This directory contains reciprocal-best netted chains for tetNig2-galGal6. - tetNig2.galGal6.rbest.net.gz: tetNig2-referenced recip.best net to galGal6. - tetNig2.galGal6.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from tetNig2 to galGal6 through the recip.best net. - galGal6.tetNig2.rbest.net.gz: galGal6-referenced recip.best net. - galGal6.tetNig2.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.tetNig2.galGal6.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-27 01:22 - galGal6.tetNig2.rbest.chain.gz 2018-10-27 00:06 3.3M galGal6.tetNig2.rbest.net.gz 2018-10-27 00:06 6.0M md5sum.txt 2018-10-27 00:06 256 tetNig2.galGal6.rbest.chain.gz 2018-10-27 00:06 3.3M tetNig2.galGal6.rbest.net.gz 2018-10-27 00:06 5.6M