This directory contains conservation soring by phyloP (phylogenetic p-values) for multiple alignments of 28 vertebrate genomes to the human genome, plus an alternate set of scores for the placental mammal subset of species in the alignments. Files in this directory are: vertebrate/*.wigFix.gz scores for all 28 species placental/*.wigFix.gz scores for placental subset (18 species) The multiple alignments and methods description are at: http://hgdownload.cse.ucsc.edu/goldenPath/hg18/multiz28way For more information about this data, see the track description for the Basewise Conserv track. The tree models used to generate this track are available at: htp://hgdownload.cse.ucsc.edu/goldenPath/hg18/phastCons28way/*.mod --------------------------------------------------------------- To download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so: ftp hgdownload.cse.ucsc.edu user name: anonymous password: <your email address> go to the directory goldenPath/hg18/phastCons28way To download multiple files from the UNIX command line, use the "mget" command. mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) Use the "prompt" command to toggle the interactive mode if you do not want to be prompted for each file that you download. --------------------------------------------------------------- All the files in this directory are freely available for public use. For data use restrictions regarding the genome assemblies used in this annotation, see http://genome.ucsc.edu/goldenPath/credits.html.
Name Last modified Size Description
Parent Directory - vertebrate/ 2008-11-26 10:05 - placental/ 2008-11-26 10:12 -