1 |
acorn woodpecker (bairdi alternate hap 2022)[IGV] |
Melanerpes formicivorus |
GCA_026170555.1_bMelFor1.0.a |
SAMN30523671 |
PRJNA875157 |
2022-11-14 |
birds
|
2 |
acorn woodpecker (bairdi primary hap 2022)[IGV] |
Melanerpes formicivorus |
GCA_026170545.1_bMelFor1.0.p |
SAMN30523671 |
PRJNA875158 |
2022-11-14 |
birds
|
3 |
American black bear (L20-20 alternate hap 2022)[IGV] |
Ursus americanus |
GCA_024610745.1_mUrsAme1.0.a |
SAMN29046565 |
PRJNA851482 |
2022-08-10 |
mammals
|
4 |
American black bear (L20-20 primary hap 2022)[IGV] |
Ursus americanus |
GCA_024610735.1_mUrsAme1.0.p |
SAMN29046565 |
PRJNA851483 |
2022-08-10 |
mammals
|
5 |
American ruby spot damselfly (1083.01 alternate hap 2022)[IGV] |
Hetaerina americana |
GCA_022747625.1_ioHetAmer1.0.a |
SAMN24913893 |
PRJNA796998 |
2022-03-28 |
insects
|
6 |
American ruby spot damselfly (1083.01 primary hap 2022)[IGV] |
Hetaerina americana |
GCA_022747635.1_ioHetAmer1.0.p |
SAMN24913893 |
PRJNA796999 |
2022-03-28 |
insects
|
7 |
ant C.vicinus (PSW18456_S1 2022)[IGV] |
Camponotus vicinus |
GCA_025532165.1_iyCamVici1.0 |
SAMN30501363 |
PRJNA874059 |
2022-10-03 |
insects
|
8 |
arroyo chub (AC-1 alternate hap 2022)[IGV] |
Gila orcuttii |
GCA_026230005.1_fGilOrc1.0.hap1 |
SAMN31536034 |
PRJNA896189 |
2022-11-18 |
fish
|
9 |
arroyo chub (AC-1 primary hap 2022)[IGV] |
Gila orcuttii |
GCA_026230025.1_fGilOrc1.0.hap2 |
SAMN31536034 |
PRJNA896188 |
2022-11-18 |
fish
|
10 |
bay (USA: Berkeley CA var. californica CCGP_DODD_UMBCAL_S1 alternate hap 2023)[IGV] |
Umbellularia californica |
GCA_028538565.1_dmUmbCali1.0.hap2 |
SAMN30524115 |
PRJNA887119 |
2023-02-07 |
plants
|
11 |
bay (USA: Berkeley CA var. californica CCGP_DODD_UMBCAL_S1 primary hap 2023)[IGV] |
Umbellularia californica |
GCA_028534965.1_dmUmbCali1.0.hap1 |
SAMN30524115 |
PRJNA887120 |
2023-02-07 |
plants
|
12 |
bigberry manzanita (GLNDR_RDG_Rd-6 2022)[IGV] |
Arctostaphylos glauca |
GCA_019985065.2_ddArcGlau1.1p |
SAMN19489519 |
PRJNA735273 |
2022-02-20 |
plants
|
13 |
bigberry manzanita (GLNDR_RDG_Rd-6 alternate hap 2021)[IGV] |
Arctostaphylos glauca |
GCA_019985075.1_ddArcGlau1.0.a |
SAMN19489519 |
PRJNA735272 |
2021-09-14 |
plants
|
14 |
black abalone (W230 alternate hap 2022)[IGV] |
Haliotis cracherodii |
GCA_022045225.1_xgHalCrac1.a |
SAMN22937412 |
PRJNA778265 |
2022-02-07 |
invertebrate
|
15 |
black abalone (W230 primary hap 2022)[IGV] |
Haliotis cracherodii |
GCA_022045235.1_xgHalCrac1.p |
SAMN22937412 |
PRJNA778266 |
2022-02-08 |
invertebrate
|
16 |
black cottonwood (Ptri.A.LA.226.w1 alternate hap 2023)[IGV] |
Populus trichocarpa |
GCA_028534865.1_ddPopTric1.0.hap2 |
SAMN29046698 |
PRJNA887116 |
2023-02-07 |
plants
|
17 |
black cottonwood (Ptri.A.LA.226.w1 primary hap 2023)[IGV] |
Populus trichocarpa |
GCA_028534895.1_ddPopTric1.0.hap1 |
SAMN29046698 |
PRJNA887117 |
2023-02-07 |
plants
|
18 |
black perch (LCO1_2020_lvr alternate hap 2022)[IGV] |
Embiotoca jacksoni |
GCA_022578405.1_fEmbJac1.0.a |
SAMN24959158 |
PRJNA796978 |
2022-03-15 |
fish
|
19 |
black perch (LCO1_2020_lvr primary hap 2022)[IGV] |
Embiotoca jacksoni |
GCA_022577435.1_fEmbJac1.0.p |
SAMN24959158 |
PRJNA796979 |
2022-03-15 |
fish
|
20 |
Blainville's horned lizard (alternate hap 2022)[IGV] |
Phrynosoma blainvillii |
GCA_026167975.1_rPhrBla1.0.hap2 |
SAMN29046554 |
PRJNA873121 |
2022-11-14 |
reptiles
|
21 |
Blainville's horned lizard (primary hap 2022)[IGV] |
Phrynosoma blainvillii |
GCA_026167985.1_rPhrBla1.0.hap1 |
SAMN29046554 |
PRJNA873122 |
2022-11-14 |
reptiles
|
22 |
bobcat (Redwood Valley CCGP_SWC_20201006 alternate hap 2022)[IGV] |
Lynx rufus |
GCA_022079275.1_mLynRuf1.a |
SAMN23391104 |
PRJNA782956 |
2022-02-08 |
mammals
|
23 |
bobcat (Redwood Valley CCGP_SWC_20201006 primary hap 2022)[IGV] |
Lynx rufus |
GCF_022079265.1_mLynRuf1.p |
SAMN23391104 |
PRJNA782957 |
2022-02-08 |
mammals
|
24 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 alternate hap 2022)[IGV] |
Thomomys bottae |
GCA_024803775.1_mThoBot1.0.a |
SAMN29044214 |
PRJNA851165 |
2022-08-31 |
mammals
|
25 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 primary hap 2022)[IGV] |
Thomomys bottae |
GCA_024803745.1_mThoBot1.0.p |
SAMN29044214 |
PRJNA851166 |
2022-09-01 |
mammals
|
26 |
California black rail (168171201 alternate hap 2022)[IGV] |
Laterallus jamaicensis coturniculus |
GCA_022605925.1_bLatJam1.0.a |
SAMN24505262 |
PRJNA794173 |
2022-03-17 |
birds
|
27 |
California black rail (168171201 primary hap 2022)[IGV] |
Laterallus jamaicensis coturniculus |
GCA_022605575.1_bLatJam1.0.p |
SAMN24505262 |
PRJNA794174 |
2022-03-17 |
birds
|
28 |
California black walnut (Jcal.S.LA.6 alternate hap 2022)[IGV] |
Juglans californica |
GCA_023349545.1_dhJugClai1.0.a |
SAMN25062275 |
PRJNA807333 |
2022-05-12 |
plants
|
29 |
California black walnut (Jcal.S.LA.6 primary hap 2022)[IGV] |
Juglans californica |
GCA_023349395.1_dhJugCali1.0.p |
SAMN25062275 |
PRJNA807334 |
2022-05-12 |
plants
|
30 |
California glossy snake (A.elegans occidentalis HBS 135684 alternate hap 2022)[IGV] |
Arizona elegans |
GCA_022578425.1_rAriEle1.0.a |
SAMN24818160 |
PRJNA796780 |
2022-03-15 |
reptiles
|
31 |
California glossy snake (A.elegans occidentalis HBS 135684 primary hap 2022)[IGV] |
Arizona elegans |
GCA_022577455.1_rAriEle1.0.p |
SAMN24818160 |
PRJNA796781 |
2022-03-15 |
reptiles
|
32 |
California mussel (2022)[IGV] |
Mytilus californianus |
GCF_021869535.1_xbMytCali1.0.p |
SAMN24505264 |
PRJNA796333 |
2022-02-02 |
invertebrate
|
33 |
California mussel (M0D057914Y alternate hap 2022)[IGV] |
Mytilus californianus |
GCA_021869935.1_xbMytCali1.0.a |
SAMN24505264 |
PRJNA796332 |
2022-02-02 |
invertebrate
|
34 |
California quail (MVZ:Bird:193975 alternate hap 2022)[IGV] |
Callipepla californica brunnescens |
GCA_023055725.1_bCalCai1.0.a |
SAMN26894057 |
PRJNA819181 |
2022-04-19 |
birds
|
35 |
California quail (MVZ:Bird:193975 primary hap 2022)[IGV] |
Callipepla californica brunnescens |
GCA_023055505.1_bCalCai1.0.p |
SAMN26894057 |
PRJNA819182 |
2022-05-05 |
birds
|
36 |
California scrub oak (Qber.S.LA.60 alternate hap 2023)[IGV] |
Quercus berberidifolia |
GCA_028535905.1_dhQueBerb1.0.hap2 |
SAMN29046699 |
PRJNA887128 |
2023-02-07 |
plants
|
37 |
California scrub oak (Qber.S.LA.60 primary hap 2023)[IGV] |
Quercus berberidifolia |
GCA_028535815.1_dhQueBerb1.0.hap1 |
SAMN29046699 |
PRJNA887129 |
2023-02-07 |
plants
|
38 |
California sheephead (SPU_LCO1_2020_fin alternate hap 2022)[IGV] |
Semicossyphus pulcher |
GCA_022749735.1_fSemPul1.0.a |
SAMN25656429 |
PRJNA807365 |
2022-03-29 |
fish
|
39 |
California sheephead (SPU_LCO1_2020_fin primary hap 2022)[IGV] |
Semicossyphus pulcher |
GCA_022749685.1_fSemPul1.0.p |
SAMN25656429 |
PRJNA807366 |
2022-03-29 |
fish
|
40 |
California vole (kernensis MVZ Mamm 240107 primary hap 2023)[IGV] |
Microtus californicus |
GCA_028537955.1_mMicCal1.0.hap1 |
SAMN31837211 |
PRJNA904290 |
2023-02-07 |
mammals
|
41 |
California vole (kernensis MVZ Mamm 240107 alternate hap 2023)[IGV] |
Microtus californicus |
GCA_028537755.1_mMicCal1.0.hap2 |
SAMN31837211 |
PRJNA904289 |
2023-02-07 |
mammals
|
42 |
gopher snake (HBS135680 alternate hap 2023)[IGV] |
Pituophis catenifer annectens |
GCA_029215685.1_rPitCat1.0.hap2 |
SAMN33386007 |
PRJNA937313 |
2023-03-14 |
reptiles
|
43 |
gopher snake (HBS135680 primary hap 2023)[IGV] |
Pituophis catenifer annectens |
GCA_029215655.1_rPitCat1.0.hap1 |
SAMN33386007 |
PRJNA937314 |
2023-03-14 |
reptiles
|
44 |
interior live oak (QUWIS_CCGP_1 alternate hap 2022)[IGV] |
Quercus wislizeni |
GCA_023055485.1_dhQueWisl1.0.a |
SAMN26368104 |
PRJNA819167 |
2022-04-19 |
plants
|
45 |
interior live oak (QUWIS_CCGP_1 primary hap 2022)[IGV] |
Quercus wislizeni |
GCA_023055345.1_dhQueWisl1.0.p |
SAMN26368104 |
PRJNA819168 |
2022-04-19 |
plants
|
46 |
island oak (RSA801373 alternate hap 2023)[IGV] |
Quercus tomentella |
GCA_028535165.1_dhQueTome1.0.hap2 |
SAMN29046697 |
PRJNA887122 |
2023-02-07 |
plants
|
47 |
island oak (RSA801373 primary hap 2023)[IGV] |
Quercus tomentella |
GCA_028535515.1_dhQueTome1.0.hap1 |
SAMN29046697 |
PRJNA887123 |
2023-02-07 |
plants
|
48 |
little pocket mouse (longimembris alternate hap 2022)[IGV] |
Perognathus longimembris |
GCA_024363435.1_mPerLon1.0.a |
SAMN29044251 |
PRJNA855967 |
2022-07-21 |
mammals
|
49 |
little pocket mouse (longimembris primary hap 2022)[IGV] |
Perognathus longimembris |
GCA_024363575.1_mPerLon1.0.p |
SAMN29044251 |
PRJNA855968 |
2022-07-21 |
mammals
|
50 |
longjawed orb weaver (CCGP_RG_IND1 alternate hap 2022)[IGV] |
Tetragnatha versicolor |
GCA_024610695.1_qqTetVers1.0.a |
SAMN29044170 |
PRJNA852227 |
2022-08-10 |
arachnid
|
51 |
longjawed orb weaver (CCGP_RG_IND1 primary hap 2022)[IGV] |
Tetragnatha versicolor |
GCA_024610705.1_qqTetVers1.0.p |
SAMN29044170 |
PRJNA852228 |
2022-08-10 |
arachnid
|
52 |
Merriam's kangaroo rat (MVZ:Mamm:240054 alternate hap 2022)[IGV] |
Dipodomys merriami |
GCA_024711525.1_mDipMer1.0.a |
SAMN29046532 |
PRJNA851459 |
2022-08-18 |
mammals
|
53 |
Merriam's kangaroo rat (MVZ:Mamm:240054 primary hap 2022)[IGV] |
Dipodomys merriami |
GCA_024711535.1_mDipMer1.0.p |
SAMN29046532 |
PRJNA851460 |
2022-08-18 |
mammals
|
54 |
monkeyface prickleback (CVI_PGR_0920_01 alternate hap 2022)[IGV] |
Cebidichthys violaceus |
GCA_023349535.1_fCebVio1.0.a |
SAMN25872352 |
PRJNA807353 |
2022-05-12 |
fish
|
55 |
monkeyface prickleback (CVI_PGR_0920_01 primary hap 2022)[IGV] |
Cebidichthys violaceus |
GCA_023349555.1_fCebVio1.0.p |
SAMN25872352 |
PRJNA807354 |
2022-05-12 |
fish
|
56 |
North American deer mouse (MVZ:Mamm:240117 alternate hap 2022)[IGV] |
Peromyscus maniculatus sonoriensis |
GCA_026167925.1_mPerMan1.0.a |
SAMN29044276 |
PRJNA851173 |
2022-11-14 |
mammals
|
57 |
North American deer mouse (MVZ:Mamm:240117 primary hap 2022)[IGV] |
Peromyscus maniculatus sonoriensis |
GCA_026229955.1_mPerMan1.0.p |
SAMN29044276 |
PRJNA851174 |
2022-11-14 |
mammals
|
58 |
northern elephant seal (CCGP_5_RB_7025 alternate hap 2023)[IGV] |
Mirounga angustirostris |
GCA_029215635.1_mMirAng1.0.hap2 |
SAMN33386026 |
PRJNA937320 |
2023-03-14 |
mammals
|
59 |
northern elephant seal (CCGP_5_RB_7025 primary hap 2023)[IGV] |
Mirounga angustirostris |
GCA_029215605.1_mMirAng1.0.hap1 |
SAMN33386026 |
PRJNA937321 |
2023-03-15 |
mammals
|
60 |
northern rubber boa (HBS 135849 alternate hap 2022)[IGV] |
Charina bottae |
GCA_023362785.1_rChaBot1.0.a |
SAMN26367999 |
PRJNA824888 |
2022-05-13 |
reptiles
|
61 |
northern rubber boa (HBS 135849 primary hap 2022)[IGV] |
Charina bottae |
GCA_023362775.1_rChaBot1.0.p |
SAMN26367999 |
PRJNA824889 |
2022-05-13 |
reptiles
|
62 |
Northwestern pond turtle (WTP2003 alternate hap 2022)[IGV] |
Actinemys marmorata |
GCA_022086895.1_rActMar1.a |
SAMN21436765 |
PRJNA778209 |
2022-02-08 |
reptiles
|
63 |
Northwestern pond turtle (WTP2003 primary hap 2022)[IGV] |
Actinemys marmorata |
GCA_022086475.1_rActMar1.p |
SAMN21436765 |
PRJNA778210 |
2022-02-09 |
reptiles
|
64 |
puma (L17-30 alternate hap 2023)[IGV] |
Puma concolor |
GCA_028749965.1_mPumCon1.0.hap2 |
SAMN30567381 |
PRJNA887114 |
2023-02-06 |
mammals
|
65 |
puma (L17-30 primary hap 2023)[IGV] |
Puma concolor |
GCA_028749985.1_mPumCon1.0.hap1 |
SAMN30567381 |
PRJNA887115 |
2023-02-21 |
mammals
|
66 |
red abalone (VD_foot alternate hap 2022)[IGV] |
Haliotis rufescens |
GCA_023055495.1_xgHalRufe1.0.a |
SAMN26275698 |
PRJNA819158 |
2022-04-19 |
invertebrate
|
67 |
red abalone (VD_foot primary hap 2022)[IGV] |
Haliotis rufescens |
GCF_023055435.1_xgHalRufe1.0.p |
SAMN26275698 |
PRJNA819159 |
2022-04-19 |
invertebrate
|
68 |
Ringneck snake (HBS135679 primary hap 2022)[IGV] |
Diadophis punctatus similis |
GCA_023053685.1_rDiaPun1.0.p |
SAMN25872410 |
PRJNA810488 |
2022-04-19 |
reptiles
|
69 |
sage sparrow (canescens MVZ Bird 192114 alternate hap 2022)[IGV] |
Artemisiospiza belli |
GCA_021966175.1_bArtBel1.0.a |
SAMN24224802 |
PRJNA791508 |
2022-02-04 |
birds
|
70 |
sage sparrow (canescens MVZ Bird 192114 primary hap 2022)[IGV] |
Artemisiospiza belli |
GCA_021963965.1_bArtBel1.0.p |
SAMN24224802 |
PRJNA791509 |
2022-02-04 |
birds
|
71 |
San Diegan legless lizard (HBS135921 alternate hap 2023)[IGV] |
Anniella stebbinsi |
GCA_029215795.1_rAnnSte1.0.hap2 |
SAMN33386066 |
PRJNA938518 |
2023-03-14 |
reptiles
|
72 |
San Diegan legless lizard (HBS135921 primary hap 2023)[IGV] |
Anniella stebbinsi |
GCA_029215775.1_rAnnSte1.0.hap1 |
SAMN33386066 |
PRJNA938519 |
2023-03-14 |
reptiles
|
73 |
San Diegan tiger whiptail (HBS 135688 alternate hap 2022)[IGV] |
Aspidoscelis tigris stejnegeri |
GCA_023333555.1_rAspTig1.0.a |
SAMN25872408 |
PRJNA810477 |
2022-05-11 |
reptiles
|
74 |
San Diegan tiger whiptail (HBS 135688 primary hap 2022)[IGV] |
Aspidoscelis tigris stejnegeri |
GCA_023333525.1_rAspTig1.0.p |
SAMN25872408 |
PRJNA810478 |
2022-05-11 |
reptiles
|
75 |
San Diego alligator lizard (HBS135686 alternate hap 2022)[IGV] |
Elgaria multicarinata webbii |
GCA_023053675.1_rElgMul1.0.a |
SAMN25872353 |
PRJNA810482 |
2022-04-19 |
reptiles
|
76 |
San Diego alligator lizard (HBS135686 primary hap 2022)[IGV] |
Elgaria multicarinata webbii |
GCA_023053635.1_rElgMul1.0.p |
SAMN25872353 |
PRJNA810483 |
2022-04-19 |
reptiles
|
77 |
San Diego ringneck snake (HBS135679 alternate hap 2022)[IGV] |
Diadophis punctatus similis |
GCA_023053665.1_rDiaPun1.0.a |
SAMN25872410 |
PRJNA810487 |
2022-04-19 |
reptiles
|
78 |
sandblossoms (Phelan CA IGA184 alternate hap 2022)[IGV] |
Linanthus parryae |
GCA_023055565.1_ddLinParr1.0.a |
SAMN26264369 |
PRJNA819153 |
2022-04-19 |
plants
|
79 |
sandblossoms (Phelan CA IGA184 primary hap 2022)[IGV] |
Linanthus parryae |
GCA_023055425.1_ddLinParr1.0.p |
SAMN26264369 |
PRJNA819154 |
2022-04-19 |
plants
|
80 |
Savannah sparrow (FMNH 499929 alternate hap 2022)[IGV] |
Passerculus sandwichensis alaudinus |
GCA_022578375.1_bPasSan1.0.a |
SAMN24839580 |
PRJNA796787 |
2022-03-15 |
birds
|
81 |
Savannah sparrow (FMNH 499929 primary hap 2022)[IGV] |
Passerculus sandwichensis alaudinus |
GCA_022577445.1_bPasSan1.0.p |
SAMN24839580 |
PRJNA796788 |
2022-03-15 |
birds
|
82 |
song sparrow (gouldii PMB2087b alternate hap 2022)[IGV] |
Melospiza melodia |
GCA_022749775.1_bMelMel1.0.a |
SAMN24817870 |
PRJNA796323 |
2022-03-29 |
birds
|
83 |
song sparrow (gouldii PMB2087b primary hap 2022)[IGV] |
Melospiza melodia |
GCA_022749695.1_bMelMel1.0.p |
SAMN24817870 |
PRJNA796324 |
2022-03-29 |
birds
|
84 |
Southern Pacific rattlesnake (HBS135844 alternate hap 2022)[IGV] |
Crotalus oreganus helleri |
GCA_024509165.1_rCroOre1.a |
SAMN25872349 |
PRJNA807341 |
2022-08-03 |
reptiles
|
85 |
Southern Pacific rattlesnake (HBS135844 primary hap 2022)[IGV] |
Crotalus oreganus helleri |
GCA_024509115.1_rCroOre1.0.p |
SAMN25872349 |
PRJNA807342 |
2022-08-04 |
reptiles
|
86 |
Southwestern pond turtle (HBS135687 alternate hap 2022)[IGV] |
Actinemys pallida |
GCA_023634275.1_rActPal1.0.a |
SAMN25872472 |
PRJNA810503 |
2022-06-01 |
reptiles
|
87 |
Southwestern pond turtle (HBS135687 primary hap 2022)[IGV] |
Actinemys pallida |
GCA_023634205.1_rActPal1.0.p |
SAMN25872472 |
PRJNA810504 |
2022-06-01 |
reptiles
|
88 |
starburst anemone (CCGP_MDBC_AS_20200803 alternate hap 2022)[IGV] |
Anthopleura sola |
GCA_023349385.1_jaAntSola1.0.a |
SAMN24505220 |
PRJNA794852 |
2022-05-12 |
invertebrate
|
89 |
starburst anemone (CCGP_MDBC_AS_20200803 primary hap 2022)[IGV] |
Anthopleura sola |
GCA_023349425.1_jaAntSola1.0.p |
SAMN24505220 |
PRJNA794853 |
2022-05-12 |
invertebrate
|
90 |
starfish (M0D059179O alternate hap 2022)[IGV] |
Pisaster brevispinus |
GCA_023634265.1_eaPisBrev1.0.a |
SAMN26263536 |
PRJNA810505 |
2022-06-01 |
invertebrate
|
91 |
starfish (M0D059179O primary hap 2022)[IGV] |
Pisaster brevispinus |
GCA_023634235.1_eaPisBrev1.0.p |
SAMN26263536 |
PRJNA810506 |
2022-06-01 |
invertebrate
|
92 |
Steller's jay (frontalis alternate hap 2022)[IGV] |
Cyanocitta stelleri |
GCA_026168045.1_bCyaSte1.0.a |
SAMN30523672 |
PRJNA875160 |
2022-11-14 |
birds
|
93 |
Steller's jay (frontalis primary hap 2022)[IGV] |
Cyanocitta stelleri |
GCA_026167965.1_bCyaSte1.0.p |
SAMN30523672 |
PRJNA875161 |
2022-11-14 |
birds
|
94 |
tidewater goby (DKJ021-1_F 2022)[IGV] |
Eucyclogobius newberryi |
GCA_026437355.1_fEucNew1.0.hap2 |
SAMN31536049 |
PRJNA896218 |
2022-11-28 |
fish
|
95 |
tidewater goby (DKJ021-1_F 2022)[IGV] |
Eucyclogobius newberryi |
GCA_026437365.1_fEucNew1.0.hap1 |
SAMN31536049 |
PRJNA896219 |
2022-11-28 |
fish
|
96 |
Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022)[IGV] |
Corynorhinus townsendii |
GCA_026230055.1_mCorTow1.0.hap1 |
SAMN31536067 |
PRJNA896196 |
2022-11-18 |
mammals
|
97 |
Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022)[IGV] |
Corynorhinus townsendii |
GCA_026230045.1_mCorTow1.0.hap2 |
SAMN31536067 |
PRJNA896195 |
2022-11-18 |
mammals
|
98 |
toyon (HeAr 88 alternate hap 2022)[IGV] |
Heteromeles arbutifolia |
GCA_024363235.1_drHetArbu1.0.a |
SAMN29046707 |
PRJNA851486 |
2022-07-21 |
plants
|
99 |
toyon (HeAr 88 primary hap 2022)[IGV] |
Heteromeles arbutifolia |
GCA_024362995.1_drHetArbu1.0.p |
SAMN29046707 |
PRJNA851487 |
2022-07-21 |
plants
|
100 |
tricolored blackbird (1412-34295 alternate hap 2022)[IGV] |
Agelaius tricolor |
GCA_023055385.1_bAgeTri1.0.a |
SAMN25872474 |
PRJNA810501 |
2022-04-19 |
birds
|
101 |
tricolored blackbird (1412-34295 primary hap 2022)[IGV] |
Agelaius tricolor |
GCA_023055355.1_bAgeTri1.0.p |
SAMN25872474 |
PRJNA810502 |
2022-04-19 |
birds
|
102 |
valley gartersnake (HBS 135685 alternate hap 2023)[IGV] |
Thamnophis sirtalis fitchi |
GCA_029207655.1_rThaSir1.0.hap2 |
SAMN26367981 |
PRJNA913137 |
2023-03-14 |
reptiles
|
103 |
valley gartersnake (HBS 135685 primary hap 2023)[IGV] |
Thamnophis sirtalis fitchi |
GCA_029207665.1_rThaSir1.0.hap1 |
SAMN26367981 |
PRJNA913138 |
2023-03-14 |
reptiles
|
104 |
Van Houtte's columbine (alt alternate hap PFEx6 2022)[IGV] |
Aquilegia eximia |
GCA_023053535.1_dmAquExim1.0.a |
SAMN25872407 |
PRJNA810485 |
2022-04-19 |
plants
|
105 |
Van Houtte's columbine (PFEx6 primary hap 2022)[IGV] |
Aquilegia eximia |
GCA_023053565.1_dmAquExim1.0.p |
SAMN25872407 |
PRJNA810486 |
2022-04-19 |
plants
|
106 |
vernal pool fairy shrimp B.lindahli (BRLI_1 2022)[IGV] |
Branchinecta lindahli |
GCA_023053555.1_BRLI_1.1 |
SAMN26264342 |
PRJNA811226 |
2022-04-19 |
invertebrate
|
107 |
vernal pool fairy shrimp B.lynchi (BRLY_001 2022)[IGV] |
Branchinecta lynchi |
GCA_023053575.1_BRLY_1.1 |
SAMN26264359 |
PRJNA811230 |
2022-04-19 |
invertebrate
|
108 |
vernal pool tadpole shrimp L.packardi (LEPA_1 2022)[IGV] |
Lepidurus packardi |
GCA_023053545.1_LEPA1.1 |
SAMN26264343 |
PRJNA811174 |
2022-04-19 |
invertebrate
|
109 |
Virginia rail (171378401 alternate hap 2022)[IGV] |
Rallus limicola |
GCA_022605895.1_bRalLim1.0.a |
SAMN24505263 |
PRJNA794194 |
2022-03-17 |
birds
|
110 |
Virginia rail (171378401 primary hap 2022)[IGV] |
Rallus limicola |
GCA_022605955.1_bRalLim1.0.p |
SAMN24505263 |
PRJNA794195 |
2022-03-17 |
birds
|
111 |
western fence lizard (IW3139 2022)[IGV] |
Sceloporus occidentalis |
GCA_023333635.1_rSceOcc1.0.a |
SAMN27480378 |
PRJNA824882 |
2022-05-11 |
reptiles
|
112 |
western fence lizard (IW3139 primary hap 2022)[IGV] |
Sceloporus occidentalis |
GCA_023333645.1_rSceOcc1.0.p |
SAMN27480378 |
PRJNA824883 |
2022-05-11 |
reptiles
|
113 |
western red-tailed skink (HBS 135693 alternate hap 2022)[IGV] |
Plestiodon gilberti rubricaudatus |
GCA_026170595.1_rPleGil1.0.hap2 |
SAMN30523592 |
PRJNA874060 |
2022-11-14 |
reptiles
|
114 |
western red-tailed skink (HBS 135693 primary hap 2022)[IGV] |
Plestiodon gilberti rubricaudatus |
GCA_026170395.1_rPleGil1.0.hap1 |
SAMN30523592 |
PRJNA874061 |
2022-11-14 |
reptiles
|
115 |
western scrub-jay (CA MVZ Bird 193978 2023)[IGV] |
Aphelocoma californica |
GCA_028536645.1_bAphCal1.0.hap2 |
SAMN31837216 |
PRJNA904313 |
2023-02-07 |
birds
|
116 |
western scrub-jay (CA MVZ Bird 193978 2023)[IGV] |
Aphelocoma californica |
GCA_028536675.1_bAphCal1.0.hap1 |
SAMN31837216 |
PRJNA904314 |
2023-02-07 |
birds
|
117 |
western spadefoot toad (HBS 135690 2023)[IGV] |
Spea hammondii |
GCA_029215705.1_aSpeHam1.0.hap1 |
SAMN33386125 |
PRJNA938521 |
2023-03-15 |
amphibians
|
118 |
western spadefoot toad (HBS 135690 2023)[IGV] |
Spea hammondii |
GCA_029215755.1_aSpeHam1.0.hap2 |
SAMN33386125 |
PRJNA938520 |
2023-03-14 |
amphibians
|
119 |
woolly sculpin (CAN_PGR_092001 alternate hap 2022)[IGV] |
Clinocottus analis |
GCA_023055415.1_fCliAna1.0.a |
SAMN26368113 |
PRJNA819175 |
2022-04-19 |
fish
|
120 |
woolly sculpin (CAN_PGR_092001 primary hap 2022)[IGV] |
Clinocottus analis |
GCA_023055335.1_fCliAna1.0.p |
SAMN26368113 |
PRJNA819176 |
2022-04-19 |
fish
|
121 |
wrentit (frontalis MVZ Bird 193981 alternate hap 2023)[IGV] |
Chamaea fasciata |
GCA_029207785.1_bChaFas1.0.hap2 |
SAMN33386005 |
PRJNA936926 |
2023-03-14 |
birds
|
122 |
wrentit (frontalis MVZ Bird 193981 primary hap 2023)[IGV] |
Chamaea fasciata |
GCA_029207755.1_bChaFas1.0.hap1 |
SAMN33386005 |
PRJNA936927 |
2023-03-14 |
birds
|
123 |
yellow warbler (LACM:Birds122168 alternate hap 2022)[IGV] |
Setophaga petechia |
GCA_024372515.1_bSetPet1.0.a |
SAMN29044059 |
PRJNA851102 |
2022-07-21 |
birds
|
124 |
yellow warbler (LACM:Birds122168 primary hap 2022)[IGV] |
Setophaga petechia |
GCA_024362935.1_bSetPet1.0.p |
SAMN29044059 |
PRJNA851103 |
2022-07-22 |
birds
|
125 |
Yuma myotis (MYYU_CA2020_CCGP alternate hap 2023)[IGV] |
Myotis yumanensis |
GCA_028536395.1_mMyoYum1.0.hap2 |
SAMN30526064 |
PRJNA887415 |
2023-02-07 |
mammals
|
126 |
Yuma myotis (MYYU_CA2020_CCGP primary hap 2023)[IGV] |
Myotis yumanensis |
GCA_028538775.1_mMyoYum1.0.hap1 |
SAMN30526064 |
PRJNA887416 |
2023-02-10 |
mammals
|