This directory contains reciprocal-best netted chains for petMar1-hg18.

 - petMar1-referenced net to hg18.
 - petMar1.hg18.rbest.chain.gz: chains extracted from the
   net.  These can be passed to the liftOver program to translate coords
   from petMar1 to hg18 through the net.

 - hg18-referenced net.
 - hg18.petMar1.rbest.chain.gz: "liftOver" chains.
 - Checksum values for all files in this directory can be found in md5sum.txt.

 - axtRBestNet/petMar1.hg18.rbest.axt.gz: chained and netted alignments,
   i.e. the best chains in the Lamprey genome, with gaps in the best
   chains filled in by next-best chains where possible.  Only alignments
   that are reciprocal best are kept.  The axt format is
   described in .
      Name                        Last modified      Size  Description
Parent Directory - axtRBestNet/ 2008-06-03 12:41 - hg18.petMar1.rbest.chain.gz 2008-04-17 11:48 1.6M 2008-04-17 11:48 2.3M md5sum.txt 2008-04-17 11:48 244 petMar1.hg18.rbest.chain.gz 2008-04-17 11:48 1.6M 2008-04-17 11:48 2.3M