This directory contains the Nov. 2001 freeze of the mouse genome from the Mouse Genome Sequencing Consortium. This assembly was produced at the Sanger Center using the Phusion software developed by Jim Millikin and Zemin Ning, and was tied to the mouse fingerprint map by Tim Hubbard. chromAgp.zip - Description of how the assembly was generated drom fragments, unpacking to one file per chromosome. chromFa.zip - The working draft sequence chromosome in one file per chromosome. Repeats from RepeatMasker and Tandem Repeats Finder (with period of 12 or less) are in lower case while non-repeating sequence is in upper case. chromOut.zip - RepeatMasker .out file for chromosomes. These were done with RepeatMasker at the -s sensitive setting. contigAgp.zip - Description of how the working draft was generated from fragments at a contig layout level. contigOut.zip - RepeatMasker .out file for contigs. These were done with RepeatMasker at the -s sensitive setting.
Name Last modified Size Description
Parent Directory - chromAgp.zip 2002-03-15 13:25 12M chromFa.zip 2002-03-15 13:27 756M chromOut.zip 2002-03-15 13:27 131M database.zip 2002-03-28 07:15 513M