This directory contains reciprocal-best netted chains for tarSyr2-rn6.
- tarSyr2.rn6.rbest.net.gz: tarSyr2-referenced recip.best net to rn6.
- tarSyr2.rn6.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from tarSyr2 to rn6 through the recip.best net.
- rn6.tarSyr2.rbest.net.gz: rn6-referenced recip.best net.
- rn6.tarSyr2.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/tarSyr2.rn6.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-01-20 10:46 -
md5sum.txt 2017-01-19 14:07 240
rn6.tarSyr2.rbest.chain.gz 2017-01-19 14:03 71M
rn6.tarSyr2.rbest.net.gz 2017-01-19 14:02 109M
tarSyr2.rn6.rbest.chain.gz 2017-01-19 14:05 71M
tarSyr2.rn6.rbest.net.gz 2017-01-19 14:07 145M