This directory contains reciprocal-best netted chains for neoSch1-canFam4.
- neoSch1.canFam4.rbest.net.gz: neoSch1-referenced recip.best net to canFam4.
- neoSch1.canFam4.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from neoSch1 to canFam4 through the recip.best net.
- canFam4.neoSch1.rbest.net.gz: canFam4-referenced recip.best net.
- canFam4.neoSch1.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/neoSch1.canFam4.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2020-11-23 13:34 -
canFam4.neoSch1.rbest.chain.gz 2020-07-14 05:28 65M
canFam4.neoSch1.rbest.net.gz 2020-07-14 05:27 109M
md5sum.txt 2020-07-14 05:30 256
neoSch1.canFam4.rbest.chain.gz 2020-07-14 05:29 65M
neoSch1.canFam4.rbest.net.gz 2020-07-14 05:30 115M