This directory contains reciprocal-best netted chains for rn7-hg38.
- rn7.hg38.rbest.net.gz: rn7-referenced recip.best net to hg38.
- rn7.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from rn7 to hg38 through the recip.best net.
- hg38.rn7.rbest.net.gz: hg38-referenced recip.best net.
- hg38.rn7.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/rn7.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
hg38.rn7.rbest.net.gz 2021-02-05 11:00 143M
rn7.hg38.rbest.net.gz 2021-02-05 11:04 90M
hg38.rn7.rbest.chain.gz 2021-02-05 11:01 65M
rn7.hg38.rbest.chain.gz 2021-02-05 11:02 65M
md5sum.txt 2021-02-05 11:04 228
axtRBestNet/ 2021-04-27 10:26 -