This directory contains reciprocal-best netted chains for hg38-rheMac8.
- hg38.rheMac8.rbest.net.gz: hg38-referenced recip.best net to rheMac8.
- hg38.rheMac8.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from hg38 to rheMac8 through the recip.best net.
- rheMac8.hg38.rbest.net.gz: rheMac8-referenced recip.best net.
- rheMac8.hg38.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/hg38.rheMac8.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
rheMac8.hg38.rbest.net.gz 2016-02-09 10:44 56M
rheMac8.hg38.rbest.chain.gz 2016-02-09 10:45 34M
hg38.rheMac8.rbest.chain.gz 2016-02-09 10:45 34M
hg38.rheMac8.rbest.net.gz 2016-02-09 10:46 60M
md5sum.txt 2016-02-09 10:46 244
axtRBestNet/ 2016-02-09 13:45 -