This directory contains the Dec. 12, 2000 GenBank freeze ordered and
oriented according to the corresponding fingerprint map and genome
layout from Wash. U., taking into account overlap between fragments
and bridging mRNA, EST, plasmid and BAC end pairs. Chromosomes 21
and 22 are the finished versions as obtained from NCBI. This directory
includes the following files:
contigFa.zip - The working draft sequence one file per
fingerprint contig (clone layout) in Fasta format. Unpacks
with one directory for each chromosome and one subdirectory for each
fingerprint contig.
contigFaMasked.zip - RepeatMasked version of contigFa.zip (with
N's in place of repeating elements.)
contigAgp.zip - Description of how the working draft was generated from
fragments at a contig layout level.
chromFa.zip - Similar to contigFa.zip, but it unpacks to one file per
chromosome.
chromFaMasked.zip - RepeatMasked version of chromFa.zip
chromAgp.zip - Similar to contigAGP.zip, but it unpacks to one file per
chromosome.
Name Last modified Size Description
Parent Directory -
liftAll.zip 2001-04-11 10:32 12K
chromAgp.zip 2001-04-05 16:18 4.7M
contigAgp.zip 2001-05-29 16:23 4.7M
chromOut.zip 2001-04-05 17:45 72M
contigFaMasked.zip 2001-03-31 21:37 506M
chromFaMasked.zip 2001-04-05 16:22 508M
qual.zip 2001-05-23 14:43 786M
contigFa.zip 2001-03-31 21:26 799M
chromFa.zip 2001-04-05 16:58 801M
database.zip 2001-11-26 10:01 1.1G