This directory contains reciprocal-best netted chains for tarSyr2-micMur2.

 - tarSyr2.micMur2.rbest.net.gz: tarSyr2-referenced recip.best net to micMur2.
 - tarSyr2.micMur2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from tarSyr2 to micMur2 through the recip.best net.

 - micMur2.tarSyr2.rbest.net.gz: micMur2-referenced recip.best net.
 - micMur2.tarSyr2.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/tarSyr2.micMur2.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                           Last modified      Size  Description
      Parent Directory                                    -   
      axtRBestNet/                   2015-06-08 14:58    -   
      md5sum.txt                     2015-06-08 13:41  256   
      tarSyr2.micMur2.rbest.net.gz   2015-06-08 13:41  133M  
      tarSyr2.micMur2.rbest.chain.gz 2015-06-08 13:39   77M  
      micMur2.tarSyr2.rbest.chain.gz 2015-06-08 13:39   77M  
      micMur2.tarSyr2.rbest.net.gz   2015-06-08 13:37  148M