This directory contains reciprocal-best netted chains for xenTro9-galGal5. - xenTro9.galGal5.rbest.net.gz: xenTro9-referenced recip.best net to galGal5. - xenTro9.galGal5.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from xenTro9 to galGal5 through the recip.best net. - galGal5.xenTro9.rbest.net.gz: galGal5-referenced recip.best net. - galGal5.xenTro9.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/xenTro9.galGal5.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-04-08 01:09 - xenTro9.galGal5.rbest.net.gz 2017-04-07 23:15 4.6M md5sum.txt 2017-04-07 23:15 256 xenTro9.galGal5.rbest.chain.gz 2017-04-07 23:15 2.7M galGal5.xenTro9.rbest.chain.gz 2017-04-07 23:15 2.7M galGal5.xenTro9.rbest.net.gz 2017-04-07 23:15 4.9M