This directory contains reciprocal-best netted chains for mm10-papAnu3.
- mm10.papAnu3.rbest.net.gz: mm10-referenced recip.best net to papAnu3.
- mm10.papAnu3.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from mm10 to papAnu3 through the recip.best net.
- papAnu3.mm10.rbest.net.gz: papAnu3-referenced recip.best net.
- papAnu3.mm10.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.mm10.papAnu3.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-06-22 20:13 -
md5sum.txt 2017-06-22 09:36 244
mm10.papAnu3.rbest.chain.gz 2017-06-22 09:34 63M
mm10.papAnu3.rbest.net.gz 2017-06-22 09:36 90M
papAnu3.mm10.rbest.chain.gz 2017-06-22 09:33 64M
papAnu3.mm10.rbest.net.gz 2017-06-22 09:32 137M