This directory contains reciprocal-best netted chains for hg38-bisBis1.
- hg38.bisBis1.rbest.net.gz: hg38-referenced recip.best net to bisBis1.
- hg38.bisBis1.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from hg38 to bisBis1 through the recip.best net.
- bisBis1.hg38.rbest.net.gz: bisBis1-referenced recip.best net.
- bisBis1.hg38.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/hg38.bisBis1.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-03-18 09:30 -
bisBis1.hg38.rbest.chain.gz 2017-03-17 23:50 77M
bisBis1.hg38.rbest.net.gz 2017-03-17 23:49 127M
hg38.bisBis1.rbest.chain.gz 2017-03-17 23:52 77M
hg38.bisBis1.rbest.net.gz 2017-03-17 23:57 151M
md5sum.txt 2017-03-17 23:57 244