This directory contains compressed multiple alignments of the
following assemblies to the mouse genome (mm6, Mar. 2005):
- rat (rn3, Jun. 2003)
- human (hg17, May 2004)
- dog (canFam2, May. 2005)
- cow (bosTau1, Sep. 2004)
- opossum (monDom1, Oct. 2004)
- chicken (galGal2, Feb. 2004)
- frog (xenTro1, Oct. 2004)
- zebrafish (danRer3, May. 2005)
- Tetraodon (tetNig1, Feb. 2004)
Files included in this directory:
- chr*.maf.gz files: each contain all the alignments to that
particular mouse chromosome.
For a description of multiple alignment format (MAF), see
http://genome.ucsc.edu/goldenPath/help/maf.html.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu,
then go to the directory goldenPath/mm6/multiz10way. To download
multiple files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the files in this directory are freely usable for any
purpose. For data use restrictions regarding the individual
genome assemblies, see http://genome.ucsc.edu/goldenPath/credits.html.
Name Last modified Size Description
Parent Directory -
chr2.maf.gz 2005-12-05 20:05 202M
chr1.maf.gz 2005-12-05 19:50 196M
chr4.maf.gz 2005-12-05 18:52 158M
chr3.maf.gz 2005-12-05 18:49 157M
chr6.maf.gz 2005-12-05 18:37 151M
chr5.maf.gz 2005-12-05 18:36 149M
chr11.maf.gz 2005-12-05 18:27 137M
chr9.maf.gz 2005-12-05 18:18 133M
chr10.maf.gz 2005-12-05 18:17 133M
chr7.maf.gz 2005-12-05 18:17 134M
chr8.maf.gz 2005-12-05 18:10 129M
chrX.maf.gz 2005-12-05 18:00 124M
chr14.maf.gz 2005-12-05 17:59 120M
chr12.maf.gz 2005-12-05 17:57 117M
chr13.maf.gz 2005-12-05 17:50 113M
chr15.maf.gz 2005-12-05 17:43 105M
chr16.maf.gz 2005-12-05 17:37 98M
chr18.maf.gz 2005-12-05 17:33 93M
chr17.maf.gz 2005-12-05 17:29 90M
chr19.maf.gz 2005-12-05 17:14 67M
chrUn_random.maf.gz 2005-12-05 16:41 22M
chrY_random.maf.gz 2005-12-05 16:36 12M
chr12_random.maf.gz 2005-12-05 16:35 2.7M
chr3_random.maf.gz 2005-12-05 16:35 2.9M
chr13_random.maf.gz 2005-12-05 16:35 3.0M
chr7_random.maf.gz 2005-12-05 16:34 2.6M
chr5_random.maf.gz 2005-12-05 16:34 1.7M
chr14_random.maf.gz 2005-12-05 16:34 1.4M
chr8_random.maf.gz 2005-12-05 16:34 1.6M
chr16_random.maf.gz 2005-12-05 16:34 1.4M
chr6_random.maf.gz 2005-12-05 16:34 1.1M
chr17_random.maf.gz 2005-12-05 16:34 1.2M
chr1_random.maf.gz 2005-12-05 16:34 1.1M
chrY.maf.gz 2005-12-05 16:34 950K
chr15_random.maf.gz 2005-12-05 16:34 778K
chr19_random.maf.gz 2005-12-05 16:34 631K
chr18_random.maf.gz 2005-12-05 16:34 744K
chr10_random.maf.gz 2005-12-05 16:34 462K
chr9_random.maf.gz 2005-12-05 16:34 358K
chrM.maf.gz 2005-12-05 16:33 61K