This directory contains reciprocal-best netted chains for xenTro9-fr3.

 - xenTro9.fr3.rbest.net.gz: xenTro9-referenced recip.best net to fr3.
 - xenTro9.fr3.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from xenTro9 to fr3 through the recip.best net.

 - fr3.xenTro9.rbest.net.gz: fr3-referenced recip.best net.
 - fr3.xenTro9.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/xenTro9.fr3.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                       Last modified      Size  Description
      Parent Directory                                -   
      axtRBestNet/               2017-04-08 01:54    -   
      md5sum.txt                 2017-04-07 23:13  240   
      fr3.xenTro9.rbest.chain.gz 2017-04-07 23:13  3.0M  
      xenTro9.fr3.rbest.chain.gz 2017-04-07 23:13  3.0M  
      xenTro9.fr3.rbest.net.gz   2017-04-07 23:13  5.0M  
      fr3.xenTro9.rbest.net.gz   2017-04-07 23:12  5.1M