This directory contains reciprocal-best netted chains for panPan2-panTro4.

 - panPan2.panTro4.rbest.net.gz: panPan2-referenced recip.best net to panTro4.
 - panPan2.panTro4.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from panPan2 to panTro4 through the recip.best net.

 - panTro4.panPan2.rbest.net.gz: panTro4-referenced recip.best net.
 - panTro4.panPan2.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/panPan2.panTro4.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                           Last modified      Size  Description
      Parent Directory                                    -   
      axtRBestNet/                   2016-05-27 12:42    -   
      md5sum.txt                     2016-05-27 10:41  256   
      panTro4.panPan2.rbest.chain.gz 2016-05-27 10:40  8.5M  
      panPan2.panTro4.rbest.chain.gz 2016-05-27 10:40  8.5M  
      panPan2.panTro4.rbest.net.gz   2016-05-27 10:40   11M  
      panTro4.panPan2.rbest.net.gz   2016-05-27 10:40   17M