.hap2.1 SAMEA115348658 PRJEB94825 2025-08-03
622 western jackdaw (hap1.1 2025)[IGV] Coloeus monedula GCF_965178545.1_bColMon1.hap1.1 SAMEA115433023 PRJEB86324 2025-03-04
623 western scrub-jay (hap1 CA MVZ Bird 193978 2023)[IGV] Aphelocoma californica GCA_028536675.1_bAphCal1.0.hap1 SAMN31837216 PRJNA904314 2023-02-07
624 western scrub-jay (hap2 CA MVZ Bird 193978 2023)[IGV] Aphelocoma californica GCA_028536645.1_bAphCal1.0.hap2 SAMN31837216 PRJNA904313 2023-02-07
625 western yellow wagtail (hap1.1 2026)[IGV] Motacilla flava GCA_987196375.1_bMotFla1.hap1.1 SAMEA118680314 PRJEB122731 2026-09-02
626 whiskered treeswift (bHemCom1 alternate hap 2021)[IGV] Hemiprocne comata GCA_020745695.1_bHemCom1.alt.cur SAMN22588383 PRJNA774830 2021-11-05
627 whiskered treeswift (primary hap 2021)[IGV] Hemiprocne comata GCA_020745705.1_bHemCom1.pri.cur SAMN22588383 PRJNA774831 2021-11-05
628 white leghorn X broiler chicken (v2 leghorn haplotype 2021)[IGV] Gallus gallus GCF_016700215.2_bGalGal1.pat.whiteleghornlayer.GRCg7w SAMN15960293 PRJNA660758 2021-10-01
629 white stork (hap1.1 2026)[IGV] Ciconia ciconia GCA_987196565.1_bCicCic1.hap1.1 SAMEA118427542 PRJEB122704 2026-09-08
630 white wagtail[IGV] Motacilla alba alba GCF_015832195.1_Motacilla_alba_V1.0_pri SAMN16093224 PRJNA662706 2020-12-08
631 white-breasted nuthatch (hap1 2025)[IGV] Sitta carolinensis GCA_054054645.1_bSitCar1.hap1 SAMN51863556 PRJNA1334393 2025-12-17
632 white-breasted nuthatch (hap2 2025)[IGV] Sitta carolinensis GCA_054054655.1_bSitCar1.hap2 SAMN51863556 PRJNA1334392 2025-12-17
633 white-collared manakin (Guabito, Panama 608988 2022)[IGV] Manacus candei GCF_025592945.1_ASM2559294v1 SAMN30181648 PRJNA867001 2022-10-05
634 white-crowned manakin (hap1 2024 genbank)[IGV] Pseudopipra pipra GCA_036250125.1_bDixPip1.hap1 SAMN32739894 PRJNA1057371 2024-01-31
635 white-crowned manakin (hap1 2024 refseq)[IGV] Pseudopipra pipra GCF_036250125.1_bDixPip1.hap1 SAMN32739894 PRJNA1057371 2024-01-31
636 white-crowned manakin (hap2 2024)[IGV] Pseudopipra pipra GCA_036250135.1_bDixPip1.hap2 SAMN32739894 PRJNA1057370 2024-01-31
637 white-fronted goose (hap1.1 2025 genbank)[IGV] Anser albifrons GCA_976913865.1_bAnsAlb1.hap1.1 SAMEA115433003 PRJEB97127 2025-10-26
638 white-fronted goose (hap2.1 2025 refseq)[IGV] Anser albifrons GCA_976916765.1_bAnsAlb1.hap2.1 SAMEA115433003 PRJEB97126 2025-10-27
639 white-plumed antbird (INPA30051 2025)[IGV] Pithys albifrons albifrons GCF_047495875.1_PitAlb_v1 SAMN45682346 PRJNA1196901 2025-02-07
640 white-ruffed manakin[IGV] Corapipo altera GCF_003945725.1_ASM394572v1 SAMN10424454 PRJNA505529 2018-12-14
641 white-rumped munia (lonStrDom1 primary hap 2025)[IGV] Lonchura striata GCF_050655825.1_ASM5065582v1 SAMN47007390 PRJNA1228306 2025-06-02
642 white-rumped munia (maternal hap 2024 genbank)[IGV] Lonchura striata GCA_046129695.1_bLonStr1.mat SAMN44779081 PRJNA1186962 2024-12-18
643 white-rumped munia (maternal hap 2024 refseq)[IGV] Lonchura striata GCF_046129695.1_bLonStr1.mat SAMN44779081 PRJNA1186962 2024-12-18
644 white-rumped munia (paternal hap 2024)[IGV] Lonchura striata GCA_046129705.1_bLonStr1.pat SAMN44779081 PRJNA1186963 2024-12-17
645 white-rumped snowfinch[IGV] Onychostruthus taczanowskii GCF_017590055.1_ASM1759005v1 SAMN18252883 PRJNA417520 2021-03-26
646 white-tailed eagle (BGI_N329 2014)[IGV] Haliaeetus albicilla GCF_000691405.1_ASM69140v1 SAMN02333670 PRJNA212896 2014-05-15
647 white-tailed eagle (bHalAlb1.1 alternate hap 2022)[IGV] Haliaeetus albicilla GCA_947461935.1_bHalAlb1.1_alternate_haplotype SAMEA12857288 PRJEB57864 2022-12-02
648 white-tailed eagle (primary hap 2022 refseq)[IGV] Haliaeetus albicilla GCF_947461875.1_bHalAlb1.1 SAMEA12857288 PRJEB57865 2022-12-06
649 white-tailed ptarmigan[IGV] Lagopus leucura GCF_019238085.1_USGS_WTPT01 SAMN12859112 PRJNA574481 2021-07-15
650 white-tailed tropicbird[IGV] Phaethon lepturus GCF_000687285.1_ASM68728v1 SAMN02339888 PRJNA212902 2014-05-08
651 white-throated dipper (alternate hap 2023)[IGV] Cinclus cinclus GCA_963662415.1_bCinCin1.1_alternate_haplotype SAMEA9679959 PRJEB68421 2023-12-07
652 white-throated dipper (primary hap 2023 genbank)[IGV] Cinclus cinclus GCA_963662255.1_bCinCin1.1 SAMEA9679959 PRJEB68422 2023-12-11
653 white-throated dipper (primary hap 2023 refseq)[IGV] Cinclus cinclus GCF_963662255.1_bCinCin1.1 SAMEA9679959 PRJEB68422 2023-12-11
654 white-throated sparrow (bZonAlb1hap1 2025)[IGV] Zonotrichia albicollis GCF_047830755.1_bZonAlb1.hap1 SAMN46390924 PRJNA1214919 2025-02-18
655 white-throated sparrow (hap1 2025)[IGV] Zonotrichia albicollis GCA_047830755.1_bZonAlb1.hap1 SAMN46390924 PRJNA1214919 2025-02-18
656 white-throated sparrow (hap2 2025)[IGV] Zonotrichia albicollis GCA_047774235.1_bZonAlb1.hap2 SAMN46390924 PRJNA1214920 2025-02-18
657 white-throated sparrow (Tan morph 2013)[IGV] Zonotrichia albicollis GCF_000385455.1_Zonotrichia_albicollis-1.0.1 SAMN02981528 PRJNA197293 2013-04-30
658 white-throated tinamou (BGI_N309 2014)[IGV] Tinamus guttatus GCF_000705375.1_ASM70537v2 SAMN02316659 PRJNA212876 2014-08-05
659 white-throated tinamou (Peru 2026)[IGV] Tinamus guttatus GCF_059628265.1_ASM5962826v1 SAMN57442443 PRJNA1457013 2026-07-27
660 whooping crane (maternal hap 2023 refseq)[IGV] Grus americana GCF_028858705.1_bGruAme1.mat SAMN32775697 PRJNA924953 2023-02-24
661 whooping crane (paternal hap 2023)[IGV] Grus americana GCA_028858595.1_bGruAme1.pat SAMN32775697 PRJNA924954 2023-02-24
662 willow flycatcher[IGV] Empidonax traillii GCF_003031625.1_ASM303162v1 SAMN08663748 PRJNA437496 2018-04-03
663 willow warbler (hap1.1 2026)[IGV] Phylloscopus trochilus GCA_987197715.1_bPhyTrc2.hap1.1 SAMEA118680309 PRJEB122737 2026-09-08
664 wire-tailed manakin (2020)[IGV] Pipra filicauda GCF_003945595.2_ASM394559v2 SAMN08774045 PRJNA445296 2020-12-01
665 wood lark (hap1.1 2026)[IGV] Lullula arborea GCA_987195895.1_bLulArb1.hap1.1 SAMEA118680290 PRJEB122726 2026-08-02
666 wood nuthatch (2025)[IGV] Sitta europaea GCA_965153155.1_bSitEur1.h1.1 SAMEA117562482 PRJEB83849 2025-12-05
667 wood stork (Jacksonville Zoo and Gardens JAX WOST 10 2024)[IGV] Mycteria americana GCF_035582795.1_USCA_MyAme_1.0 SAMN36274196 PRJNA990753 2024-01-12
668 wrentit (frontalis MVZ Bird 193981 alternate hap 2023)[IGV] Chamaea fasciata GCA_029207785.1_bChaFas1.0.hap2 SAMN33386005 PRJNA936926 2023-03-14
669 wrentit (frontalis MVZ Bird 193981 primary hap 2023 refseq)[IGV] Chamaea fasciata GCF_029207755.1_bChaFas1.0.hap1 SAMN33386005 PRJNA936927 2023-03-14
670 Xingu scale-backed antbird (hap1 2024)[IGV] Willisornis vidua GCA_045364795.1_bWilVid1_haplotype_1 SAMN44516465 PRJNA1180198 2024-12-02
671 Xingu scale-backed antbird (hap2 2024)[IGV] Willisornis vidua GCA_045364805.1_bWilVid1_haplotype_2 SAMN44516465 PRJNA1180201 2024-12-02
672 yellow warbler (LACM:Birds122168 alternate hap 2022)[IGV] Setophaga petechia GCA_024372515.1_bSetPet1.0.a SAMN29044059 PRJNA851102 2022-07-21
673 yellow warbler (LACM:Birds122168 primary hap 2022)[IGV] Setophaga petechia GCA_024362935.1_bSetPet1.0.p SAMN29044059 PRJNA851103 2022-07-22
674 yellow-crowned parrot (bAmaOch1hap1 2024)[IGV] Amazona ochrocephala GCA_039720435.1_bAmaOch1.hap1 SAMN41018448 PRJNA1102367 2024-05-24
675 yellow-crowned parrot (bAmaOch1hap2 2024)[IGV] Amazona ochrocephala GCA_039720425.1_bAmaOch1.hap2 SAMN41018448 PRJNA1102368 2024-05-24
676 yellow-legged gull (bLarMic1.1_alternate_haplotype 2024)[IGV] Larus michahellis GCA_964199725.1_bLarMic1.1_alternate_haplotype SAMEA114211328 PRJEB77561 2024-07-13
677 yellow-legged gull (hap1.2 2025)[IGV] Larus michahellis GCA_964199755.2_bLarMic1.hap1.2 SAMEA114211328 PRJEB77562 2025-07-31
678 yellow-legged gull (primary hap 2024 genbank)[IGV] Larus michahellis GCA_964199755.1_bLarMic1.1 SAMEA114211328 PRJEB77562 2024-07-14
679 yellow-legged gull (primary hap 2024 refseq)[IGV] Larus michahellis GCF_964199755.1_bLarMic1.1 SAMEA114211328 PRJEB77562 2024-07-14
680 yellow-throated sandgrouse (alternate hap 2019)[IGV] Pterocles gutturalis GCA_009769505.1_bPteGut1.alt SAMN12623217 PRJNA561959 2019-12-19
681 yellow-throated sandgrouse (primary hap 2019)[IGV] Pterocles gutturalis GCA_009769525.1_bPteGut1.pri SAMN12623217 PRJNA561958 2019-12-23
682 yellowhammer (hap1.1 2026)[IGV] Emberiza citrinella GCA_987217005.1_bEmbCit1.hap1.1 SAMEA117632795 PRJEB123181 2026-09-08
683 zebra finch (2025)[IGV] Taeniopygia guttata GCF_048771995.1_bTaeGut7.mat SAMN47142318 PRJNA1229770 2025-03-21
684 zebra finch (alternate hap Black17 2018)[IGV] Taeniopygia guttata GCA_003957525.1_bTaeGut1_v1.h SAMN02981239 PRJNA489099 2018-12-20
685 zebra finch (alternate hap Blue55 v1 2020)[IGV] Taeniopygia guttata GCA_009859025.1_bTaeGut2.p.v1.alt SAMN09946140 PRJNA489187 2020-01-13
686 zebra finch (Black17 v1.4 alternate hap 2021)[IGV] Taeniopygia guttata GCA_003957525.2_bTaeGut1.4.alt SAMN02981239 PRJNA489099 2021-04-28
687 zebra finch (Blue55 female 2020 genbank)[IGV] Taeniopygia guttata GCA_009859065.2_bTaeGut2.pri.v2 SAMN09946140 PRJNA489186 2020-04-01
688 zebra finch (Blue55 paternal 2019)[IGV] Taeniopygia guttata GCA_008822125.1_bTaeGut2pat SAMN09946140 PRJNA489101 2019-10-03
689 zebra finch (Blue55 paternal W 2020)[IGV] Taeniopygia guttata GCF_008822105.2_bTaeGut2.pat.W.v2 SAMN09946140 PRJNA555095 2020-02-12
690 zebra finch (bTaeGut7 maternal hap 2025)[IGV] Taeniopygia guttata GCA_048771995.1_bTaeGut7.mat SAMN47142318 PRJNA1229770 2025-03-21
691 zebra finch (bTaeGut7 paternal hap 2025)[IGV] Taeniopygia guttata GCA_048772025.1_bTaeGut7.pat SAMN47142318 PRJNA1229769 2025-03-21
692 zebra finch (v1.4 Blue55 female primary hap 2021 refseq)[IGV] Taeniopygia guttata GCF_003957565.2_bTaeGut1.4.pri SAMN02981239 PRJNA489098 2021-05-04
693 zebra finch (v3 Blue55 maternal 2020)[IGV] Taeniopygia guttata GCA_008822115.3_bTaeGut2.mat.v3 SAMN09946140 PRJNA489100 2020-02-21

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 628 assemblies assembly stats track stats
Mammals 1006 assemblies assembly stats track stats
Birds 693 assemblies assembly stats track stats
Fishes 923 assemblies assembly stats track stats
other vertebrates 538 assemblies assembly stats track stats
Invertebrates 2002 assemblies assembly stats track stats
Plants 466 assemblies assembly stats track stats
Fungi 4137 assemblies assembly stats track stats
Viruses 15117 assemblies assembly stats track stats
Archaea 2977 assemblies assembly stats track stats
Bacteria 23961 assemblies assembly stats track stats
legacy/superseded 691 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1303 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 464 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 5522 assemblies assembly stats track stats