This directory contains reciprocal-best netted chains for rheMac8-mm10.
- rheMac8.mm10.rbest.net.gz: rheMac8-referenced recip.best net to mm10.
- rheMac8.mm10.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from rheMac8 to mm10 through the recip.best net.
- mm10.rheMac8.rbest.net.gz: mm10-referenced recip.best net.
- mm10.rheMac8.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/rheMac8.mm10.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2016-02-10 23:11 -
md5sum.txt 2016-02-10 16:28 244
mm10.rheMac8.rbest.chain.gz 2016-02-10 16:25 64M
rheMac8.mm10.rbest.chain.gz 2016-02-10 16:26 64M
mm10.rheMac8.rbest.net.gz 2016-02-10 16:24 91M
rheMac8.mm10.rbest.net.gz 2016-02-10 16:28 137M