This directory contains reciprocal-best netted chains for monDom5-melGal5.

 - monDom5.melGal5.rbest.net.gz: monDom5-referenced recip.best net to melGal5.
 - monDom5.melGal5.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from monDom5 to melGal5 through the recip.best net.

 - melGal5.monDom5.rbest.net.gz: melGal5-referenced recip.best net.
 - melGal5.monDom5.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.monDom5.melGal5.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                           Last modified      Size  Description
      Parent Directory                                    -   
      axtRBestNet/                   2017-01-20 12:30    -   
      md5sum.txt                     2017-01-19 22:09  256   
      melGal5.monDom5.rbest.chain.gz 2017-01-19 22:08  5.0M  
      melGal5.monDom5.rbest.net.gz   2017-01-19 22:08  8.2M  
      monDom5.melGal5.rbest.chain.gz 2017-01-19 22:08  5.0M  
      monDom5.melGal5.rbest.net.gz   2017-01-19 22:09  8.7M