This directory contains reciprocal-best netted chains for hg38-xenTro9.
- hg38.xenTro9.rbest.net.gz: hg38-referenced recip.best net to xenTro9.
- hg38.xenTro9.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from hg38 to xenTro9 through the recip.best net.
- xenTro9.hg38.rbest.net.gz: xenTro9-referenced recip.best net.
- xenTro9.hg38.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/hg38.xenTro9.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-03-30 21:40 -
hg38.xenTro9.rbest.chain.gz 2017-03-30 08:08 7.0M
hg38.xenTro9.rbest.net.gz 2017-03-30 08:08 12M
md5sum.txt 2017-03-30 08:08 244
xenTro9.hg38.rbest.chain.gz 2017-03-30 08:08 7.0M
xenTro9.hg38.rbest.net.gz 2017-03-30 08:08 12M