This directory contains reciprocal-best netted chains for neoSch1-canFam4. - neoSch1.canFam4.rbest.net.gz: neoSch1-referenced recip.best net to canFam4. - neoSch1.canFam4.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from neoSch1 to canFam4 through the recip.best net. - canFam4.neoSch1.rbest.net.gz: canFam4-referenced recip.best net. - canFam4.neoSch1.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/neoSch1.canFam4.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2020-11-23 13:34 - md5sum.txt 2020-07-14 05:30 256 neoSch1.canFam4.rbest.net.gz 2020-07-14 05:30 115M neoSch1.canFam4.rbest.chain.gz 2020-07-14 05:29 65M canFam4.neoSch1.rbest.chain.gz 2020-07-14 05:28 65M canFam4.neoSch1.rbest.net.gz 2020-07-14 05:27 109M