This directory contains reciprocal-best netted chains for xenTro10-hg38. - xenTro10.hg38.rbest.net.gz: xenTro10-referenced recip.best net to hg38. - xenTro10.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from xenTro10 to hg38 through the recip.best net. - hg38.xenTro10.rbest.net.gz: hg38-referenced recip.best net. - hg38.xenTro10.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/xenTro10.hg38.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2021-07-20 13:42 - md5sum.txt 2021-03-02 10:52 248 hg38.xenTro10.rbest.chain.gz 2021-03-02 10:52 7.9M xenTro10.hg38.rbest.chain.gz 2021-03-02 10:52 7.9M xenTro10.hg38.rbest.net.gz 2021-03-02 10:52 13M hg38.xenTro10.rbest.net.gz 2021-03-02 10:52 14M