This directory contains reciprocal-best netted chains for neoSch1-hg38.
- neoSch1.hg38.rbest.net.gz: neoSch1-referenced recip.best net to hg38.
- neoSch1.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from neoSch1 to hg38 through the recip.best net.
- hg38.neoSch1.rbest.net.gz: hg38-referenced recip.best net.
- hg38.neoSch1.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/neoSch1.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2020-11-23 13:32 -
hg38.neoSch1.rbest.chain.gz 2018-03-16 10:54 79M
hg38.neoSch1.rbest.net.gz 2018-03-16 10:52 152M
md5sum.txt 2018-03-16 11:01 244
neoSch1.hg38.rbest.chain.gz 2018-03-16 10:55 79M
neoSch1.hg38.rbest.net.gz 2018-03-16 11:01 132M