This directory contains compressed multiple alignments of the
following assemblies to the mouse genome (mm7, Aug. 2005):
- rat (rn3, Jun. 2003)
- rabbit (May 2005, oryCun1)
- human (May 2004, hg17)
- chimp (Nov 2003, panTro1)
- macaque (rheMac1)
- dog (May 2005, canFam2)
- cow (Mar 2005, bosTau2)
- armadillo (May 2005, dasNov1)
- elephant (May 2005, loxAfr1)
- tenrec (Jul 2005, echTel1)
- opossum (Jun 2005, monDom2)
- chicken (Feb 2004, galGal2)
- frog (Oct 2004, xenTro1)
- zebrafish (May 2005, danRer3)
- Tetraodon (Feb 2004, tetNig1)
- Fugu (Aug 2002, fr1)
Files included in this directory:
- chr*.maf.gz files: each contain all the alignments to that
particular mouse chromosome.
For a description of multiple alignment format (MAF), see
http://genome.ucsc.edu/goldenPath/help/maf.html.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu,
then go to the directory goldenPath/mm7/multiz17way. To download
multiple files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the files in this directory are freely usable for any
purpose. For data use restrictions regarding the individual
genome assemblies, see http://genome.ucsc.edu/goldenPath/credits.html.
Name Last modified Size Description
Parent Directory -
maf/ 2019-11-06 11:04 -
chr2.maf.gz 2005-11-30 03:46 312M
chr1.maf.gz 2005-11-30 02:44 299M
chr4.maf.gz 2005-11-29 23:44 243M
chr3.maf.gz 2005-11-29 23:20 241M
chr6.maf.gz 2005-11-29 22:51 231M
chr5.maf.gz 2005-11-29 22:24 225M
chr11.maf.gz 2005-11-29 21:55 213M
chr10.maf.gz 2005-11-29 21:23 203M
chr9.maf.gz 2005-11-29 21:18 207M
chr7.maf.gz 2005-11-29 21:11 204M
chr8.maf.gz 2005-11-29 20:54 197M
chr12.maf.gz 2005-11-29 20:20 184M
chr14.maf.gz 2005-11-29 20:11 183M
chrX.maf.gz 2005-11-29 20:05 182M
chr13.maf.gz 2005-11-29 20:02 176M
chr15.maf.gz 2005-11-29 18:56 156M
chr16.maf.gz 2005-11-29 18:47 152M
chr18.maf.gz 2005-11-29 18:33 143M
chr17.maf.gz 2005-11-29 18:12 136M
chr19.maf.gz 2005-11-29 17:26 106M
chrUn_random.maf.gz 2005-11-29 15:16 11M
chrY_random.maf.gz 2005-11-29 15:13 13M
chr14_random.maf.gz 2005-11-29 15:12 4.4M
chr1_random.maf.gz 2005-11-29 15:11 4.3M
chr3_random.maf.gz 2005-11-29 15:10 3.1M
chr7_random.maf.gz 2005-11-29 15:10 3.1M
chr6_random.maf.gz 2005-11-29 15:10 3.0M
chr17_random.maf.gz 2005-11-29 15:10 2.7M
chr9_random.maf.gz 2005-11-29 15:10 2.6M
chr13_random.maf.gz 2005-11-29 15:10 2.7M
chr8_random.maf.gz 2005-11-29 15:09 2.6M
chr12_random.maf.gz 2005-11-29 15:09 2.4M
chr16_random.maf.gz 2005-11-29 15:09 2.1M
chr10_random.maf.gz 2005-11-29 15:09 2.0M
chr15_random.maf.gz 2005-11-29 15:09 2.0M
chr19_random.maf.gz 2005-11-29 15:09 1.5M
chr5_random.maf.gz 2005-11-29 15:09 1.6M
chrY.maf.gz 2005-11-29 15:08 1.3M
chr18_random.maf.gz 2005-11-29 15:08 1.2M
chrM.maf.gz 2005-11-29 15:08 100K