This directory contains reciprocal-best netted chains for mm39-canFam6.
- mm39.canFam6.rbest.net.gz: mm39-referenced recip.best net to canFam6.
- mm39.canFam6.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from mm39 to canFam6 through the recip.best net.
- canFam6.mm39.rbest.net.gz: canFam6-referenced recip.best net.
- canFam6.mm39.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.mm39.canFam6.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
canFam6.mm39.rbest.net.gz 2021-05-18 19:53 116M
canFam6.mm39.rbest.chain.gz 2021-05-18 19:54 56M
mm39.canFam6.rbest.chain.gz 2021-05-18 19:55 56M
mm39.canFam6.rbest.net.gz 2021-05-18 19:56 84M
md5sum.txt 2021-05-18 19:56 244
axtRBestNet/ 2021-11-22 16:48 -