This directory contains reciprocal-best netted chains for nanPar1-xenTro7.

 - nanPar1.xenTro7.rbest.net.gz: nanPar1-referenced recip.best net to xenTro7.
 - nanPar1.xenTro7.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from nanPar1 to xenTro7 through the recip.best net.

 - xenTro7.nanPar1.rbest.net.gz: xenTro7-referenced recip.best net.
 - xenTro7.nanPar1.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/nanPar1.xenTro7.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                           Last modified      Size  Description
      Parent Directory                                    -   
      axtRBestNet/                   2015-06-15 10:00    -   
      nanPar1.xenTro7.rbest.net.gz   2015-06-15 09:54   12M  
      md5sum.txt                     2015-06-15 09:54  256   
      nanPar1.xenTro7.rbest.chain.gz 2015-06-15 09:54  7.1M  
      xenTro7.nanPar1.rbest.chain.gz 2015-06-15 09:54  7.1M  
      xenTro7.nanPar1.rbest.net.gz   2015-06-15 09:54   12M