This directory contains reciprocal-best netted chains for mm10-chrPic2.
- mm10.chrPic2.rbest.net.gz: mm10-referenced recip.best net to chrPic2.
- mm10.chrPic2.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from mm10 to chrPic2 through the recip.best net.
- chrPic2.mm10.rbest.net.gz: chrPic2-referenced recip.best net.
- chrPic2.mm10.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.mm10.chrPic2.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-04-06 15:58 -
md5sum.txt 2017-04-06 14:05 244
mm10.chrPic2.rbest.chain.gz 2017-04-06 14:04 7.2M
chrPic2.mm10.rbest.chain.gz 2017-04-06 14:04 7.2M
mm10.chrPic2.rbest.net.gz 2017-04-06 14:05 13M
chrPic2.mm10.rbest.net.gz 2017-04-06 14:04 14M