This directory contains reciprocal-best netted chains for mm39-monDom5.

 - mm39.monDom5.rbest.net.gz: mm39-referenced recip.best net to monDom5.
 - mm39.monDom5.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from mm39 to monDom5 through the recip.best net.

 - monDom5.mm39.rbest.net.gz: monDom5-referenced recip.best net.
 - monDom5.mm39.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.mm39.monDom5.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      monDom5.mm39.rbest.net.gz   2020-11-25 02:23   19M  
      monDom5.mm39.rbest.chain.gz 2020-11-25 02:23  9.2M  
      mm39.monDom5.rbest.net.gz   2020-11-25 02:23   15M  
      mm39.monDom5.rbest.chain.gz 2020-11-25 02:23  9.2M  
      md5sum.txt                  2020-11-25 02:23  244   
      axtRBestNet/                2021-03-15 15:28    -