Fish Genomes assembly hubs, assembly statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of fish only.

See also: hub access, track statistics

Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.

count	common name link to genome browser	scientific name and data download	NCBI assembly	sequence count	genome size nucleotides	gap count	unknown bases (gap size sum)	masking percent
1	Acadian redfish (alternate hap 2024)	Sebastes fasciatus	GCA_043250585.1_fSebFas1.alt	11,377	834,216,046	0	0	45.07
2	Acadian redfish (fSebFas1 primary hap 2024 refseq)	Sebastes fasciatus	GCF_043250625.1_fSebFas1.pri	204	833,851,473	472	84,201	37.07
3	alewife (anadromous, Long Island Sound Yale_2024_CS 2024)	Alosa pseudoharengus	GCF_046254945.1_YU_APseudo_1.1	329	1,050,070,452	1,061	207,652	52.49
4	alligator pipefish (LvHL_M 2021)	Syngnathoides biaculeatus	GCF_019802595.1_ASM1980259v1	143	636,535,704	144	14,400	38.03
5	allis shad	Alosa alosa	GCF_017589495.1_AALO_Geno_1.1	1,095	854,464,681	1,541	767,536	38.87
6	Amazon molly	Poecilia formosa	GCF_000485575.1_Poecilia_formosa-5.1.2	3,985	748,923,461	36,429	34,735,552	26.04
7	amberjack S.aureovittata (China HTS-2021-v1 2021)	Seriola aureovittata	GCF_021018895.1_ASM2101889v1	31	647,095,223	150	75,500	26.68
8	American shad (fAloSap1 alternate hap 2021)	Alosa sapidissima	GCA_018492705.1_fAloSap1.alt	5,410	852,425,339	1	20	38.65
9	American shad (primary hap 2021)	Alosa sapidissima	GCA_018492685.1_fAloSap1.pri	73	903,564,947	1,639	4,995,812	47.70
10	American shad (primary hap 2021)	Alosa sapidissima	GCF_018492685.1_fAloSap1.pri	74	903,581,644	1,639	4,995,812	39.49
11	Andean cavefish (hap1 2023 genbank)	Trichomycterus rosablanca	GCA_030014385.1_fTriRos1.hap1	349	1,045,025,885	198	39,600	49.04
12	Andean cavefish (hap1 2023 refseq)	Trichomycterus rosablanca	GCF_030014385.1_fTriRos1.hap1	349	1,045,025,885	198	39,600	49.04
13	annual killifish	Austrofundulus limnaeus	GCF_001266775.1_Austrofundulus_limnaeus-1.0	29,784	866,963,076	1,025,519	172,836,531	28.75
14	annular seabream (2025)	Diplodus annularis	GCA_977110885.1_fDipAnn1.1	28	780,857,085	23	2,700	30.67
15	Antarctic jonasfish (primary hap 2024)	Notolepis coatsorum	GCA_963971535.1_fNotCoa1.1	5,983	3,427,809,033	15,113	3,020,567	68.42
16	Antarctic lanternfish (alternate hap 2023)	Electrona antarctica	GCA_951214905.1_fEleAnt2.1_alternate_haplotype	11,436	1,301,265,211	0	0	47.62
17	Antarctic lanternfish (primary hap 2023)	Electrona antarctica	GCA_951216825.1_fEleAnt2.1	1,901	1,427,445,741	3,179	635,800	52.88
18	Antarctic lanternfish (primary hap 2023)	Electrona antarctica	GCF_951216825.1_fEleAnt2.1	1,901	1,427,445,741	3,179	635,800	59.83
19	Antarctic spiny plunderfish (primary hap 2020)	Harpagifer antarcticus	GCA_902827135.1_fHarAnt1.1	1,541	941,503,312	1,039	113,043	43.03
20	Arctic char (2024)	Salvelinus alpinus	GCF_045679555.1_SLU_Salpinus.1	939	2,367,887,750	3,854	385,400	56.53
21	Arctic char (CBP00131 primary hap 2024)	Salvelinus alpinus oquassa	GCA_036784965.1_fSalAlp2_p1.0	1,169	2,129,031,653	3,235	647,000	58.15
22	Arctic char (hap1 2025)	Salvelinus alpinus	GCA_054100595.1_fSalAlp3.hap1	1,443	2,264,666,818	4,441	888,200	56.53
23	Arctic char (hap2 2025)	Salvelinus alpinus	GCA_054100575.1_fSalAlp3.hap2	1,796	2,008,814,543	4,287	857,400	55.57
24	Arctic char (IW2-2015 2018)	Salvelinus sp. IW2-2015	GCF_002910315.2_ASM291031v2	15,253	2,169,549,916	1,718,015	148,387,905	44.87
25	Aristotle's catfish (alternate hap 2022)	Silurus aristotelis	GCA_946807865.1_fSilAri3.1_alternate_haplotype	7,617	713,076,206	0	0	40.74
26	Aristotle's catfish (primary hap 2022)	Silurus aristotelis	GCA_946808225.1_fSilAri3.1	241	800,118,513	795	159,000	42.15
27	Arkansas darter	Etheostoma cragini	GCF_013103735.1_CSU_Ecrag_1.0	4,664	643,078,674	35,052	3,314,141	26.64
28	arroyo chub (AC-1 alternate hap 2022)	Gila orcuttii	GCA_026230005.1_fGilOrc1.0.hap1	179	1,263,410,250	327	32,700	50.53
29	arroyo chub (AC-1 primary hap 2022)	Gila orcuttii	GCA_026230025.1_fGilOrc1.0.hap2	341	1,272,848,069	318	31,800	50.58
30	Asian bonytongue (2019)	Scleropages formosus	GCF_900964775.1_fSclFor1.1	72	784,563,014	145	41,360	26.53
31	Asian bonytongue (alternate hap)	Scleropages formosus	GCA_900964985.2_fSclFor1.1_alternate_haplotype	2,006	751,313,211	1	25	26.29
32	Asian redtail catfish (EC202008001 2021)	Hemibagrus wyckioides	GCF_019097595.1_SWU_Hwy_1.0	73	789,816,092	107	10,700	37.39
33	Atlantic bluefin tuna (alternate hap 2024)	Thunnus thynnus	GCA_963924655.1_fThuThy2.1_alternate_haplotype	3,713	806,472,619	2	400	33.61
34	Atlantic bluefin tuna (primary hap 2024 genbank)	Thunnus thynnus	GCA_963924715.1_fThuThy2.1	120	799,063,593	468	93,600	33.12
35	Atlantic bluefin tuna (primary hap 2024 refseq)	Thunnus thynnus	GCF_963924715.1_fThuThy2.1	119	799,047,066	468	93,600	33.12
36	Atlantic cod (2019)	Gadus morhua	GCF_902167405.1_gadMor3.0	227	669,966,409	1,216	23,573,743	33.47
37	Atlantic cod (alternate hap)	Gadus morhua	GCA_902167395.1_gadMor3.0_alternate_haplotype	3,592	584,119,146	3	75	33.87
38	Atlantic halibut (2019 refseq)	Hippoglossus hippoglossus	GCF_009819705.1_fHipHip1.pri	57	596,792,615	290	3,413,390	24.17
39	Atlantic halibut (alternate hap 2019)	Hippoglossus hippoglossus	GCA_009819745.1_fHipHip1.alt	4,053	676,690,381	62	3,468	24.50
40	Atlantic herring (v2)	Clupea harengus	GCF_900700415.2_Ch_v2.0.2	1,724	786,325,606	1,990	870,691	32.57
41	Atlantic horse mackerel (alternate hap 2021)	Trachurus trachurus	GCA_905171655.2_fTraTra1.2_alternate_haplotype	1,049	797,027,743	74	4,927	32.73
42	Atlantic horse mackerel (primary hap 2021)	Trachurus trachurus	GCA_905171665.2_fTraTra1.2	153	801,243,942	222	29,162	32.85
43	Atlantic mackerel (alternate hap 2023)	Scomber scombrus	GCA_963691945.1_fScoSco1.1_alternate_haplotype	4,905	731,363,837	12	2,400	28.33
44	Atlantic mackerel (primary hap 2023 genbank)	Scomber scombrus	GCA_963691925.1_fScoSco1.1	666	764,157,853	1,489	297,822	29.96
45	Atlantic mackerel (primary hap 2023 refseq)	Scomber scombrus	GCF_963691925.1_fScoSco1.1	665	764,141,294	1,489	297,822	29.96
46	Atlantic salmon (refseq 2021)	Salmo salar	GCF_905237065.1_Ssal_v3.1	4,011	2,756,584,103	211	21,100	59.39
47	Atlantic salmon (Sally 2015)	Salmo salar	GCF_000233375.1_ICSASG_v2	232,152	2,966,861,068	138,207	348,002,350	51.87
48	Atlantic silverside (fMenMen1 hap1 2025)	Menidia menidia	GCA_048628825.1_ASM4862882v1	457	571,276,089	867	86,700	28.90
49	Atlantic silverside (fMenMen1 hap2 2025)	Menidia menidia	GCA_048544195.1_ASM4854419v1	567	553,547,304	804	80,400	28.19
50	Atlantic turbot (AOZZmale01 2020)	Scophthalmus maximus	GCF_013347765.1_ASM1334776v1	127	556,696,898	51	2,160	25.82
51	Australian ruff (RE-2024a hap1 2024)	Arripis georgiana	GCA_042242115.1_fArrGeo1.hap1	625	735,099,811	91	18,000	33.44
52	Australian ruff (RE-2024a hap2 2024)	Arripis georgiana	GCA_042242135.1_fArrGeo1.hap2	552	801,586,327	98	19,400	38.19
53	ballan wrasse (2016)	Labrus bergylta	GCF_900080235.1_BallGen_V1	13,466	805,480,521	257	137,791	30.40
54	ballan wrasse (alternate hap 2024)	Labrus bergylta	GCA_963930765.1_fLabBer1.1_alternate_haplotype	2,798	695,444,047	6	1,200	29.65
55	ballan wrasse (primary hap 2024 genbank)	Labrus bergylta	GCA_963930695.1_fLabBer1.1	132	720,227,340	815	163,000	30.38
56	ballan wrasse (primary hap 2024 refseq)	Labrus bergylta	GCF_963930695.1_fLabBer1.1	131	720,210,020	815	163,000	30.38
57	banded archerfish (alternate hap 2021)	Toxotes jaculatrix	GCA_017976295.1_fToxJac2.alt	2,393	594,660,453	2	26	26.52
58	banded archerfish (primary hap 2021 refseq)	Toxotes jaculatrix	GCF_017976425.1_fToxJac2.pri	96	621,503,431	98	1,137,472	28.10
59	banded electric knifefish (BG-103 2025)	Brachyhypopomus gauderio	GCF_052324685.1_BGAUD_0.2	840	796,923,666	810	401,750	36.45
60	banded killifish (hap1 2024)	Fundulus diaphanus	GCA_037039145.1_fFunDia1.hap1	331	1,351,828,608	293	3,461,740	50.48
61	banded killifish (hap2 2024)	Fundulus diaphanus	GCA_037038625.1_fFunDia1.hap2	196	1,329,922,595	373	6,322,172	50.37
62	barbel (alternate hap 2022)	Barbus barbus	GCA_936446605.1_fBarBab1.1_alternate_haplotype	8,034	1,319,370,800	1	200	52.21
63	barbel (primary hap 2021)	Barbus barbus	GCF_936440315.1_fBarBab1.1	91	1,584,913,304	108	21,600	47.31
64	barbel (primary hap 2022)	Barbus barbus	GCA_936440315.1_fBarBab1.1	92	1,584,929,904	108	21,600	52.50
65	barramundi perch (ASB-BC8 2022)	Lates calcarifer	GCF_001640805.2_TLL_Latcal_v3	2,997	673,814,222	674	7,539,228	23.61
66	beardfish (hap1 2025)	Polymixia lowei	GCA_047511565.1_fPolLow2.hap1	327	675,344,950	752	150,427	30.33
67	beardfish (hap2 2025)	Polymixia lowei	GCA_047511595.1_fPolLow2.hap2	199	671,709,512	756	151,025	30.40
68	Bermuda beardfish (OG660 hap1 2025)	Polymixia cf. hollisterae	GCA_048537225.1_ASM4853722v1	846	722,757,191	481	94,400	32.95
69	Bermuda beardfish (OG660 hap2 2025)	Polymixia cf. hollisterae	GCA_048537235.1_ASM4853723v1	461	707,857,291	508	100,200	32.19
70	bicolor damselfish	Stegastes partitus	GCF_000690725.1_Stegastes_partitus-1.0.2	5,817	800,485,922	44,409	50,762,588	23.44
71	bight redfish (2022)	Centroberyx gerrardi	GCF_026898505.1_AGI_CSIRO_Cger_v1	8,310	735,610,683	0	0	29.23
72	bight redfish (hap1 2025)	Centroberyx gerrardi	GCA_048128805.1_fCenGer3.hap1.cur.20231027	279	779,177,424	699	139,800	31.86
73	bight redfish (hap1 2025)	Centroberyx gerrardi	GCF_048128805.1_fCenGer3.hap1.cur.20231027	279	779,177,424	699	139,800	46.11
74	bight redfish (hap2 2025)	Centroberyx gerrardi	GCA_048129085.1_fCenGer3.hap2.cur.20231027	204	774,057,239	680	136,000	32.03
75	black goby (alternate hap 2023)	Gobius niger	GCA_951799965.1_fGobNig1.1_alternate_haplotype	3,523	838,316,121	0	0	45.69
76	black goby (primary hap 2023)	Gobius niger	GCA_951799975.1_fGobNig1.1	298	870,572,126	636	127,200	40.54
77	black goby (primary hap 2023)	Gobius niger	GCF_951799975.1_fGobNig1.1	298	870,572,126	636	127,200	48.53
78	black perch (LCO1_2020_lvr alternate hap 2022)	Embiotoca jacksoni	GCA_022578405.1_fEmbJac1.0.a	62,783	1,686,865,087	639	63,900	26.96
79	black perch (LCO1_2020_lvr primary hap 2022 refseq)	Embiotoca jacksoni	GCF_022577435.1_fEmbJac1.0.p	229	634,668,633	234	23,401	28.99
80	black porgy (SG-2024 2024)	Acanthopagrus schlegelii	GCA_041753875.1_ASM4175387v1	24	714,975,658	0	0	24.10
81	black rockcod	Notothenia coriiceps	GCF_000735185.1_NC01	38,657	636,613,682	59,164	13,288,261	29.51
82	black seabass (Rhode Island RG_2023a 2023)	Centropristis striata	GCF_030273125.1_C.striata_1.0	92	926,021,963	341	33,027	38.92
83	black seabream (2025)	Spondyliosoma cantharus	GCA_965243705.1_fSpoCan1.1	59	794,918,341	99	10,100	35.70
84	black-face blenny T.delaisi (2025)	Tripterygion delaisi	GCA_965643125.1_fTriDel1.1	40	772,807,839	8	800	32.12
85	blackbelly eelpout (fLycPai1 haplotype 1 2023)	Lycodopsis pacificus	GCA_028021495.1_fLycPai1.hap1	461	661,271,547	373	74,600	30.40
86	blackbelly eelpout (fLycPai1 haplotype 2 2023)	Lycodopsis pacificus	GCA_028022725.1_fLycPai1.hap2	109	646,369,862	366	73,200	29.94
87	blackear wrasse (2025)	Halichoeres poeyi	GCA_965645315.1_fHalPoe1.1	30	785,400,893	12	1,300	32.88
88	blackfin cardinalfish (2025)	Astrapogon puncticulatus	GCA_977014485.1_fAstPun1.1	36	770,648,391	205	25,700	30.84
89	blackspot tuskfish (SL-2024 2025)	Choerodon schoenleinii	GCA_047301625.1_ASM4730162v1	43	865,958,939	11	1,100	30.05
90	blackstripe livebearer (line A6 2022)	Poeciliopsis prolifica	GCF_027474105.1_Auburn_PproV2	415	674,152,735	89	44,933	28.58
91	blacktail shiner (hap1 2024)	Cyprinella venusta	GCA_038021265.1_fCypVen1.hap1	673	918,162,819	709	131,200	46.85
92	blacktail shiner (hap2 2024)	Cyprinella venusta	GCA_038024135.1_fCypVen1.hap2	413	928,717,837	720	134,500	47.57
93	blue catfish (D&B 2022)	Ictalurus furcatus	GCF_023375685.1_Billie_1.0	43	825,475,682	171	16,147,546	44.46
94	blue tang surgeonfish (2025)	Acanthurus coeruleus	GCA_977062895.1_fAcaCoe1.1	37	660,715,304	6	1,000	32.17
95	blue tilapia (BGI-SZ)	Oreochromis aureus	GCF_005870065.1_ASM587006v1	12,952	918,953,803	53,539	93,301,056	23.12
96	blue tilapia (Guangdong)	Oreochromis aureus	GCF_013358895.1_ZZ_aureus	304	1,005,575,223	723	285,885	32.10
97	blue whiting (alternate hap 2024)	Micromesistius poutassou	GCA_964030755.1_fMicPou1.1_alternate_haplotype	9,837	982,817,647	3,916	783,200	37.87
98	blue whiting (primary hap 2024)	Micromesistius poutassou	GCA_964030765.1_fMicPou1.1	3,832	520,636,573	3,055	611,000	35.17
99	blue whiting (primary hap 2024)	Micromesistius poutassou	GCF_964030765.1_fMicPou1.1	3,831	520,620,001	3,055	611,000	35.18
100	bluehead (hap1 2025)	Thalassoma bifasciatum	GCA_054084025.1_fThaBif1.hap1	52	785,161,433	111	22,200	35.79
101	bluehead (hap2 2025)	Thalassoma bifasciatum	GCA_054084055.1_fThaBif1.hap2	60	774,616,897	85	17,000	34.96
102	bluestreak cleaner wrasse (JK-2023 2023)	Labroides dimidiatus	GCA_030710495.1_ASM3071049v1	57	726,375,676	211	20,176	30.23
103	bluestripe pipefish (RoL2022-K1 2023)	Doryrhamphus excisus	GCF_030265055.1_RoL_Dexc_1.0	57	519,378,276	12	240	41.17
104	blunt-snouted clingfish (alternate hap)	Gouania willdenowi	GCA_900650505.1_fGouWil2.1_alternate_haplotype	7,674	759,272,921	1	31	42.46
105	blunt-snouted clingfish (primary hap 2020)	Gouania willdenowi	GCF_900634775.2_fGouWil2.2	441	937,150,793	1,160	14,353,515	53.43
106	blunt-snouted clingfish (v2 2020 genbank)	Gouania willdenowi	GCA_900634775.2_fGouWil2.2	442	937,169,869	1,160	14,353,515	42.93
107	Boeseman's rainbowfish (fMelBoe1 alternate hap 2021)	Melanotaenia boesemani	GCA_017639755.1_fMelBoe1.alt	3,194	764,404,102	45	60,336	28.42
108	Boeseman's rainbowfish (primary hap 2021)	Melanotaenia boesemani	GCA_017639745.1_fMelBoe1.pri	93	865,592,505	440	3,217,901	40.02
109	Boeseman's rainbowfish (primary hap 2021)	Melanotaenia boesemani	GCF_017639745.1_fMelBoe1.pri	93	865,592,457	440	3,217,901	29.18
110	Bolin's lanternfish (primary hap 2024)	Protomyctophum bolini	GCA_963924005.1_fProBol1.1	951	1,148,224,649	1,785	357,000	47.04
111	bonti-bonti (fTelBon1 alternate hap 2022)	Telmatherina bonti	GCA_933228925.1_fTelBon1.1_alternate_haplotype	4,619	781,234,592	0	0	38.85
112	bonti-bonti (primary hap 2022)	Telmatherina bonti	GCA_933228915.1_fTelBon1.1	146	986,039,709	1,329	265,800	40.16
113	Borax Lake chub (OS27281-9 2025)	Siphateles boraxobius	GCF_051911475.1_OSU_SipBor_1	532	1,238,650,365	0	0	66.74
114	bowfin (hap1 2024 refseq)	Amia calva	GCF_036373705.1_fAmiCal2.hap1	389	989,103,751	97	19,400	37.74
115	bowfin (hap2 2024)	Amia calva	GCA_036365475.1_fAmiCal2.hap2	297	958,875,937	80	16,000	36.24
116	Brauer's lanternfish (alternate hap 2023)	Gymnoscopelus braueri	GCA_963281105.1_fGymBra2.1_alternate_haplotype	10,794	1,279,160,753	5	1,000	46.07
117	Brauer's lanternfish (primary hap 2023)	Gymnoscopelus braueri	GCA_963280865.1_fGymBra2.1	676	1,367,984,568	2,704	540,800	49.78
118	Brauer's lanternfish (primary hap 2023)	Gymnoscopelus braueri	GCF_963280865.1_fGymBra2.1	676	1,367,984,568	2,704	540,800	59.33
119	broad-nosed pipefish (SK-2024d hap1 2025)	Syngnathus typhle	GCA_048301445.1_SynTyp1_v1.hap1	152	368,300,239	78	7,800	36.58
120	broad-nosed pipefish (SK-2024d hap2 2025)	Syngnathus typhle	GCA_048301605.1_SynTyp1_v1.hap2	125	356,339,685	90	9,000	34.73
121	broad-nosed pipefish (Sweden RoL2023-S1 2023)	Syngnathus typhle	GCF_033458585.1_RoL_Styp_1.0	495	435,284,570	40	800	43.83
122	brook trout (EN_2023a 2023)	Salvelinus fontinalis	GCF_029448725.1_ASM2944872v1	2,721	2,496,185,110	4,299	4,308,856	57.12
123	brown-marbled grouper (2020)	Epinephelus fuscoguttatus	GCF_011397635.1_E.fuscoguttatus.final_Chr_v1	26	1,047,012,452	205	20,500	31.35
124	Burton's mouthbrooder (Broad 2011)	Haplochromis burtoni	GCF_000239415.1_AstBur1.0	7,994	831,398,301	61,073	132,461,904	20.26
125	Burton's mouthbrooder (NCSU 2021)	Haplochromis burtoni	GCF_018398535.1_NCSU_Asbu1	7,421	854,588,855	32,418	93,726,465	23.62
126	butterfish (fScaArg1 alternate hap 2021)	Scatophagus argus	GCA_020382915.1_fScaArg1.alt	1,592	563,244,951	4	52	21.38
127	butterfish (primary hap 2021)	Scatophagus argus	GCF_020382885.2_fScaArg1.pri	48	570,802,272	77	1,711,559	21.27
128	butterfly blenny (alternate hap 2023)	Blennius ocellaris	GCA_963422475.1_fBleOce1.1_alternate_haplotype	5,820	675,648,630	0	0	30.34
129	butterfly blenny (primary hap 2023)	Blennius ocellaris	GCA_963422515.1_fBleOce1.1	525	728,745,255	1,625	325,000	32.58
130	butterfly blenny (primary hap 2023)	Blennius ocellaris	GCF_963422515.1_fBleOce1.1	525	728,745,255	1,625	325,000	32.58
131	California grunion (hap1 2024)	Leuresthes tenuis	GCF_036924035.1_fLeuTen1.0.hap1	296	917,115,632	223	22,300	39.82
132	California sheephead (SPU_LCO1_2020_fin alternate hap 2022)	Semicossyphus pulcher	GCA_022749735.1_fSemPul1.0.a	13,198	1,095,728,264	2,679	267,900	32.04
133	California sheephead (SPU_LCO1_2020_fin primary hap 2022)	Semicossyphus pulcher	GCA_022749685.1_fSemPul1.0.p	179	794,122,974	8	807	31.94
134	California sheephead S.pulcher (SPU_LCO1_2020_fin primary hap 2022)	Semicossyphus pulcher	GCF_022749685.1_fSemPul1.0.p	178	794,106,426	8	807	31.94
135	cardinalfish (2024)	Apogon imberbis	GCA_964211915.2_fApoImb1.1	33	819,133,141	5	800	32.48
136	channel bull blenny (2019 refseq)	Cottoperca gobio	GCF_900634415.1_fCotGob3.1	322	609,391,784	445	2,553,975	28.72
137	channel bull blenny (alternate hap 2019)	Cottoperca gobio	GCA_900634435.1_fCotGob3.1_alternate_haplotype	11,555	671,265,480	10	925	26.88
138	channel catfish (USDA103 2022)	Ictalurus punctatus	GCA_001660625.3_Coco_2.0	136	842,926,452	100	5,510,128	46.77
139	channel catfish (USDA103 v2.0 2022)	Ictalurus punctatus	GCF_001660625.3_Coco_2.0	137	842,942,949	100	5,510,128	46.73
140	cherry salmon (Uvic2021 2024)	Oncorhynchus masou masou	GCF_036934945.1_UVic_Omas_1.1	17,263	2,664,802,492	4,047	1,594,659	55.66
141	chevron butterflyfish (hap1 2024 refseq)	Chaetodon trifascialis	GCF_039877785.1_fChaTrf1.hap1	36	662,489,023	49	9,600	24.65
142	chevron butterflyfish (hap2 2024)	Chaetodon trifascialis	GCA_039877575.1_fChaTrf1.hap2	71	664,933,391	43	8,500	24.11
143	chichlid (S. diagramma)	Simochromis diagramma	GCF_900408965.1_fSimDia1.1	823	848,827,444	942	39,011	29.00
144	Chinaman-leatherjacket (Tasmania G7.1 2024)	Nelusetta ayraudi	GCF_046127955.1_CSIRO-AGI_Nayr_v1	396	576,472,122	0	0	37.76
145	chinamanfish (OG11 2025)	Symphorus nematophorus	GCA_048128715.1_fSymNem1.1_haplotype_2	60	1,079,709,985	72	13,200	33.07
146	chinamanfish (OG11 2025)	Symphorus nematophorus	GCA_048128725.1_fSymNem1.1_haplotype_1	86	1,079,363,760	70	13,300	32.88
147	Chinese cavefish (2022)	Triplophysa rosa	GCF_024868665.1_Trosa_1v2	1,039	684,821,613	9,510	9,903,649	43.83
148	Chinese large-mouth catfish (SWU-2019-XX 2020)	Silurus meridionalis	GCF_014805685.1_ASM1480568v1	286	742,596,447	597	1,345,608	37.56
149	Chinese longsnout catfish (HL-2024 2024)	Leiocassis longirostris	GCA_041146805.1_ASM4114680v1	174	695,900,828	425	23,768	36.97
150	Chinese rare minnow G.rarus (2020-XYJJ_v1 2022)	Gobiocypris rarus	GCA_023029165.1_ASM2302916v1	46	1,134,099,513	410	234,841	60.67
151	Chinese sucker (Aquarium Trade MX2 2022)	Myxocyprinus asiaticus	GCF_019703515.2_UBuf_Myxa_2	353	2,340,864,798	224	112,000	59.93
152	Chinook salmon (v1 2018 female)	Oncorhynchus tshawytscha	GCF_002872995.1_Otsh_v1.0	14,028	2,425,709,133	272,151	66,933,393	47.70
153	Chinook salmon (v2 Ot180627B 2021 male rfseq)	Oncorhynchus tshawytscha	GCF_018296145.1_Otsh_v2.0	7,665	2,294,859,190	2,334	231,729	54.65
154	chub mackerel (fScoJap1 alternate hap 2022)	Scomber japonicus	GCA_027409835.1_fScoJap1.alt	2,162	783,090,595	1	39	30.75
155	chub mackerel (primary hap 2022 refseq)	Scomber japonicus	GCF_027409825.1_fScoJap1.pri	360	828,681,152	1,572	647,100	32.44
156	chum salmon (Oke142-1_Chum_Gynogen 2020)	Oncorhynchus keta	GCF_012931545.1_Oket_V1	25,265	1,853,104,330	242,238	86,386,492	46.35
157	chum salmon (PuntledgeMale-10-30-2019 2022)	Oncorhynchus keta	GCF_023373465.1_Oket_V2	14,075	2,556,477,726	3,433	341,979	55.78
158	climbing perch (alternate hap 2019)	Anabas testudineus	GCA_900650485.1_fAnaTes1.2_alternate_haplotype	2,641	539,091,056	36	2,107,526	21.00
159	climbing perch (primary hap 2021)	Anabas testudineus	GCF_900324465.3_fAnaTes1.3	51	555,658,001	266	3,606,496	21.33
160	climbing perch (v1.3 2021)	Anabas testudineus	GCA_900324465.3_fAnaTes1.3	51	555,658,509	266	3,606,496	21.33
161	clown anemonefish (DU_AmpOce 2017)	Amphiprion ocellaris	GCF_002776465.1_AmpOce1.0	6,405	880,720,895	1,406	545,178	32.00
162	clown anemonefish (Okinawa individual 3 2022)	Amphiprion ocellaris	GCF_022539595.1_ASM2253959v1	354	863,484,803	1,454	136,641	35.40
163	coho salmon (150728-3 2019)	Oncorhynchus kisutch	GCF_002021735.2_Okis_V2	4,087	2,375,911,593	5,631	469,357	54.83
164	comb jelly S.cabrilla (2025)	Serranus cabrilla	GCA_965643205.1_fSerCab1.1	220	735,069,690	3	600	33.52
165	common bream (alternate hap 2024)	Abramis brama	GCA_963993125.1_fAbrBra2.1_alternate_haplotype	7,764	1,090,103,032	3	600	56.77
166	common bream (primary hap 2024)	Abramis brama	GCA_963993115.1_fAbrBra2.1	208	1,108,218,292	685	137,000	48.57
167	common bream (primary hap 2024)	Abramis brama	GCF_963993115.1_fAbrBra2.1	207	1,108,201,685	685	137,000	57.10
168	common carp (R8XR3 2021)	Cyprinus carpio carpio	GCA_905221575.1_Cypcar_WagV4.0	674	1,460,348,793	372	37,200	41.50
169	common carp (SPL01 2021)	Cyprinus carpio	GCF_018340385.1_ASM1834038v1	6,701	1,680,134,903	26,351	7,988,566	38.58
170	common dab (alternate hap 2023)	Limanda limanda	GCA_963576525.1_fLimLim1.1_alternate_haplotype	2,962	668,994,872	0	0	34.14
171	common dab (primary hap 2023)	Limanda limanda	GCA_963576545.1_fLimLim1.1	339	717,597,899	275	55,000	39.18
172	common dab (primary hap 2023)	Limanda limanda	GCF_963576545.1_fLimLim1.1	338	717,580,706	275	55,000	35.04
173	common dace (hap1 2025)	Leuciscus leuciscus	GCF_965113295.1_fLeuLeu2.hap1.1	876	1,198,377,133	1,202	240,400	58.59
174	common dace (hap1.1 2025)	Leuciscus leuciscus	GCA_965113295.1_fLeuLeu2.hap1.1	876	1,198,377,133	1,202	240,400	42.69
175	common dace (hap2.1 2025)	Leuciscus leuciscus	GCA_965113325.1_fLeuLeu2.hap2.1	530	1,179,019,172	1,147	229,400	55.35
176	common pandora (2025)	Pagellus erythrinus	GCA_965643245.1_fPagEry1.1	94	765,667,122	19	2,100	32.22
177	common seabream (hap1.1 2025)	Pagrus pagrus	GCA_965226575.1_fPagPag1.hap1.1	576	825,699,107	536	107,200	29.37
178	common seabream (hap1.1 2025)	Pagrus pagrus	GCF_965226575.1_fPagPag1.hap1.1	575	825,682,423	536	107,200	35.95
179	common seabream (hap2.1 2025)	Pagrus pagrus	GCA_965225695.1_fPagPag1.hap2.1	249	786,794,581	535	107,000	26.85
180	common seadragon (TA_2022b 2022)	Phyllopteryx taeniolatus	GCF_024500385.1_UOR_Ptae_1.2	1,259	652,173,514	196	3,920	40.24
181	common sole (alternate hap 2023)	Solea solea	GCA_958295035.1_fSolSol10.1_alternate_haplotype	1,318	627,818,797	0	0	31.70
182	common sole (primary hap 2023 refseq)	Solea solea	GCF_958295425.1_fSolSol10.1	242	643,757,955	373	74,600	32.91
183	common whitefish (fCorLav1.hap1.1 2024)	Coregonus lavaretus	GCA_964263955.1_fCorLav1.hap1.1	11,150	2,842,862,595	5,995	1,199,000	61.61
184	common whitefish (fCorLav1.hap2.1 2024)	Coregonus lavaretus	GCA_964263835.1_fCorLav1.hap2.1	3,980	2,352,365,286	4,689	937,818	61.14
185	coney (2025)	Cephalopholis fulva	GCA_977019285.1_fCepFul1.1	44	1,000,380,871	14	1,700	44.27
186	Connemarra clingfish (2025)	Lepadogaster candolii	GCA_965278445.2_fLepCan2.1	114	1,100,949,132	143	23,700	50.34
187	convict blenny (fPhoLeu1 alternate hap 2021)	Pholidichthys leucotaenia	GCA_020510965.1_fPhoLeu1.alt	21,417	1,865,716,438	144	143,564	67.06
188	convict blenny (primary hap 2021)	Pholidichthys leucotaenia	GCA_020510985.1_fPhoLeu1.pri	512	6,032,307,556	2,580	52,780,824	48.95
189	copperband butterflyfish (fCheRos1 alternate hap 2021)	Chelmon rostratus	GCA_017976315.1_fCheRos1.alt	2,125	601,666,562	1	500	32.92
190	copperband butterflyfish (primary hap 2021)	Chelmon rostratus	GCA_017976325.1_fCheRos1.pri	29	644,208,416	60	11,380	26.00
191	copperband butterflyfish (primary hap 2021)	Chelmon rostratus	GCF_017976325.1_fCheRos1.pri	29	644,208,431	60	11,380	21.59
192	corkwing wrasse (alternate_hap 2022)	Symphodus melops	GCA_947650305.1_fSymMel2.1_alternate_haplotype	4,136	605,169,185	1	200	27.48
193	corkwing wrasse (primary hap 2022)	Symphodus melops	GCA_947650265.1_fSymMel2.1	395	636,368,453	1,379	275,800	28.78
194	Cornish sucker (2025)	Lepadogaster purpurea	GCA_965274325.2_fLepPur2.2	92	863,662,561	78	8,700	48.13
195	Corydoras catfish unclassified (C115 2021)	Corydoras sp. C115	GCA_019802505.1_Lin1PacBio.ctg.fa.r3p3_pilon_3_oneline.fasta	2,080	699,660,186	0	0	45.33
196	crested bigscale (hap1.1 2025)	Poromitra crassiceps	GCA_964638095.1_fPorCra3.hap1.1	2,788	1,630,001,977	2,975	595,000	57.57
197	crested bigscale (hap2.1 2025)	Poromitra crassiceps	GCA_964638665.1_fPorCra3.hap2.1	1,407	1,511,638,839	2,894	578,800	56.40
198	crested weedfish (hap1 OG76 2025)	Cristiceps australis	GCA_049082185.1_fCriAus1.1_haplotype_1	793	619,674,967	1,180	234,700	29.97
199	crested weedfish (hap2 OG76 2025)	Cristiceps australis	GCA_049082045.1_fCriAus1.1_haplotype_2	513	559,096,705	1,089	215,900	29.02
200	crucian carp (alternate hap 2023)	Carassius carassius	GCA_963082795.1_fCarCar2.1_alternate_haplotype	3,713	209,623,727	0	0	46.45
201	crucian carp (primary hap 2023 refseq)	Carassius carassius	GCF_963082965.1_fCarCar2.1	277	1,684,296,438	832	166,400	45.86
202	cuckoo wrasse (alternate hap 2023)	Labrus mixtus	GCA_963583885.1_fLabMix1.1_alternate_haplotype	2,462	700,699,022	0	0	30.60
203	cuckoo wrasse (primary hap 2023)	Labrus mixtus	GCA_963584025.1_fLabMix1.1	325	740,579,663	570	114,014	33.86
204	cuckoo wrasse (primary hap 2023)	Labrus mixtus	GCF_963584025.1_fLabMix1.1	324	740,563,171	570	114,014	33.86
205	cunner (fTauAds1 alternate hap 2021)	Tautogolabrus adspersus	GCA_020745675.1_fTauAds1.alt.cur	1,476	695,716,069	31	74,261	30.23
206	cunner (primary hap 2021)	Tautogolabrus adspersus	GCA_020745685.1_fTauAds1.pri.cur	64	723,582,185	283	4,256,220	30.38
207	Dalai köbertrulling (WHDGS20190420 2020)	Triplophysa dalaica	GCF_015846415.1_ASM1584641v1	51	607,940,176	116	11,600	40.25
208	Danionella translucida (Bolton 2019)	Danionella cerebrum	GCA_007224835.1_ASM722483v1	27,639	735,303,417	8,366	9,600,144	35.07
209	Danionella translucida (fDanTra1 2020)	Danionella cerebrum	GCA_903798025.1_fDanTra1.1	11,344	657,340,729	18,487	38,677,057	28.85
210	dark-edged splitfin (DD_20200921_A 2022 refseq)	Girardinichthys multiradiatus	GCF_021462225.1_DD_fGirMul_XY1	72	1,150,004,004	409	6,172,100	38.37
211	delta smelt	Hypomesus transpacificus	GCF_021917145.1_fHypTra1	376	437,273,953	1,474	354,099	32.53
212	denticle herring (alternate hap 2019)	Denticeps clupeoides	GCA_900700345.2_fDenClu1.1_alternate_haplotype	1,972	457,704,509	4	226	27.74
213	denticle herring (primary hap 2020)	Denticeps clupeoides	GCF_900700375.2_fDenClu1.2	460	567,401,054	464	4,648,387	29.70
214	denticle herring (v2 2020)	Denticeps clupeoides	GCA_900700375.2_fDenClu1.2	461	567,417,970	464	4,648,387	28.83
215	doctor fish G.rufa (2025)	Garra rufa	GCF_049309525.1_GarRuf1.0	1,000	1,391,285,389	14,924	7,496,371	52.96
216	dorado (hap1 2023)	Salminus brasiliensis	GCA_030448965.1_fSalBra1.hap1	182	1,078,246,036	641	20,261,167	36.11
217	dorado (hap2 2023 refseq)	Salminus brasiliensis	GCF_030463535.1_fSalBra1.hap2	103	1,066,483,687	726	9,072,217	36.78
218	double-spotted pufferfish T.bimaculatus (TB-2018 2019)	Takifugu bimaculatus	GCA_004026145.2_XU_Tbim_1.0	1,158	404,311,738	1,033	104,200	22.77
219	dwarf seahorse (Florida 2022)	Hippocampus zosterae	GCF_025434085.1_ASM2543408v3	213	544,521,268	79	1,580	41.86
220	eastern happy (2025)	Astatotilapia calliptera	GCA_900246225.6_fAstCal1.5	144	877,738,871	530	1,191,738	37.24
221	eastern happy (alternate hap 2024)	Astatotilapia calliptera	GCA_964374285.1_fAstCal68.1_alternate_haplotype	1,718	845,253,161	1	100	38.28
222	eastern happy (primary hap 2024)	Astatotilapia calliptera	GCA_964374335.1_fAstCal68.1	31	933,429,770	40	4,500	32.72
223	Eastern happy (primary hap 2024)	Astatotilapia calliptera	GCF_964374335.1_fAstCal68.1	30	933,413,188	40	4,500	38.89
224	eastern happy (v3 2021)	Astatotilapia calliptera	GCA_900246225.5_fAstCal1.3	249	880,445,568	490	1,186,663	35.92
225	Eckström's topknot Z.regius (2025)	Zeugopterus regius	GCA_965642325.1_fZeuReg1.1	76	476,591,588	22	2,600	26.52
226	electric eel (alternate hap 2020)	Electrophorus electricus	GCA_013347915.1_fEleEle1.alt	2,629	428,136,346	0	0	24.43
227	electric eel (MRS-EE1 2018 U Wisconsin)	Electrophorus electricus	GCF_003665695.1_Ee_SOAP_WITH_SSPACE	8,786	551,880,868	119,361	17,042,720	21.59
228	electric eel (primary hap 2020 refseq)	Electrophorus electricus	GCF_013358815.1_fEleEle1.pri	89	589,358,956	227	10,599,768	24.89
229	electric eel (QZ-2024a 2024)	Electrophorus electricus	GCA_041902795.1_ASM4190279v1	460	833,427,914	49	2,104,217	42.36
230	electric eel (QZ-2024a 2024)	Electrophorus electricus	GCF_041902795.1_ASM4190279v1	460	833,427,914	49	2,104,217	42.36
231	elephant fish B.brachyistius (T26 2022)	Brienomyrus brachyistius	GCF_023856365.1_BBRACH_0.4	1,425	988,088,817	234	112,552	35.02
232	emerald rockcod	Trematomus bernacchii	GCF_902827165.1_fTreBer1.1	864	867,125,071	932	117,692	40.13
233	Eurasian minnow (alternate hap 2023)	Phoxinus phoxinus	GCA_949152275.1_fPhoPho1.1_alternate_haplotype	4,941	925,610,136	8	1,600	44.35
234	Eurasian minnow (primary hap 2023)	Phoxinus phoxinus	GCA_949152265.1_fPhoPho1.1	125	950,498,056	881	176,200	44.44
235	Eurasian minnow (primary hap 2023)	Phoxinus phoxinus	GCF_949152265.1_fPhoPho1.1	124	950,479,694	881	176,200	51.89
236	European anchovy (BLACKSEA-1 2023)	Engraulis encrasicolus	GCF_034702125.1_IST_EnEncr_1.0	1,922	1,435,200,347	9,202	222,396	50.58
237	European chub (alternate hap 2023)	Squalius cephalus	GCA_949319155.1_fSquCep2.1_alternate_haplotype	7,425	979,250,430	12	2,400	48.14
238	European chub (primary hap 2023)	Squalius cephalus	GCA_949319135.1_fSquCep2.1	106	1,101,930,522	588	117,600	49.02
239	European conger (primary hap 2023 refseq)	Conger conger	GCF_963514075.1_fConCon1.1	380	1,136,402,888	1,009	201,800	35.55
240	European flounder (alternate hap 2023)	Platichthys flesus	GCA_949316195.1_fPlaFle2.1_alternate_haplotype	1,915	587,918,088	0	0	26.42
241	European flounder (primary hap 2023 genbank)	Platichthys flesus	GCA_949316205.1_fPlaFle2.1	109	597,138,466	482	96,400	27.15
242	European flounder (primary hap 2023 refseq)	Platichthys flesus	GCF_949316205.1_fPlaFle2.1	108	597,120,941	482	96,400	27.16
243	European perch	Perca fluviatilis	GCF_010015445.1_GENO_Pfluv_1.0	303	951,345,774	801	292,795	37.11
244	European plaice (alternate hap 2022)	Pleuronectes platessa	GCA_947347695.1_fPlePla1.1_alternate_haplotype	3,219	613,421,917	3	600	28.01
245	European plaice (primary hap 2022 refseq)	Pleuronectes platessa	GCF_947347685.1_fPlePla1.1	355	687,388,084	1,072	214,400	33.59
246	European sardine (alternate hap 2023)	Sardina pilchardus	GCA_963854175.1_fSarPil1.1_alternate_haplotype	4,089	935,120,696	3,349	669,625	37.79
247	European seabass (2021)	Dicentrarchus labrax	GCF_905237075.1_dlabrax2021	303	695,910,406	272	1,022,065	26.22
248	European seabass (2025)	Dicentrarchus labrax	GCA_977040325.1_fDicLab2.1	59	699,158,478	10	1,200	26.75
249	European smelt (alternate hap 2023)	Osmerus eperlanus	GCA_963692645.1_fOsmEpe2.1_alternate_haplotype	5,995	420,609,216	3	600	33.72
250	European smelt (primary hap 2023 genbank)	Osmerus eperlanus	GCA_963692335.1_fOsmEpe2.1	1,008	508,737,883	2,462	492,400	35.91
251	European smelt (primary hap 2023 refseq)	Osmerus eperlanus	GCF_963692335.1_fOsmEpe2.1	1,007	508,721,272	2,462	492,400	35.92
252	European sprat (alternate hap 2023)	Sprattus sprattus	GCA_963457685.1_fSprSpr1.1_alternate_haplotype	4,969	803,136,922	2	400	38.74
253	European sprat (primary hap 2023)	Sprattus sprattus	GCA_963457725.1_fSprSpr1.1	387	840,332,306	1,501	300,226	35.52
254	fathead minnow	Pimephales promelas	GCF_016745375.1_EPA_FHM_2.0	911	1,066,429,022	5,594	141,038,611	35.72
255	flathead mullet	Mugil cephalus	GCF_022458985.1_CIBA_Mcephalus_1.1	24	634,849,760	445	222,500	24.79
256	flavescent peacock cichlid (primary hap 2025)	Aulonocara stuartgranti	GCA_965226115.1_fAulStu2.1	23	945,383,024	31	4,300	33.28
257	flavescent peacock cichlid (primary hap 2025)	Aulonocara stuartgranti	GCF_965226115.1_fAulStu2.1	22	945,366,440	31	4,300	43.09
258	flier cichlid (alternate hap MPI-CPG 2019)	Archocentrus centrarchus	GCA_007364235.1_fArcCen1_v1.h	9,292	1,034,011,644	13	209,959	30.50
259	flier cichlid (MPI-CPG 2019 refseq)	Archocentrus centrarchus	GCF_007364275.1_fArcCen1	188	932,930,362	744	16,903,477	30.69
260	French grunt (2025)	Haemulon flavolineatum	GCA_977076405.1_fHaeFla1.1	56	709,698,976	11	1,400	38.32
261	freshwater garfish (fXenCan1 alternate hap 2020)	Xenentodon cancila	GCA_014839645.1_fXenCan1.alt	5,169	658,557,970	2	1,000	26.36
262	freshwater garfish (primary hap 2020)	Xenentodon cancila	GCA_014839995.1_fXenCan1.pri	410	736,214,936	1,373	7,503,584	27.54
263	fringed filefish (2025)	Monacanthus ciliatus	GCA_977018155.1_fMonCil1.1	146	476,314,676	426	46,200	29.83
264	giant goby (2025)	Gobius cobitis	GCA_977064505.1_fGobCob1.1	228	859,832,672	131	16,300	41.23
265	giant grouper (andai-2023 2024)	Epinephelus lanceolatus	GCA_041903045.1_ASM4190304v1	176	1,089,387,278	7	3,500	33.30
266	giant grouper (andai-2023 2024)	Epinephelus lanceolatus	GCF_041903045.1_ASM4190304v1	177	1,089,403,852	7	3,500	45.98
267	giant grouper (Andai001 2019)	Epinephelus lanceolatus	GCF_005281545.1_ASM528154v1	4,201	1,087,415,941	23,415	39,254,828	30.31
268	giant-fin mudskipper (primary hap 2023)	Periophthalmus magnuspinnatus	GCA_009829125.3_fPerMag1.2.pri	123	752,622,057	701	7,178,761	43.08
269	gilthead seabream (alternate hap 2019)	Sparus aurata	GCA_900880695.1_fSpaAur1.1_alternate_haplotype	7,239	668,417,842	2	532	24.38
270	gilthead seabream (v2 2021)	Sparus aurata	GCA_900880675.2_fSpaAur1.2	176	833,595,063	1,050	342,268	29.60
271	girdled pipefish (MCC-2025b 2025)	Festucalex cinctus	GCF_051991245.1_RoL_Fcin_1.0	463	695,194,371	101	2,020	49.43
272	glasseye (2025)	Heteropriacanthus cruentatus	GCA_977009785.1_fHetCru1.1	66	681,333,371	59	7,100	36.08
273	glassy sweeper (hap1 2025)	Pempheris schomburgkii	GCA_054100275.1_fPemSco2.hap1	539	746,095,966	322	64,400	41.50
274	glassy sweeper (hap2 2025)	Pempheris schomburgkii	GCA_054100245.1_fPemSco2.hap2	485	730,627,138	275	55,000	40.53
275	golden-line barbel	Sinocyclocheilus grahami	GCF_001515645.1_SAMN03320097.WGS_v1.1	31,277	1,750,287,761	136,894	182,848,609	37.17
276	goldfish	Carassius auratus	GCF_003368295.1_ASM336829v1	6,216	1,820,635,050	2,247	224,700	40.21
277	goldsinny wrasse (2025)	Ctenolabrus rupestris	GCA_965358205.2_fCteRup1.2	147	767,190,745	528	58,800	37.77
278	grass carp (HZGC_01 2021)	Ctenopharyngodon idella	GCF_019924925.1_HZGC01	31	893,215,104	150	150,000	40.24
279	great blue-spotted mudskipper (Guang Dong 2022)	Boleophthalmus pectinirostris	GCF_026225935.1_ASM2622593v1	600	941,505,238	3,407	3,486,618	54.69
280	great blue-spotted mudskipper (pooled male+femail 2014 BGI)	Boleophthalmus pectinirostris	GCF_000788275.1_BP.fa	16,620	955,752,150	92,327	65,847,082	42.56
281	greater amberjack	Seriola dumerili	GCF_002260705.1_Sdu_1.0	34,656	677,686,174	9,742	5,561,840	24.75
282	greater argentine (alternate hap 2023)	Argentina silus	GCA_951799415.1_fArgSil1.1_alternate_haplotype	4,805	550,403,860	0	0	35.98
283	greater argentine (primary hap 2023)	Argentina silus	GCA_951799395.1_fArgSil1.1	1,024	670,765,936	1,752	350,400	39.30
284	greater argentine (primary hap 2023)	Argentina silus	GCF_951799395.1_fArgSil1.1	1,024	670,765,936	1,752	350,400	41.97
285	greater pipefish (primary hap 2020)	Syngnathus acus	GCA_901709675.2_fSynAcu1.2	88	324,347,687	43	13,700	25.95
286	greater pipefish (v1 alternate hap 2019)	Syngnathus acus	GCA_901709685.1_fSynAcu1.1_alternate_haplotype	1,848	234,858,432	2	600	23.32
287	greater pipefish (v1.2 2020 refseq)	Syngnathus acus	GCF_901709675.1_fSynAcu1.2	87	324,331,233	43	13,700	25.95
288	greater pipefish (v2 2023 genbank)	Syngnathus acus	GCA_948146105.1_fSynAcu2.1	251	359,216,277	95	19,000	34.10
289	greater pipefish (v2 alternate haplotype 2023)	Syngnathus acus	GCA_948146095.1_fSynAcu2.1_alternate_haplotype	4,533	334,243,819	0	0	29.10
290	greater sand-eel (alternate hap 2023)	Hyperoplus immaculatus	GCA_949358355.1_fHypImm3.1_alternate_haplotype	4,952	763,769,615	0	0	38.84
291	greater sand-eel (primary hap 2023)	Hyperoplus immaculatus	GCA_949357725.1_fHypImm3.1	1,568	797,804,280	1,188	237,600	40.07
292	green swordtail	Xiphophorus hellerii	GCF_003331165.1_Xiphophorus_hellerii-4.1	87	732,906,125	661	2,127,807	28.89
293	grey gurnard (alternate hap 2023)	Eutrigla gurnardus	GCA_963514115.1_fEutGur1.1_alternate_haplotype	2,523	662,358,898	0	0	38.23
294	grey gurnard (primary hap 2023)	Eutrigla gurnardus	GCA_963514095.1_fEutGur1.1	319	680,483,561	553	110,600	35.71
295	grey gurnard (primary hap 2023)	Eutrigla gurnardus	GCF_963514095.1_fEutGur1.1	319	680,483,561	553	110,600	39.58
296	gudgeon (alternate hap 2023)	Gobio gobio	GCA_949357705.1_fGobGob1.1_alternate_haplotype	7,245	1,349,092,698	8	1,600	67.88
297	gudgeon (primary hap 2023)	Gobio gobio	GCA_949357685.1_fGobGob1.1	231	1,460,679,231	1,046	209,200	68.84
298	gudgeon (primary hap 2023)	Gobio gobio	GCF_949357685.1_fGobGob1.1	230	1,460,662,624	1,046	209,200	66.30
299	Gulf pipefish (Florida 2022)	Syngnathus scovelli	GCF_024217435.2_RoL_Ssco_1.2	495	428,400,902	11	220	43.65
300	Gulf pipefish (RoL_Ssco_1.1 Florida 2022 refseq)	Syngnathus scovelli	GCF_024217435.1_RoL_Ssco_1.1	496	428,432,749	11	220	43.65
301	Gulf pipefish (RoL_Ssco_1.2 Florida 2022 genbank)	Syngnathus scovelli	GCA_024217435.4_RoL_Ssco_1.2	496	428,417,373	11	220	43.65
302	guppy	Poecilia reticulata	GCF_000633615.1_Guppy_female_1.0_MT	2,767	731,621,225	458,354	67,451,939	25.67
303	honeycomb rockfish (fSebUmb1 alternate hap 2020)	Sebastes umbrosus	GCA_015220095.1_fSebUmb1.alt	2,131	765,970,641	21	855	37.65
304	honeycomb rockfish (primary hap 2020)	Sebastes umbrosus	GCA_015220745.1_fSebUmb1.pri	139	800,921,631	215	1,393,892	43.58
305	honeycomb rockfish (primary hap 2020)	Sebastes umbrosus	GCF_015220745.1_fSebUmb1.pri	138	800,904,020	215	1,393,892	36.28
306	hooknose (2025)	Agonus cataphractus	GCA_975247245.1_fAgoCat1.1	313	673,574,728	876	102,800	33.36
307	horned golden-line barbel	Sinocyclocheilus rhinocerous	GCF_001515625.1_SAMN03320098_v1.1	164,172	1,655,785,943	150,790	134,307,852	35.97
308	humpback grouper (ca_2020 2021)	Cromileptes altivelis	GCA_019925165.1_OUC_Cal_1.0	306	1,083,008,411	518	53,228	45.72
309	humphead wrasse	Cheilinus undulatus	GCF_018320785.1_ASM1832078v1	46	1,173,472,134	284	28,400	33.01
310	Indian glassy fish (alternate hap 2019)	Parambassis ranga	GCA_900651595.1_fParRan2.1_alternate_haplotype	2,242	486,545,135	230	2,056,711	24.11
311	Indian glassy fish (primary hap 2020)	Parambassis ranga	GCF_900634625.2_fParRan2.2	156	551,012,959	1,523	10,561,548	25.10
312	Indian glassy fish (v2 2020)	Parambassis ranga	GCA_900634625.2_fParRan2.2	157	551,029,983	1,523	10,561,548	25.10
313	Indian medaka	Oryzias melastigma	GCF_002922805.2_ASM292280v2	8,493	778,703,520	51,550	40,471,418	33.35
314	Indo-Pacific tarpon (2020)	Megalops cyprinoides	GCF_013368585.1_fMegCyp1.pri	207	959,258,046	63	283,098	22.11
315	Japanese flounder	Paralichthys olivaceus	GCF_001970005.1_Flounder_ref_guided_V1.0	9,525	643,911,827	40,314	122,165,179	17.39
316	Japanese flounder (ysfri-2021 2022)	Paralichthys olivaceus	GCF_024713975.1_ASM2471397v2	25	588,187,604	21	2,100	26.58
317	Japanese medaka	Oryzias latipes	GCF_002234675.1_ASM223467v1	25	734,057,086	491	491,000	34.95
318	jewelled blenny (alternate hap 2019)	Salarias fasciatus	GCA_902148835.1_fSalaFa1.1_alternate_haplotype	4,516	894,675,777	9	3,272,521	28.60
319	jewelled blenny (primary hap 2019 genbank)	Salarias fasciatus	GCA_902148845.1_fSalaFa1.1	202	797,490,645	602	10,447,897	26.62
320	jewelled blenny (primary hap 2019 refseq)	Salarias fasciatus	GCF_902148845.1_fSalaFa1.1	203	797,507,141	602	10,447,897	26.61
321	John dory (alternate hap 2023)	Zeus faber	GCA_960530785.1_fZeuFab8.1_alternate_haplotype	5,370	809,816,570	0	0	40.06
322	John dory (primary hap 2023)	Zeus faber	GCA_960531495.1_fZeuFab8.1	191	804,731,948	887	177,400	39.97
323	kelp grouper (mb 2019)	Epinephelus moara	GCF_006386435.1_YSFRI_EMoa_1.0	4,563	1,030,477,684	48,394	30,797,138	29.13
324	kelp perch (BFR_SWC_R1_liver_20210118 2023)	Brachyistius frenatus	GCF_029030835.1_ASM2903083v1	1,003	595,935,260	0	0	26.91
325	Korean giant-fin mudskipper (v1 alternate hap 2020 genbank)	Periophthalmus magnuspinnatus	GCA_009829135.1_fPerMag1.alt	2,799	698,977,026	1	500	39.04
326	Korean giant-fin mudskipper (v1.2 primary hap 2023)	Periophthalmus magnuspinnatus	GCF_009829125.3_fPerMag1.2.pri	122	752,605,561	701	7,178,761	43.07
327	lake trout	Salvelinus namaycush	GCF_016432855.1_SaNama_1.0	4,121	2,345,513,378	3,264	326,400	54.51
328	lake whitefish (EN20210322 male 2021 Laval U)	Coregonus clupeaformis	GCF_018398675.1_ASM1839867v1	6,355	2,682,612,311	1,716	74,680	61.22
329	lake whitefish (EN_2021a female 2021 Laval U)	Coregonus clupeaformis	GCF_020615455.1_ASM2061545v1	7,334	2,753,287,365	1,159	120,877	61.18
330	lantern fish (alternate hap 2024)	Nannobrachium achirus	GCA_963921835.1_fNanAch1.1_alternate_haplotype	9,986	1,620,255,849	108	21,600	53.45
331	lantern fish (primary hap 2024)	Nannobrachium achirus	GCA_963921795.1_fNanAch1.1	673	1,658,848,640	2,397	479,400	54.08
332	lantern fish (primary hap 2024)	Nannobrachium achirus	GCF_963921795.1_fNanAch1.1	673	1,658,848,640	2,397	479,400	54.08
333	large yellow croaker	Larimichthys crocea	GCF_000972845.2_L_crocea_2.0	9,998	657,939,657	7,424	2,166,101	24.87
334	large-eye snaggletooth (alternate hap 2023)	Borostomias antarcticus	GCA_949987545.1_fBorAnt1.1_alternate_haplotype	5,761	788,134,964	0	0	42.72
335	large-eye snaggletooth (primary hap 2023)	Borostomias antarcticus	GCA_949987555.1_fBorAnt1.1	1,378	909,249,001	2,631	526,200	46.88
336	large-eye snaggletooth (primary hap 2023)	Borostomias antarcticus	GCF_949987555.1_fBorAnt1.1	1,378	909,249,001	2,631	526,200	54.64
337	large-scale loach P.dabryanus (BB 2023)	Paramisgurnus dabryanus	GCF_030506205.1_PD_contigs_1.0	610	1,425,974,144	1	60	50.18
338	largemouth bass (2-A1 2021)	Micropterus salmoides	GCA_019677235.1_HNU_Msal_1.0	202	877,669,248	672	335,002	29.68
339	largemouth bass (LMB-PRFRI aquatic 2020)	Micropterus salmoides	GCF_014851395.1_ASM1485139v1	4,753	963,613,914	2,909	1,454,500	29.63
340	largescale foureyes (fAnaAna1 alternate hap 2020)	Anableps anableps	GCA_014839705.1_fAnaAna1.alt	5,088	445,542,990	0	0	27.42
341	largescale foureyes (primary hap 2020)	Anableps anableps	GCA_014839685.1_fAnaAna1.pri	33	867,632,993	107	306,559	29.88
342	leafy seadragon (BA_2022a 2022)	Phycodurus eques	GCF_024500275.1_UOR_Pequ_1.1	1,537	666,479,602	76	1,760	41.21
343	lemon sole (alternate hap 2024)	Microstomus kitt	GCA_964266705.1_fMicKit1.1_alternate_haplotype	7,487	928,207,996	0	0	47.15
344	lemon sole (primary hap 2024)	Microstomus kitt	GCA_964266715.1_fMicKit1.1	1,581	752,333,918	409	81,800	39.40
345	leopard coralgrouper	Plectropomus leopardus	GCF_008729295.1_YSFRI_Pleo_2.0	94,260	895,705,288	3,611	15,810,414	29.38
346	leopard coralgrouper (2020)	Plectropomus leopardus	GCA_011397275.1_Pleo_1.0	110	787,600,493	1,076	538,000	29.87
347	leopard coralgrouper (mb 2020)	Plectropomus leopardus	GCA_008729295.2_YSFRI_Pleo_2.0	94,259	895,688,574	3,611	15,810,414	29.38
348	leopard-spotted goby (2025)	Thorogobius ephippiatus	GCA_965366085.1_fThoEph1.1	1,051	1,018,347,539	186	20,700	53.08
349	lesser salmon catfish (fNeoGra1 alternate hap 2023)	Neoarius graeffei	GCA_027579805.1_fNeoGra1.alt	6,590	2,195,086,485	3	67	62.71
350	lesser salmon catfish (primary hap 2023 refseq)	Neoarius graeffei	GCF_027579695.1_fNeoGra1.pri	38	2,341,916,362	334	13,260,140	71.56
351	lesser sand eel (primary hap 2023)	Ammodytes marinus	GCF_949987685.1_fAmmMar1.1	616	777,819,083	1,017	203,400	41.75
352	lesser sand-eel (alternate hap 2023)	Ammodytes marinus	GCA_950004245.1_fAmmMar1.1_alternate_haplotype	3,619	756,335,084	1	200	38.09
353	lesser sand-eel (primary hap 2023)	Ammodytes marinus	GCA_949987685.1_fAmmMar1.1	617	777,835,610	1,017	203,400	39.22
354	lesser weever (alternate hap 2023)	Echiichthys vipera	GCA_963691805.1_fEchVip8.1_alternate_haplotype	3,240	738,382,560	2	400	32.68
355	lesser weever (primary hap 2023)	Echiichthys vipera	GCA_963691815.1_fEchVip8.1	133	800,398,249	606	121,200	33.26
356	lesser weever (primary hap 2023)	Echiichthys vipera	GCF_963691815.1_fEchVip8.1	132	800,381,326	606	121,200	33.54
357	limp eelpout (alternate hap 2023)	Melanostigma gelatinosum	GCA_949748265.1_fMelGel1.1_alternate_haplotype	2,698	629,798,166	2	400	30.28
358	limp eelpout (primary hap 2023)	Melanostigma gelatinosum	GCA_949748355.1_fMelGel1.1	534	661,975,483	589	119,200	33.26
359	limp eelpout (primary hap 2023)	Melanostigma gelatinosum	GCF_949748355.1_fMelGel1.1	534	661,975,483	589	119,200	35.69
360	live sharksucker (alternate hap 2019)	Echeneis naucrates	GCA_900963505.1_fEcheNa1.1_alternate_haplotype	1,405	528,272,450	19	224,651	22.09
361	live sharksucker (primary hap 2021)	Echeneis naucrates	GCF_900963305.2_fEcheNa1.2	37	544,212,633	140	599,356	21.82
362	live sharksucker (v2 2021)	Echeneis naucrates	GCA_900963305.2_fEcheNa1.2	38	544,229,243	140	599,356	21.82
363	longspined bullhead (.1 primary hap 2021)	Taurulus bubalis	GCA_910589615.1_fTauBub2.1	27	615,153,901	242	77,100	28.62
364	longspined bullhead (fTauBub2.1 alternate hap 2021)	Taurulus bubalis	GCA_910589325.1_fTauBub2.1_alternate_haplotype	1,778	614,755,631	0	0	28.10
365	lumpfish (alternate hap 2019)	Cyclopterus lumpus	GCA_009769515.1_fCycLum1.alt	1,866	480,967,379	0	0	28.18
366	lumpfish (primary hap v2.1 2023 genbank)	Cyclopterus lumpus	GCA_963457625.1_fCycLum2.1	232	586,296,809	954	190,814	30.29
367	lumpfish (v1 primary hap 2019 refseq)	Cyclopterus lumpus	GCF_009769545.1_fCycLum1.pri	48	572,885,595	347	10,182,204	28.09
368	lyretail cichlid	Neolamprologus brichardi	GCF_000239395.1_NeoBri1.0	9,083	847,883,811	109,100	161,986,532	19.51
369	Macquarie perch (MP_SCH12 2025)	Macquaria australasica	GCA_005408345.2_DU_Maus_v2.0	1,971	677,147,139	2,749	1,293,123	27.05
370	Malawi cichilid R.sp. 'chilingali' (alternate hap 2024)	Rhamphochromis sp. 'chilingali'	GCA_963969275.1_fRhaChi2.1_alternate_haplotype	2,406	738,725,802	0	0	39.87
371	Malawi cichlid R.sp.'chilingali' (2024)	Rhamphochromis sp. 'chilingali'	GCA_963969265.1_fRhaChi2.1	82	921,184,210	422	84,400	38.20
372	mandarin fish (A2ci 2020)	Siniperca chuatsi	GCA_011952085.1_sinChu7	1,155	755,045,244	308	1,078,130	27.27
373	mandarin fish (FFG_IHB_CAS 2021)	Siniperca chuatsi	GCF_020085105.1_ASM2008510v1	65	718,820,513	93	9,300	27.44
374	mandarin fish (RoL2022-P1 2023)	Synchiropus splendidus	GCF_027744825.2_RoL_Sspl_1.0	97	582,898,256	19	361	32.12
375	mangrove rivulus	Kryptolebias marmoratus	GCF_001649575.2_ASM164957v2	300	680,655,669	32,278	38,822,415	27.34
376	marbled rockcod (alternate hap 2023)	Notothenia rossii	GCA_949606865.1_fNotRos5.1_alternate_haplotype	8,737	1,005,523,998	0	0	45.04
377	marbled rockcod (primary hap 2023)	Notothenia rossii	GCA_949606895.1_fNotRos5.1	943	1,042,906,029	4,157	831,400	44.98
378	Mariana snailfish (Mariana Trench HS2019 2023)	Pseudoliparis swirei	GCF_029220125.1_NWPU_hadal_v1	200	626,455,521	974	874,774	37.78
379	Mediterranean sand smelt (2025)	Atherina hepsetus	GCA_977020125.1_fAthHes1.1	133	1,033,458,085	254	27,600	38.78
380	megrim (2025)	Lepidorhombus whiffiagonis	GCA_965246675.1_fLepWhi1.1	33	540,570,312	40	4,400	27.10
381	Mexican tetra (2017 WashU)	Astyanax mexicanus	GCF_000372685.2_Astyanax_mexicanus-2.0	2,415	1,335,239,194	621	43,642,769	42.58
382	Mexican tetra (ESR-SI-001 2022)	Astyanax mexicanus	GCA_023375975.1_AstMex3_surface	109	1,373,169,186	14	7,000	52.51
383	Mexican tetra (ESR-SI-001 2022)	Astyanax mexicanus	GCF_023375975.1_AstMex3_surface	109	1,373,169,186	14	7,000	47.33
384	Mexican tetra (Pach_M1 Pachon cave 2021)	Astyanax mexicanus	GCA_019721115.1_AMEX_1.1	195	1,378,811,567	334	165,606	47.76
385	Midas cichlid (2014)	Amphilophus citrinellus	GCA_000751415.1_Midas_v5	6,637	844,902,565	617,558	60,366,222	25.16
386	milkfish (2019)	Chanos chanos	GCF_902362185.1_fChaCha1.1	31	656,929,047	112	4,230,332	26.35
387	milkfish (alternate hap 2019)	Chanos chanos	GCA_902362175.1_fChaCha1.1_alternate_haplotype	1,937	637,484,823	3	700	26.50
388	milkfish (primary hap 2019)	Chanos chanos	GCA_902362185.1_fChaCha1.1	30	656,912,816	111	4,230,331	26.35
389	minispotted lanternfish (alternate hap 2023)	Gymnoscopelus microlampas	GCA_963454925.1_fGymMic1.1_alternate_haplotype	7,669	1,278,893,940	3	600	55.33
390	minispotted lanternfish (primary hap 2023)	Gymnoscopelus microlampas	GCA_963454915.1_fGymMic1.1	374	1,318,656,016	1,398	279,600	47.09
391	minispotted lanternfish (primary hap 2023)	Gymnoscopelus microlampas	GCF_963454915.1_fGymMic1.1	374	1,318,656,016	1,398	279,600	56.17
392	monkeyface prickleback (CVI_PGR_0920_01 alternate hap 2022)	Cebidichthys violaceus	GCA_023349535.1_fCebVio1.0.a	486	606,177,218	927	92,700	27.32
393	monkeyface prickleback (CVI_PGR_0920_01 primary hap 2022)	Cebidichthys violaceus	GCA_023349555.1_fCebVio1.0.p	725	575,660,146	936	93,600	27.15
394	monkeyface prickleback (CVI_PGR_0920_01 primary hap 2022)	Cebidichthys violaceus	GCF_023349555.1_fCebVio1.0.p	724	575,643,635	936	93,600	27.15
395	Montagu's blenny (2025)	Coryphoblennius galerita	GCA_965229965.1_fCorGal2.1	77	775,345,180	483	52,600	34.99
396	Monterrey platyfish	Xiphophorus couchianus	GCF_001444195.1_X_couchianus-1.0	68	688,541,509	229	1,031,462	28.28
397	mormyrid electric fish (MSU_618 2025)	Paramormyrops kingsleyae	GCF_048594095.1_PKINGS_0.4	407	933,939,706	249	24,900	29.37
398	mother-of-pearl pipefish (UIUO_Vmar 2025)	Vanacampus margaritifer	GCF_051991255.1_RoL_Vmar_1.0	213	628,116,969	67	1,340	44.26
399	mummichog (Maine)	Fundulus heteroclitus	GCF_000826765.1_Fundulus_heteroclitus-3.0.2	10,180	1,021,898,560	123,625	89,424,232	26.05
400	mummichog (U. Missouri)	Fundulus heteroclitus	GCF_011125445.2_MU-UCD_Fhet_4.1	1,031	1,203,505,739	2,820	1,407,874	33.01
401	New Zealand spotty (alternate hap 2019 genbank)	Notolabrus celidotus	GCA_009762545.1_fNotCel1.alt	3,286	770,553,912	0	0	33.61
402	New Zealand spotty (primary hap 2019 genbank)	Notolabrus celidotus	GCA_009762535.1_fNotCel1.pri	468	846,760,650	1,135	14,268,481	33.39
403	New Zealand spotty (primary hap refseq)	Notolabrus celidotus	GCF_009762535.1_fNotCel1.pri	467	846,744,125	1,135	14,268,481	33.39
404	Nile tilapia	Oreochromis niloticus	GCF_001858045.2_O_niloticus_UMD_NMBU	2,460	1,005,681,550	551	55,001	31.17
405	Nilsson's pipefish (2025)	Syngnathus rostellatus	GCA_965643225.1_fSynRos1.1	77	378,829,410	74	8,000	38.29
406	ninespine stickleback (alternate hap 2023)	Pungitius pungitius	GCA_949316245.1_fPunPun2.1_alternate_haplotype	1,934	413,337,341	0	0	27.13
407	ninespine stickleback (NSP_V7 2020)	Pungitius pungitius	GCF_902500615.1_NSP_V7	1,667	466,599,196	341	34,100	25.74
408	ninespine stickleback (primary hap 2023 genbank)	Pungitius pungitius	GCA_949316345.1_fPunPun2.1	175	480,450,674	738	147,600	28.40
409	ninespine stickleback (primary hap 2023 refseq)	Pungitius pungitius	GCF_949316345.1_fPunPun2.1	174	480,434,100	738	147,600	28.40
410	North African catfish (Netherlands MV-2021 2022)	Clarias gariepinus	GCF_024256425.1_CGAR_prim_01v2	48	969,620,777	0	0	44.81
411	North African catfish (Netherlands MV-2021 alternate hap 2022)	Clarias gariepinus	GCA_024256465.1_CGAR_Hap2	98	954,244,515	115	140,152	38.53
412	North African catfish (Netherlands MV-2021 primary hap 2022)	Clarias gariepinus	GCA_024256435.1_CGAR_Hap1	119	972,641,408	180	8,515	39.05
413	northern cavefish (hap1 2024)	Amblyopsis spelaea	GCA_046255685.1_fAmbSpe1.hap1	892	817,459,139	466	93,200	49.51
414	northern cavefish (hap2 2024)	Amblyopsis spelaea	GCA_046255725.1_fAmbSpe1.hap2	667	865,090,090	484	96,800	52.00
415	northern pike	Esox lucius	GCF_004634155.1_Eluc_v4	811	940,906,975	584	58,400	33.32
416	northern pike (alternate hap 2020)	Esox lucius	GCA_011004835.1_fEsoLuc1.alt	3,813	622,571,242	11	417,274	31.83
417	northern pike (primary hap 2020 refseq)	Esox lucius	GCF_011004845.1_fEsoLuc1.pri	53	918,748,614	112	1,022,735	32.97
418	northern snakehead (prfri 2023)	Channa argus	GCF_033026475.1_Channa_argus_male_v1.0	291	675,473,700	52	2,546	29.41
419	ocellated dragonet (captive hap1 2024)	Neosynchiropus ocellatus	GCA_044231665.1_SynOce1_v1.hap1	107	470,091,028	99	9,900	21.06
420	ocellated dragonet (captive hap2 2024)	Neosynchiropus ocellatus	GCA_044231645.1_SynOce1_v1.hap2	129	471,984,592	111	11,100	21.93
421	Old Calabar mormyrid (PKING1 2018)	Paramormyrops kingsleyae	GCF_002872115.1_PKINGS_0.1	4,666	799,417,351	49,579	63,880,082	20.88
422	old wife (hap1 2024)	Enoplosus armatus	GCA_043641665.1_fEnoArm2.hap1	135	579,881,259	114	22,500	24.58
423	old wife E.armatus (hap1 2024)	Enoplosus armatus	GCF_043641665.1_fEnoArm2.hap1	136	579,897,767	114	22,500	23.12
424	old wife E.armatus (hap2 2024)	Enoplosus armatus	GCA_043640875.1_fEnoArm2.hap2	94	578,326,983	100	19,800	22.89
425	orangethroat darter	Etheostoma spectabile	GCF_008692095.1_UIUC_Espe_1.0	3,119	854,806,606	101,221	4,031,177	31.23
426	orbiculate cardinalfish (alternate hap 2019)	Sphaeramia orbicularis	GCA_902148825.1_fSphaOr1.1_alternate_haplotype	6,896	1,135,435,641	142	630,303	45.58
427	orbiculate cardinalfish (primary hap 2019 genbank)	Sphaeramia orbicularis	GCA_902148855.1_fSphaOr1.1	340	1,342,662,642	1,844	3,566,081	48.65
428	orbiculate cardinalfish (primary hap 2019 refseq)	Sphaeramia orbicularis	GCF_902148855.1_fSphaOr1.1	340	1,342,662,642	1,844	3,566,081	48.65
429	oriental weatherfish (2024)	Misgurnus anguillicaudatus	GCF_027580225.2_ASM2758022v2	61	1,120,313,161	110	55,000	45.48
430	oriental weatherfish (BS_2022a 2023)	Misgurnus anguillicaudatus	GCF_027580225.1_HAU_Mang_1.0	358	1,104,586,043	614	61,301	45.73
431	Osbeck's grenadier anchovy (Shantou hap1 2025)	Coilia mystus	GCA_048544215.1_fCoiMys1.hap1	180	803,134,922	1,177	117,700	38.65
432	Osbeck's grenadier anchovy (Shantou hap2 2025)	Coilia mystus	GCA_048544225.1_fCoiMys1.hap2	184	854,254,650	1,132	113,200	38.31
433	oyster pompano (Australia AG129_WGS33_773 2025)	Trachinotus anak	GCF_046630095.1_CSIRO_AGI_Tana_v1	150	665,989,892	0	0	24.79
434	P.nyererei 1_Seehausen	Pundamilia nyererei	GCF_000239375.1_PunNye1.0	7,233	830,129,318	60,817	131,372,167	20.67
435	Pacific bluefin tuna (20180606_amami#17_male 2023)	Thunnus orientalis	GCA_021601225.2_Tori_3.1	580	791,677,880	269	26,444	32.22
436	Pacific cod (2023)	Gadus macrocephalus	GCF_031168955.1_ASM3116895v1	24	555,697,652	4,826	482,163	38.54
437	Pacific halibut (PH-IPHC-18 2020)	Hippoglossus stenolepis	GCF_013339905.1_IPHC_HiSten_1.0	120	594,145,200	219	21,900	25.27
438	Pacific halibut (QCI-W04-F060 2022)	Hippoglossus stenolepis	GCF_022539355.2_HSTE1.2	53	602,165,188	1,131	325,822	24.80
439	Pacific saury (AMF1-May2022 2023)	Cololabis saira	GCF_033807715.1_fColSai1.1	759	1,146,362,327	900	450,000	44.02
440	panther danio (primary hap 2020)	Danio aesculapii	GCF_903798145.1_fDanAes4.1	342	1,381,485,597	1,821	16,316,683	56.15
441	parallel lanternfish (alternate hap 2024)	Protomyctophum parallelum	GCA_964188415.1_fProPar1.1_alternate_haplotype	23	1,013,731,500	4,955	991,000	46.52
442	parallel lanternfish (primary hap 2024)	Protomyctophum parallelum	GCA_964188405.1_fProPar1.1	24	1,235,328,005	2,729	545,800	48.26
443	Patagonian blennie (Puerto Natales JMC-PN-2008 2024)	Eleginops maclovinus	GCF_036324505.1_JC_Emac_rtc_rv5	27	606,306,633	380	190,000	25.60
444	pejerrey (fOdoBon6 haplotype 2 2023)	Odontesthes bonariensis	GCA_027942885.1_fOdoBon6.hap2	334	974,945,057	135	67,500	36.86
445	pejerrey (hap1 2023 genbank)	Odontesthes bonariensis	GCA_027942865.1_fOdoBon6.hap1	189	945,823,896	282	91,800	35.17
446	pejerrey (hap1 2023 refseq)	Odontesthes bonariensis	GCF_027942865.1_fOdoBon6.hap1	189	945,823,896	282	91,800	35.17
447	peladilla (fAplTae1 alternate hap 2021)	Aplochiton taeniatus	GCA_017639685.1_fAplTae1.alt	5,690	560,414,924	11	839	28.85
448	peladilla (primary hap 2021)	Aplochiton taeniatus	GCA_017639675.1_fAplTae1.pri	41	461,946,147	1,158	8,155,958	27.72
449	pencil smelt (primary hap 2024)	Nansenia antarctica	GCF_963989245.1_fNanAnt1.1	1,177	1,085,794,659	3,299	659,800	48.79
450	pencil smelt N.antarctica (alternate hap 2024)	Nansenia antarctica	GCA_963989255.1_fNanAnt1.1_alternate_haplotype	8,937	1,005,279,045	35	7,000	47.24
451	pencil smelt N.antarctica (primary hap 2024)	Nansenia antarctica	GCA_963989245.1_fNanAnt1.1	1,177	1,085,794,659	3,299	659,800	48.79
452	picturesque dragonet (SynPic1 hap1 2024)	Synchiropus picturatus	GCA_044231685.1_ASM4423168v1	355	500,467,214	122	12,200	25.26
453	picturesque dragonet (SynPic1 hap2 2024)	Synchiropus picturatus	GCA_044231675.1_ASM4423167v1	300	492,062,741	100	10,000	24.57
454	pike-perch	Sander lucioperca	GCF_008315115.2_SLUC_FBN_1.2	337	901,238,333	711	194,059	36.52
455	pinecone soldierfish (alternate hap 2019)	Myripristis murdjan	GCA_902148815.1_fMyrMur1.1_alternate_haplotype	2,193	819,084,930	6	688	27.94
456	pinecone soldierfish (primary hap 2019 genbank)	Myripristis murdjan	GCA_902150065.1_fMyrMur1.1	87	835,254,674	253	1,865,832	28.16
457	pinecone soldierfish (primary hap 2019 refseq)	Myripristis murdjan	GCF_902150065.1_fMyrMur1.1	87	835,254,674	253	1,865,832	28.16
458	pink cusk-eel (Tasmania CSIRO-AG114 2024)	Genypterus blacodes	GCF_046128005.1_CSIRO-AGI_Gbla_v1	598	463,765,610	0	0	26.53
459	pink salmon	Oncorhynchus gorbuscha	GCF_021184085.1_OgorEven_v1.0	19,028	2,690,283,663	5,213	1,188,012	57.36
460	ploughfish	Gymnodraco acuticeps	GCF_902827175.1_fGymAcu1.1	2,618	996,888,495	1,569	192,604	45.12
461	pollack (alternate hap 2023)	Pollachius pollachius	GCA_949987605.1_fPolPol2.1_alternate_haplotype	4,970	591,893,695	0	0	33.27
462	pollack (primary hap 2023)	Pollachius pollachius	GCA_949987615.1_fPolPol2.1	616	606,767,444	1,810	362,000	33.80
463	pond loach (2024)	Paramisgurnus dabryanus	GCF_030506205.2_PD_genome_1.1	220	1,043,485,661	1,120	224,000	44.67
464	pouting (hap1.1 2025)	Trisopterus luscus	GCA_976225255.1_fTriLus1.hap1.1	2,153	548,567,887	3,045	609,000	36.04
465	pouting (hap2.1 2025)	Trisopterus luscus	GCA_976225395.1_fTriLus1.hap2.1	1,704	529,862,677	2,841	568,200	36.53
466	predatory carp (Z2021 2022)	Chanodichthys erythropterus	GCF_024489055.1_ASM2448905v1	51	1,085,526,929	181	18,100	61.41
467	prehistoric monster fish (2019 refseq)	Thalassophryne amazonica	GCF_902500255.1_fThaAma1.1	464	2,446,592,878	2,554	12,594,266	59.92
468	prehistoric monster fish (alternate hap 2019)	Thalassophryne amazonica	GCA_902500245.1_fThaAma1.1_alternate_haplotype	19,579	1,767,810,094	8	248	58.58
469	rainbow smelt (alternate hap 2024)	Osmerus mordax	GCA_038355625.1_fOsmMor3.standard.alt	7,757	420,089,129	0	0	33.46
470	rainbow smelt (fOsmMor3 primary hap 2024)	Osmerus mordax	GCA_038355195.1_fOsmMor3.pri	365	497,673,479	1,907	364,200	35.25
471	rainbow smelt (fOsmMor3 primary hap 2024)	Osmerus mordax	GCF_038355195.1_fOsmMor3.pri	366	497,690,099	1,907	364,200	35.24
472	rainbow trout (Arlee)	Oncorhynchus mykiss	GCF_013265735.2_USDA_OmykA_1.1	743	2,341,688,614	486	6,184,519	53.80
473	rainbow trout (Swanson)	Oncorhynchus mykiss	GCF_002163495.1_Omyk_1.0	131,961	2,178,999,613	427,894	251,515,894	44.07
474	Rankin cod (hap1 2025)	Epinephelus rankini	GCA_048129235.1_fEpiMut1.hap1.cur.20240206	386	1,035,398,499	21	4,200	31.27
475	Rankin cod (hap2 2025)	Epinephelus rankini	GCA_048129065.1_fEpiMut1.hap2.cur.20240206	199	1,018,963,042	33	6,400	42.18
476	razorback sucker (HMW12.3.18 2022)	Xyrauchen texanus	GCF_025860055.1_RBS_HiC_50CHRs	1,746	2,186,823,573	1,873	936,500	51.92
477	red drum (XU1910 2020)	Sciaenops ocellatus	GCA_014183145.1_ASM1418314v1	34,462	684,633,790	11,577	30,266,824	23.28
478	red lionfish (2025)	Pterois volitans	GCA_977110895.1_fPteVol1.1	36	908,186,800	71	7,800	44.57
479	red seabream (2024)	Pagrus major	GCA_040436345.1_Pma_NU_1.0	24	785,972,034	278	27,800	34.90
480	red seabream (2024)	Pagrus major	GCF_040436345.1_Pma_NU_1.0	25	785,989,065	278	27,800	27.02
481	red-bellied piranha (fPygNat1 alternate hap 2020)	Pygocentrus nattereri	GCA_015220065.1_fPygNat1.alt	1,751	289,313,524	0	0	49.72
482	red-bellied piranha (Pna-1 2016)	Pygocentrus nattereri	GCF_001682695.1_Pygocentrus_nattereri-1.0.2	283,518	1,285,352,492	62,964	33,286,579	34.80
483	red-bellied piranha (primary hap 2020)	Pygocentrus nattereri	GCA_015220715.1_fPygNat1.pri	56	1,222,067,157	303	10,159,184	35.79
484	red-bellied piranha (primary hap 2020)	Pygocentrus nattereri	GCF_015220715.1_fPygNat1.pri	55	1,222,050,449	303	10,159,184	35.79
485	redfish (Tasmania AG114_WGS23_722 - 3 2025)	Centroberyx affinis	GCF_046629955.1_CSIRO-AGI_Caff_v1	6,232	774,638,115	0	0	30.21
486	reedfish (2021)	Erpetoichthys calabaricus	GCF_900747795.2_fErpCal1.3	169	3,613,551,144	1,431	29,707,657	47.53
487	reedfish (v1 alternate hap 2019)	Erpetoichthys calabaricus	GCA_900700845.2_fErpCal1.1_alternate_haplotype	38,593	2,607,661,443	5	52,479	45.67
488	Rhinogobio nasutus (DBWJ_T2T 2025)	Rhinogobio nasutus	GCA_048301585.1_ASM4830158v1	70	953,377,980	2	200	45.29
489	ringed pipefish (RoL2022-P2 2023)	Dunckerocampus dactyliophorus	GCF_027744805.1_RoL_Ddac_1.1	157	670,648,883	14	280	41.09
490	Rio pearlfish (Nwh7 v2 2021)	Nematolebias whitei	GCF_014905685.2_NemWhi1	18,998	1,218,316,901	100,521	97,663,390	42.85
491	river trout (v2 2021)	Salmo trutta	GCA_901001165.2_fSalTru1.2	1,441	2,371,880,186	3,941	73,600,705	55.89
492	roach minnow (alternate hap 2023)	Rutilus rutilus	GCA_951802655.1_fRutRut2.1_alternate_haplotype	4,606	1,042,711,183	6	1,200	48.42
493	roach minnow (primary hap 2023)	Rutilus rutilus	GCA_951802725.1_fRutRut2.1	85	1,100,195,650	471	94,200	49.02
494	rock goby (2025)	Gobius paganellus	GCA_965278345.2_fGobPag3.1	123	831,875,733	76	8,200	43.20
495	rock gunnel (alternate hap 2021)	Pholis gunnellus	GCA_910591705.2_fPhoGun1.2_alternate_haplotype	2,165	590,303,236	1	500	25.85
496	rock gunnel (primary hap 2021)	Pholis gunnellus	GCA_910591455.2_fPhoGun1.2	101	588,696,950	418	137,000	25.63
497	rock gunnel (primary hap 2021)	Pholis gunnellus	GCF_910591455.1_fPhoGun1.2	100	588,680,419	418	137,000	25.31
498	rohu (BAU-BD-2019 2022)	Labeo rohita	GCF_022985175.1_IGBB_LRoh.1.0	2,870	1,126,558,565	5,144	181,047,225	41.98
499	Rosablanca catfish (hap2 2023)	Trichomycterus rosablanca	GCA_030015355.1_fTriRos1.hap2	302	996,754,446	192	38,400	48.41
500	rouch bullseye (RE-2024b hap1 2024 refseq)	Pempheris klunzingeri	GCF_042242105.1_fPemKlu1.hap1	441	646,252,061	87	17,200	24.57
501	rough bullseye (RE-2024b hap2 2024)	Pempheris klunzingeri	GCA_042242125.1_fPemKlu1.hap2	84	632,781,980	93	18,300	30.94
502	rudd (Europe DD20220513a primary hap 2022)	Scardinius erythrophthalmus	GCA_024453875.1_ASM2445387v1	110	1,135,838,337	418	88,160	49.98
503	rudd (fScaEry2.hap1.1 2024)	Scardinius erythrophthalmus	GCA_964197995.1_fScaEry2.hap1.1	755	1,229,666,150	836	167,200	51.27
504	sablefish (Golden Eagle Sablefish UVic2021 2023)	Anoplopoma fimbria	GCF_027596085.1_Afim_UVic_2022	7,493	653,543,715	723	71,904	28.31
505	sailfin molly	Poecilia latipinna	GCF_001443285.1_P_latipinna-1.0	17,986	815,142,410	41,735	135,369,525	22.54
506	salamanderfish (hap1 2025)	Lepidogalaxias salamandroides	GCA_049190665.1_fLepSal2.hap1	2,987	735,065,728	1,365	269,000	44.00
507	salamanderfish (hap2 2025)	Lepidogalaxias salamandroides	GCA_049190655.1_fLepSal2.hap2	1,559	742,016,821	1,366	270,100	45.23
508	salema (2025)	Sarpa salpa	GCA_977007045.1_fSarSal1.1	35	782,240,472	64	6,900	34.69
509	sand goby (2025)	Pomatoschistus minutus	GCA_965276375.1_fPomMin1.1	106	861,176,092	386	43,900	46.56
510	sand smelt (2025)	Atherina presbyter	GCA_965295175.1_fAthPre1.1	127	1,040,595,279	212	21,700	38.93
511	sansaifugu (HTHZ2018 2019)	Takifugu flavidus	GCF_003711565.1_ASM371156v2	868	366,303,280	250	24,406	21.67
512	sardine (primary hap 2023 genbank)	Sardina pilchardus	GCA_963854185.1_fSarPil1.1	241	869,414,035	1,654	330,800	37.59
513	sardine (primary hap 2023 refseq)	Sardina pilchardus	GCF_963854185.1_fSarPil1.1	240	869,396,467	1,654	330,800	37.59
514	scaldfish (2025)	Arnoglossus laterna	GCA_965260895.1_fArnLat1.1	368	497,693,160	1,032	109,100	34.50
515	scribbled pipefish (RoL2023-P3 2023)	Corythoichthys intestinalis	GCF_030265065.1_ASM3026506v1	109	1,326,793,283	9	180	63.96
516	sea stickleback (SK-2024b hap1 2025)	Spinachia spinachia	GCA_048126635.1_SpiSpi1_v1.hap1	38	407,561,107	241	24,100	22.91
517	sea stickleback (SK-2024b hap2 2025)	Spinachia spinachia	GCA_048127205.1_SpiSpi1_v1.hap2	52	406,020,468	276	27,600	23.19
518	Senegalese sole	Solea senegalensis	GCF_019176455.1_IFAPA_SoseM_1	1,937	603,535,267	662	65,441	28.32
519	shanny (alternate hap 2023)	Lipophrys pholis	GCA_963383635.1_fLipPho2.1_alternate_haplotype	3,846	738,669,690	1	34	28.51
520	shanny (primary hap 2023)	Lipophrys pholis	GCA_963383615.1_fLipPho2.1	847	768,243,328	598	119,616	29.07
521	shanny (primary hap 2023)	Lipophrys pholis	GCF_963383615.1_fLipPho2.1	847	768,243,328	598	119,616	29.07
522	sharptooth jobfish (hap1 2024)	Pristipomoides typus	GCA_045363895.1_fPriTyp1.hap1	283	1,147,302,341	84	16,600	35.20
523	sharptooth jobfish (hap2 2024)	Pristipomoides typus	GCA_045363885.1_fPriTyp1.hap2	172	1,146,345,582	76	15,100	35.15
524	sheepshead minnow	Cyprinodon variegatus	GCF_000732505.1_C_variegatus-1.0	9,259	1,035,184,475	113,210	135,655,219	27.50
525	short-snouted seahorse (2025)	Hippocampus hippocampus	GCA_965263715.1_fHipHio1.1	50	452,196,560	70	7,800	33.80
526	shortfin molly	Poecilia mexicana	GCF_001443325.1_P_mexicana-1.0	18,102	801,710,366	37,507	121,884,386	22.83
527	shorthorn sculpin (2025)	Myoxocephalus scorpius	GCA_977012325.1_fMyoSco2.1	44	708,095,533	109	11,800	35.02
528	Siamese fighting fish (primary hap 2023)	Betta splendens	GCA_900634795.4_fBetSpl5.4	35	426,984,265	321	31,466	23.21
529	Siamese fighting fish (v1 alternate hap 2019)	Betta splendens	GCA_900651605.1_fBetSpl5.1_alternate_haplotype	3,705	426,643,682	2	125	22.60
530	Siamese fighting fish (v4 primary hap 2023)	Betta splendens	GCF_900634795.4_fBetSpl5.4	36	427,001,245	321	31,466	23.21
531	Siamese fighting fish (v5.4 alternate hap 2023)	Betta splendens	GCA_900651605.2_fBetSpl5.4_alternate_haplotype	3,764	441,035,931	108	2,919	23.26
532	silver carp (IHB0807247 2022)	Hypophthalmichthys molitrix	GCA_022817975.1_1.0	47,685	825,236,645	65,388	37,441,584	45.25
533	silver crucian carp (wild population from Czech Republic Cgi1373 2022)	Carassius gibelio	GCF_023724105.1_carGib1.2-hapl.c	51	1,583,351,535	2,597	1,296,088	45.06
534	silver spinyfin (hap1 2025)	Diretmus argenteus	GCA_048569125.1_fDirArg3.hap1	5,504	1,517,026,147	3,365	666,800	54.21
535	silver spinyfin (hap2 2025)	Diretmus argenteus	GCA_048569135.1_fDirArg3.hap2	4,595	1,884,132,620	3,473	694,419	55.04
536	small-headed clingfish (2025)	Apletodon dentatus	GCA_965542115.1_fAplDen1.1	114	863,952,356	68	9,500	45.01
537	smalleye Pacific opah (hap1 2023)	Lampris incognitus	GCA_029633845.1_fLamInc1.hap1	1,059	1,477,069,270	3,120	623,912	53.60
538	smalleye Pacific opah (hap2 2023 refseq)	Lampris incognitus	GCF_029633865.1_fLamInc1.hap2	544	1,482,357,630	3,115	622,730	53.30
539	smallmouth bass	Micropterus dolomieu	GCF_021292245.1_ASM2129224v1	15,020	829,587,215	34,581	3,005,762	28.32
540	smooth trunkfish (2025)	Rhinesomus triqueter	GCA_977090075.1_fRhiTri1.1	105	846,532,836	45	5,700	33.05
541	snake pipefish (RoL-2023_Sb 2023)	Entelurus aequoreus	GCF_033978785.1_RoL_Eaeq_v1.1	424	1,892,198,045	2,564	51,280	67.28
542	snook (hap1 2025)	Sphyraena novaehollandiae	GCA_050436885.1_fSphNov1.hap1.cur.20230825	128	607,437,362	132	26,400	24.05
543	snook (hap2 2025)	Sphyraena novaehollandiae	GCA_050436865.1_fSphNov1.hap2.cur.20230825	76	610,064,789	147	28,800	24.28
544	sobaity seabream (SH-A 2023)	Sparidentex hasta	GCA_030272975.1_ASM3027297v1	20,388	686,524,723	3,396	251,580	29.19
545	sockeye salmon (On170113-E2 v2 2019)	Oncorhynchus nerka	GCF_006149115.2_Oner_1.1	34,757	1,925,212,521	25,658	74,077,259	48.61
546	sockeye salmon (Pitt River 2024)	Oncorhynchus nerka	GCF_034236695.1_Oner_Uvic_2.0	11,378	2,645,636,310	4,351	1,747,557	57.62
547	South Georgia icefish (v2 primary hap 2022)	Pseudochaenichthys georgianus	GCF_902827115.2_fPseGeo1.2	1,563	1,026,222,745	2,603	1,081,697	45.78
548	southern bluefin tuna (alternate hap 2021)	Thunnus maccoyii	GCA_910596085.1_fThuMac1.1_alternate_haplotype	895	782,574,410	0	0	33.63
549	southern bluefin tuna (primary hap 2021 refseq)	Thunnus maccoyii	GCF_910596095.1_fThuMac1.1	58	782,423,979	184	31,592	26.89
550	southern platyfish	Xiphophorus maculatus	GCF_002775205.1_X_maculatus-5.0-male	102	704,321,165	156	3,327,905	28.29
551	Southwestern China cavefish	Sinocyclocheilus anshuiensis	GCF_001515605.1_SAMN03320099.WGS_v1.1	85,682	1,632,718,266	168,741	119,821,887	36.99
552	spangled emperor (hap1 2024)	Lethrinus nebulosus	GCA_045362495.1_fLetNeb1.hap1	226	1,133,212,262	196	38,700	29.01
553	spangled emperor (hap2 2024)	Lethrinus nebulosus	GCA_045362485.1_fLetNeb1.hap2	151	1,122,130,221	244	47,200	29.19
554	sphinx blenny (2025)	Aidablennius sphynx	GCA_977009285.1_fAidSph1.1	465	634,926,972	776	109,000	29.34
555	spiny chromis (Palm Island Apoly-LR-REF 2022)	Acanthochromis polyacanthus	GCF_021347895.1_KAUST_Apoly_ChrSc	81	956,771,783	871	74,752	35.47
556	spiny chromis (Palm Islands 2017)	Acanthochromis polyacanthus	GCF_002109545.1_ASM210954v1	30,414	991,584,656	209,115	148,830,929	22.65
557	spotted green pufferfish (2004)	Tetraodon nigroviridis	GCA_000180735.1_ASM18073v1	25,773	342,403,326	18,974	30,008,907	18.72
558	spotted handfish B.hirsutus (HB-005 2024)	Brachionichthys hirsutus	GCF_040956055.1_CSIRO-AGI_Bhir_v1	1,370	406,634,837	1,486	148,600	24.98
559	spotted pipefish (UIUO_Sarg 2025)	Stigmatopora argus	GCF_051989625.1_RoL_Sarg_1.0	233	464,095,202	57	1,140	43.74
560	spotted scat (primary hap 2021)	Scatophagus argus	GCA_020382885.1_fScaArg1.pri	48	570,802,272	77	1,711,559	21.27
561	spotted scorpionfish (2025)	Scorpaena plumieri	GCA_977109165.1_fScoPlm1.1	30	1,295,977,282	48	6,800	49.57
562	spotted sea bass (ZS-2023 2023)	Lateolabrax maculatus	GCA_031216445.1_YSFRI_Lmacu_1.1	109	632,510,465	0	0	26.28
563	spotted tilapia (v1 MD_Pm_ZW 2024)	Pelmatolapia mariae	GCF_036321145.1_Pm_UMD_F	792	940,981,472	23	1,150	30.76
564	spotted tilapia (v2 MD_Pm_ZW 2024)	Pelmatolapia mariae	GCF_036321145.2_Pm_UMD_F_2	791	972,201,687	24	1,200	30.69
565	spotted wolffish (MPS153535 2025)	Anarhichas minor	GCF_050575085.1_ASM5057508v1	328	643,880,946	5	5	28.94
566	sterlet (maternal hap 2022 refseq)	Acipenser ruthenus	GCF_902713425.1_fAciRut3.2_maternal_haplotype	1,731	1,899,810,788	433	86,300	43.22
567	sterlet (v2 paternal hap 2022)	Acipenser ruthenus	GCA_902713435.2_fAciRut3.2_paternal_haplotype	1,517	1,882,648,115	475	95,000	41.60
568	stippled clingfish (2025)	Gobiesox punctulatus	GCA_977017485.1_fGobPun1.1	32	556,726,225	77	8,600	33.21
569	stone loach (alternate hap 2022)	Barbatula barbatula	GCA_947034905.1_fBarBar1.1_alternate_haplotype	2,237	571,749,702	0	0	38.06
570	stone loach (primary hap 2022)	Barbatula barbatula	GCA_947034865.1_fBarBar1.1	100	617,663,352	825	165,000	39.89
571	stone loach (primary hap 2022)	Barbatula barbatula	GCF_947034865.1_fBarBar1.1	99	617,646,710	825	165,000	40.82
572	stone moroko (DD20220531a primary hap 2022)	Pseudorasbora parva	GCF_024679245.1_ASM2467924v1	81	1,228,868,788	497	102,560	63.65
573	straightnose pipefish (RoL-2023_Sa 2023)	Nerophis ophidion	GCF_033978795.1_RoL_Noph_v1.0	473	1,845,757,181	1,172	23,440	67.08
574	striated frogfish (MH-2024 2024)	Antennarius striatus	GCF_040054535.1_ASM4005453v1	42	548,561,997	18	2,715	29.69
575	striped catfish (fPanHyp1 alternate hap 2022)	Pangasianodon hypophthalmus	GCA_027382375.1_fPanHyp1.alt	3,274	738,869,872	1	45	37.85
576	striped catfish (primary hap 2022 refseq)	Pangasianodon hypophthalmus	GCF_027358585.1_fPanHyp1.pri	58	764,974,446	236	3,879,978	37.93
577	striped catfish Indonesia	Pangasianodon hypophthalmus	GCF_009078355.1_GENO_Phyp_1.0	150	758,973,678	463	175,919	32.50
578	striped catfish Vietnam	Pangasianodon hypophthalmus	GCF_003671635.1_VN_pangasius	567	715,760,110	23,755	19,239,465	30.11
579	striped red mullet (hap1.1 2025)	Mullus surmuletus	GCA_965276695.1_fMulSur1.hap1.1	131	569,117,735	536	58,800	30.29
580	striped red mullet (hap2.1 2025)	Mullus surmuletus	GCA_965276725.1_fMulSur1.hap2.1	78	564,409,684	508	54,300	29.98
581	striped sea-bass	Morone saxatilis	GCF_004916995.1_NCSU_SB_2.0	630	598,127,127	73,335	5,158,999	22.76
582	Sumatra barb	Puntigrus tetrazona	GCF_018831695.1_ASM1883169v1	1,122	730,818,536	5,075	394,129	32.49
583	swallowtail seaperch (2024)	Anthias anthias	GCA_964269795.2_fAntAnt1.2	66	796,149,257	103	14,500	37.59
584	swamp eel	Monopterus albus	GCF_001952655.1_M_albus_1.0	20,622	684,144,148	51,257	54,828,134	21.96
585	swordfish	Xiphias gladius	GCF_016859285.1_ASM1685928v1	1,482	691,780,295	449	224,500	23.97
586	Tachysurus vachellii (PV-2020 2023)	Tachysurus vachellii	GCF_030014155.1_HZAU_Pvac_v1	78	692,121,426	291	145,500	35.39
587	tambaqui	Colossoma macropomum	GCF_904425465.1_Colossoma_macropomum	1,269	1,221,847,006	420	37,940	35.37
588	thickback sole (alternate hap 2023)	Microchirus variegatus	GCA_963457655.1_fMicVar1.1_alternate_haplotype	2,058	697,398,261	0	0	39.38
589	thickback sole (primary hap 2023)	Microchirus variegatus	GCA_963457635.1_fMicVar1.1	188	724,694,306	454	90,800	40.27
590	thickback sole (primary hap 2023)	Microchirus variegatus	GCF_963457635.1_fMicVar1.1	188	724,694,306	454	90,800	41.20
591	thicklip grey mullet (alternate hap 2023)	Chelon labrosus	GCA_963514105.1_fCheLab1.1_alternate_haplotype	1,967	698,748,450	0	0	29.26
592	thicklip grey mullet (primary hap 2023)	Chelon labrosus	GCA_963514085.1_fCheLab1.1	363	717,420,143	610	122,000	27.59
593	threadfin butterflyfish (fChaAug3hap1 2025)	Chaetodon auriga	GCF_051107435.1_fChaAug3.hap1	187	663,087,921	19	3,000	24.24
594	threadfin butterflyfish (hap1 2025)	Chaetodon auriga	GCA_051107435.1_fChaAug3.hap1	188	663,104,447	19	3,000	24.24
595	threadfin butterflyfish (hap2 2025)	Chaetodon auriga	GCA_051107495.1_fChaAug3.hap2	81	644,463,717	23	3,700	23.20
596	three-spined stickleback	Gasterosteus aculeatus aculeatus	GCF_016920845.1_GAculeatus_UGA_version5	2,937	471,894,361	3,125	3,574,186	21.96
597	three-spined stickleback (fGasAcu3.hap1.1 2024)	Gasterosteus aculeatus	GCF_964276395.1_fGasAcu3.hap1.1	129	511,138,727	331	66,200	27.34
598	three-spined stickleback (hap1 2024)	Gasterosteus aculeatus	GCA_964276395.1_fGasAcu3.hap1.1	130	511,155,287	331	66,200	27.34
599	three-spined stickleback (hap2 2024)	Gasterosteus aculeatus	GCA_964276385.1_fGasAcu3.hap2.1	170	457,351,142	309	61,800	27.07
600	threespot wrasse (MK-OKI-2021-1 2023)	Halichoeres trimaculatus	GCF_033239565.1_fHalTri1.1	228	849,925,595	117	58,500	33.71
601	tidewater goby (DKJ021-1_F 2022)	Eucyclogobius newberryi	GCA_026437355.1_fEucNew1.0.hap2	755	913,837,424	894	89,400	47.96
602	tidewater goby (DKJ021-1_Fhap1 2022 refseq)	Eucyclogobius newberryi	GCF_026437365.1_fEucNew1.0.hap1	821	984,812,078	794	79,400	49.87
603	tiger tail seahorse (QL1 v2 2016)	Hippocampus comes	GCF_001891065.2_H_comes_QL1_v1.1	32,914	492,131,402	22,977	34,075,199	24.57
604	tompot blenny (2025)	Parablennius gattorugine	GCA_965278395.1_fParGat1.1	246	768,169,584	731	78,900	32.31
605	tomtate (2025)	Haemulon aurolineatum	GCA_977014745.1_fHaeAur1.1	86	729,967,414	13	1,500	40.10
606	tongue sole	Cynoglossus semilaevis	GCF_000523025.1_Cse_v1.0	29,643	470,199,494	33,269	24,157,720	24.84
607	topknot (2025)	Zeugopterus punctatus	GCA_977007055.1_fZeuPun1.1	121	535,409,667	796	88,200	30.73
608	topmouth culter (CATC2023 2024)	Culter alburnus	GCA_040182925.1_ASM4018292v1	37	1,052,771,736	31	3,100	56.73
609	torafugu (alternate hap 2019)	Takifugu rubripes	GCA_901000745.3_fTakRub1.2_alternate_haplotype	2,012	350,016,965	38	625,268	20.31
610	torafugu (fTakRub1.2 2019 refseq)	Takifugu rubripes	GCF_901000725.2_fTakRub1.2	128	384,126,662	402	3,688,529	20.93
611	torafugu (fTakRub1.3 2021 genbank)	Takifugu rubripes	GCA_901000725.3_fTakRub1.3	128	384,126,663	402	3,688,529	20.93
612	trahira (v1 hap1 2024 refseq)	Hoplias malabaricus	GCF_029633855.1_fHopMal1.hap1	598	1,186,371,479	989	65,101,941	37.57
613	trahira (v2 hap1 2024 genbank)	Hoplias malabaricus	GCA_029633855.2_fHopMal1.hap1	597	1,186,354,877	989	65,101,941	37.57
614	trahira (v2 hap2 2024)	Hoplias malabaricus	GCA_029633875.2_fHopMal1.hap2	451	1,026,599,506	792	38,873,505	38.80
615	trumpetfish (2025)	Aulostomus maculatus	GCA_975147505.1_fAulMac2.1	459	722,183,757	45	5,900	30.75
616	trumpetfish (SK-2024c 2025)	Aulostomus maculatus	GCA_048301465.1_ASM4830146v1	160	662,945,422	179	17,900	26.05
617	trumpetfish (SK-2024c 2025)	Aulostomus maculatus	GCA_048301475.1_ASM4830147v1	248	669,846,493	187	18,700	26.80
618	tub gurnard (fCheLuc1.hap2.1 2025)	Chelidonichthys lucerna	GCA_965644425.1_fCheLuc1.hap2.1	345	651,581,513	305	61,000	35.90
619	turbot (alternate hap 2023)	Scophthalmus maximus	GCA_963854755.1_fScoMax1.1_alternate_haplotype	2,723	540,345,941	0	0	25.56
620	turbot (primary hap 2023)	Scophthalmus maximus	GCA_963854745.1_fScoMax1.1	108	550,297,089	805	161,000	25.96
621	turbot (ysfricsl-2021 2022)	Scophthalmus maximus	GCF_022379125.1_ASM2237912v1	28	538,234,718	0	0	24.37
622	turquoise killifish (GRZ 2015)	Nothobranchius furzeri	GCF_001465895.1_Nfu_20140520	5,897	1,242,518,059	85,562	385,709,548	27.64
623	turquoise killifish (GRZ-AD 2024)	Nothobranchius furzeri	GCF_043380555.1_NfurGRZ-RIMD1	304	1,479,202,486	369	71,400	67.93
624	turquoise killifish (MZM-0403 2023)	Nothobranchius furzeri	GCF_027789165.1_UI_Nfuz_MZM_1.0	2,681	1,513,041,927	3,093	102,568,068	56.57
625	Venezuela gogy (2025)	Coryphopterus venezuelae	GCA_977063065.1_fCorVen1.1	95	1,143,957,084	93	10,000	44.09
626	walking catfish (CIFAMagur01 2020)	Clarias magur	GCA_013621035.1_C_magur1.0	3,484	941,297,321	605	469,042	37.15
627	walleye (19-12246 2023)	Sander vitreus	GCF_031162955.1_sanVit1	685	791,719,691	319	6,358,172	40.95
628	walleye pollock (NIFS_2021 2022)	Gadus chalcogrammus	GCF_026213295.1_NIFS_Gcha_1.0	168	629,936,721	2,816	281,600	38.86
629	warty frogfish (fAntMac1 alternate hap 2020)	Antennarius maculatus	GCA_013347815.1_fAntMac1.alt	2,294	530,348,589	0	0	29.49
630	warty frogfish (primary hap 2020)	Antennarius maculatus	GCA_013358685.1_fAntMac1.pri	155	549,949,511	219	733,384	29.79
631	warty frogfish (primary hap 2026)	Antennarius maculatus	GCA_013358685.2_fAntMac1.pri	154	549,913,291	219	733,384	29.79
632	western mosquitofish	Gambusia affinis	GCF_019740435.1_SWU_Gaff_1.0	37	680,166,006	181	17,569,858	26.88
633	western speckled dace (OS25496 2023)	Rhinichthys klamathensis goyatoka	GCF_029890125.1_OSU_Roscu_1.1	930	1,065,491,053	0	0	48.43
634	westslope cutthroat trout (Uvic-CL-2024 2024)	Oncorhynchus clarkii lewisi	GCF_045791955.1_UVic_Ocla_1.0	3,266	2,404,487,246	1,381	138,100	54.37
635	White Sands pupfish	Cyprinodon tularosa	GCF_016077235.1_ASM1607723v1	2,003	1,086,882,241	0	0	38.10
636	wide-bodied pipefish (UIUO_SnigA 2025)	Stigmatopora nigra	GCF_051989575.1_RoL_Snig_1.1	156	375,402,015	105	2,100	36.21
637	wolf-eel	Anarrhichthys ocellatus	GCF_004355925.1_GSC_Weel_1.0	10,315	611,444,226	23,891	43,723,504	22.11
638	woolly sculpin (alternate hap CAN_PGR_092001 2022)	Clinocottus analis	GCA_023055415.1_fCliAna1.0.a	171	534,899,999	222	22,200	25.81
639	woolly sculpin (CAN_PGR_092001 2022)	Clinocottus analis	GCA_023055335.1_fCliAna1.0.p	443	538,118,947	219	21,900	25.91
640	woolly sculpin (CAN_PGR_092001 primary hap 2022)	Clinocottus analis	GCF_023055335.1_fCliAna1.0.p	442	538,100,726	219	21,900	25.92
641	worm pipefish (v2.1 RoL_2023-P12025)	Nerophis lumbriciformis	GCF_033978685.3_RoL_Nlum_v2.1	230	1,774,801,482	40	908	69.86
642	Wuchang bream	Megalobrama amblycephala	GCF_018812025.1_ASM1881202v1	243	1,109,888,616	1,281	1,913,768	43.12
643	X-ray tetra P.maxillaris (Tingi 2024)	Pristella maxillaris	GCA_045781885.1_ASM4578188v1	157	1,109,133,250	0	0	43.95
644	Yangtze koukloug (SWU-2019 2020)	Onychostoma macrolepis	GCF_012432095.1_ASM1243209v1	353	886,586,436	617	3,343,332	50.19
645	yellow and blueback fusilier (OG672 2025)	Caesio teres	GCA_048129025.1_fCaeTer1.1_haplotype_2	250	1,033,416,279	17	3,400	31.40
646	yellow and blueback fusilier (OG672 2025)	Caesio teres	GCA_048129055.1_fCaeTer1.1_haplotype_1	323	1,078,118,487	29	5,800	33.44
647	yellow catfish (hzauxx_2018 2022)	Tachysurus fulvidraco	GCF_022655615.1_HZAU_PFXX_2.0	517	712,016,913	817	399,063	35.54
648	yellow catfish (Tf-2017 2018)	Tachysurus fulvidraco	GCF_003724035.1_ASM372403v1	663	713,810,725	1,760	6,333,458	35.55
649	yellow perch (YP-PL-M2 2019)	Perca flavescens	GCF_004354835.1_PFLA_1.0	268	877,456,336	831	414,502	35.96
650	yellowfin seabream (v.2019 alternate hap 2020)	Acanthopagrus latus	GCA_904848175.1_fAcaLat1.1_alternate_haplotype	349	47,986,553	80	8,000	20.44
651	yellowfin seabream (v.2019 primary hap 2020)	Acanthopagrus latus	GCA_904848185.1_fAcaLat1.1	65	685,127,588	149	14,900	22.83
652	yellowfin seabream (v.2019 primary hap 2020)	Acanthopagrus latus	GCF_904848185.1_fAcaLat1.1	66	685,144,197	149	14,900	22.83
653	yellowfin tuna (alternate hap 2021)	Thunnus albacares	GCA_914744365.1_fThuAlb1.1_alternate_haplotype	640	786,643,039	0	0	28.56
654	yellowfin tuna (alternate hap 2023)	Thunnus albacares	GCA_914744365.2_fThuAlb1.2_alternate_haplotype	640	786,643,039	0	0	28.57
655	yellowfin tuna (primary hap 2021)	Thunnus albacares	GCF_914725855.1_fThuAlb1.1	68	792,101,331	70	23,300	27.09
656	yellowspot frogmouth (2025)	Chaunax flavomaculatus	GCA_977071325.1_fChaFls1.1	53	673,279,983	48	6,300	27.80
657	yellowtail amberjack (v2 SW California HSWRI2012SDOR001 2017)	Seriola lalandi dorsalis	GCF_002814215.2_Sedor1	98,345	731,697,021	33,661	16,134,034	25.04
658	yellowtail snapper (2025)	Ocyurus chrysurus	GCA_977019275.1_fOcyChr1.1	475	1,030,891,425	205	27,900	52.67
659	zebra mbuna (Mazinzi reef 2018)	Maylandia zebra	GCF_000238955.4_M_zebra_UMD2a	1,690	957,485,262	641	64,100	31.59
660	zebra mbuna (NMK-2024a 2024)	Maylandia zebra	GCF_041146795.1_Mzebra_GT3a	63	962,175,383	155	11,255,775	39.41
661	zebrafish (fDanRer4 alternate hap 2022)	Danio rerio	GCA_944039255.1_fDanRer4.1_alternate_haplotype	4,719	458,104,506	0	0	59.54
662	zebrafish (GRCz12tu Tuebingen 2025)	Danio rerio	GCF_049306965.1_GRCz12tu	26	1,448,808,562	13,351	13,810	60.69
663	zebrafish (M-AB 2025)	Danio rerio	GCA_052040795.1_GRCz12ab	25	1,450,693,629	1,933	1,992	60.69
664	zebrafish (T5D 2021)	Danio rerio	GCA_018400075.1_ASM1840007v1	25	1,338,639,271	20,876	1,845,030	61.21
665	zebrafish (WGS:CAHPTA01 2020)	Danio rerio	GCA_903684865.1_fDreABH1.1	1,252	1,354,075,779	712	197,709	61.16
666	zebrafish (WGS:CAHPTB02 2020)	Danio rerio	GCA_903684855.2_fDreTuH1.2	755	1,360,506,095	1,352	82,877	60.94
667	zebrafish (WGS:CALUEM01 primary hap 2022)	Danio rerio	GCA_944039275.1_fDanRer4.1	73	1,413,675,870	381	122,395	51.91
668	zebrafish GRCz11	Danio rerio	GCF_000002035.6_GRCz11	1,923	1,679,203,469	20,258	4,693,618	57.84
669	zig-zag eel (alternate hap)	Mastacembelus armatus	GCA_900700395.1_fMasArm1.2_alternate_haplotype	1,437	43,703,874	0	0	18.09
670	zig-zag eel (primary hap 2021)	Mastacembelus armatus	GCF_900324485.3_fMasArm1.3	122	591,935,101	238	13,231,344	23.47
671	zig-zag eel (v1.2 2019 refseq)	Mastacembelus armatus	GCF_900324485.2_fMasArm1.2	123	591,951,587	238	13,231,344	23.47
672	zig-zag eel (v1.3 2021 genbank)	Mastacembelus armatus	GCA_900324485.3_fMasArm1.3	123	591,951,591	238	13,231,344	23.47
TOTALS:	total assembly count 672			2,922,752	620,722,199,790	8,210,005	5,832,995,445

Additional hubs with collections of assemblies
Collection	Hub index pages:	Assembly statistics:	Track statistics:
Primates	617 assemblies	assembly stats	track stats
Mammals	869 assemblies	assembly stats	track stats
Birds	563 assemblies	assembly stats	track stats
Fishes	672 assemblies	assembly stats	track stats
other vertebrates	421 assemblies	assembly stats	track stats
Invertebrates	1946 assemblies	assembly stats	track stats
Plants	446 assemblies	assembly stats	track stats
Fungi	4128 assemblies	assembly stats	track stats
Viruses	15063 assemblies	assembly stats	track stats
Archaea	2702 assemblies	assembly stats	track stats
Bacteria	22351 assemblies	assembly stats	track stats
legacy/superseded	691 assemblies	assembly stats	track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project	1303 assemblies	assembly stats	track stats
CCGP - The California Conservation Genomics Project	126 assemblies	assembly stats	track stats
HPRC - Human Pangenome Reference Consortium	464 assemblies	assembly stats	track stats
BRC - BRC Analytics - Bioinformatics Research Center	5519 assemblies	assembly stats	track stats