This directory contains reciprocal-best netted chains for hg38-ponAbe3. - hg38.ponAbe3.rbest.net.gz: hg38-referenced recip.best net to ponAbe3. - hg38.ponAbe3.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from hg38 to ponAbe3 through the recip.best net. - ponAbe3.hg38.rbest.net.gz: ponAbe3-referenced recip.best net. - ponAbe3.hg38.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/hg38.ponAbe3.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-03-26 17:43 - md5sum.txt 2018-03-26 15:40 244 hg38.ponAbe3.rbest.net.gz 2018-03-26 15:40 34M hg38.ponAbe3.rbest.chain.gz 2018-03-26 15:39 20M ponAbe3.hg38.rbest.chain.gz 2018-03-26 15:39 20M ponAbe3.hg38.rbest.net.gz 2018-03-26 15:39 33M