This directory contains reciprocal-best netted chains for melGal5-galGal6. - melGal5.galGal6.rbest.net.gz: melGal5-referenced recip.best net to galGal6. - melGal5.galGal6.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from melGal5 to galGal6 through the recip.best net. - galGal6.melGal5.rbest.net.gz: galGal6-referenced recip.best net. - galGal6.melGal5.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/melGal5.galGal6.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-26 10:41 - md5sum.txt 2018-10-26 04:54 256 melGal5.galGal6.rbest.chain.gz 2018-10-26 04:53 23M galGal6.melGal5.rbest.chain.gz 2018-10-26 04:53 23M melGal5.galGal6.rbest.net.gz 2018-10-26 04:54 33M galGal6.melGal5.rbest.net.gz 2018-10-26 04:53 42M