This directory contains reciprocal-best netted chains for panTro5-hg38.

 - panTro5.hg38.rbest.net.gz: panTro5-referenced recip.best net to hg38.
 - panTro5.hg38.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from panTro5 to hg38 through the recip.best net.

 - hg38.panTro5.rbest.net.gz: hg38-referenced recip.best net.
 - hg38.panTro5.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/panTro5.hg38.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      panTro5.hg38.rbest.net.gz   2016-08-04 10:05   21M  
      panTro5.hg38.rbest.chain.gz 2016-08-04 10:05   13M  
      md5sum.txt                  2016-08-04 10:05  244   
      hg38.panTro5.rbest.net.gz   2016-08-04 10:05   22M  
      hg38.panTro5.rbest.chain.gz 2016-08-04 10:05   13M  
      axtRBestNet/                2016-08-04 14:04    -