This directory contains reciprocal-best netted chains for mm10-eulFla1.
- mm10.eulFla1.rbest.net.gz: mm10-referenced recip.best net to eulFla1.
- mm10.eulFla1.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from mm10 to eulFla1 through the recip.best net.
- eulFla1.mm10.rbest.net.gz: eulFla1-referenced recip.best net.
- eulFla1.mm10.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.mm10.eulFla1.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
mm10.eulFla1.rbest.net.gz 2017-10-04 20:04 95M
mm10.eulFla1.rbest.chain.gz 2017-10-04 20:03 64M
md5sum.txt 2017-10-04 20:04 244
eulFla1.mm10.rbest.net.gz 2017-10-04 20:00 138M
eulFla1.mm10.rbest.chain.gz 2017-10-04 20:02 64M
axtRBestNet/ 2017-10-05 01:29 -