This directory contains reciprocal-best netted chains for hs1-mm10. - hs1.mm10.rbest.net.gz: hs1-referenced recip.best net to mm10. - hs1.mm10.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from hs1 to mm10 through the recip.best net. - mm10.hs1.rbest.net.gz: mm10-referenced recip.best net. - mm10.hs1.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.hs1.mm10.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2022-10-18 16:58 - hs1.mm10.rbest.chain.gz 2022-09-27 15:18 65M hs1.mm10.rbest.net.gz 2022-09-27 15:19 140M md5sum.txt 2022-09-27 15:20 228 mm10.hs1.rbest.chain.gz 2022-09-27 15:18 65M mm10.hs1.rbest.net.gz 2022-09-27 15:17 91M