This directory contains reciprocal-best netted chains for mm39-rn6. - mm39.rn6.rbest.net.gz: mm39-referenced recip.best net to rn6. - mm39.rn6.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from mm39 to rn6 through the recip.best net. - rn6.mm39.rbest.net.gz: rn6-referenced recip.best net. - rn6.mm39.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.mm39.rn6.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - mm39.rn6.rbest.net.gz 2020-10-21 08:55 120M rn6.mm39.rbest.net.gz 2020-10-21 08:51 108M mm39.rn6.rbest.chain.gz 2020-10-21 08:53 68M rn6.mm39.rbest.chain.gz 2020-10-21 08:52 68M md5sum.txt 2020-10-21 08:55 228 axtRBestNet/ 2021-03-15 15:49 -