This directory contains a dump of the UCSC genome annotation database for the June 28, 2002 GenBank freeze assembled by NCBI. This is updated weekly on Sundays. The .txt.gz files are the database tables in a tab-delimited format compressed with gzip. The .sql files are the MySQL commands to create the tables. See http://genome.ucsc.edu/goldenPath/gbdDescriptions.html for descriptions of the tables. If you plan to download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so, ftp to hgarchive.cse.ucsc.edu, then go to the directory goldenPath/28jun2002/database. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) All of the tables in this directory are freely usable for any purpose except for the following: softberryGene.txt and softberryPep.txt - Free for academic and nonprofit use. Commercial users please contact Softberry Inc at http://www.softberry.com. genieAlt.txt and genieAltPep.txt - Free for academic and nonprofit use. See Affymetrix user agreement at http://genome.ucsc.edu/goldenPath/licenses/affyagreement.html. Commercial users please contact Affymetrix Inc. at http://www.affymetrix.com.
Name Last modified Size Description
Parent Directory - trackDb.txt.gz 2003-10-20 06:48 27K trackDb.sql 2003-10-20 06:48 1.2K spMrna.txt.gz 2003-08-06 21:42 189K spMrna.sql 2003-08-06 21:42 354 refSeqAll.txt.gz 2003-08-03 21:44 946K refSeqAll.sql 2003-08-03 21:44 1.3K genomicSuperDups.txt.gz 2003-06-24 13:18 2.4M genomicSuperDups.sql 2003-06-24 13:18 1.6K rnaGene.txt.gz 2003-05-30 09:43 5.9K rnaGene.sql 2003-05-30 09:43 746 perlegen.txt.gz 2003-05-21 13:05 118K perlegen.sql 2003-05-21 13:05 713 haplotype.txt.gz 2003-05-21 13:05 3.9K haplotype.sql 2003-05-21 13:05 715 snpTsc.txt.gz 2003-05-16 06:45 12M snpTsc.sql 2003-05-16 06:44 582 snpNih.txt.gz 2003-05-16 06:44 9.3M snpNih.sql 2003-05-16 06:44 582 slamNonCodingMouse.txt.gz 2003-04-28 20:15 6.0M slamNonCodingMouse.sql 2003-04-28 20:15 653 slamMouse.txt.gz 2003-04-28 20:15 1.6M slamMouse.sql 2003-04-28 20:15 742 chr15_random_rmsk.txt.gz 2003-03-14 09:02 19K chr15_random_rmsk.sql 2003-03-14 09:02 1.1K chr11_random_rmsk.txt.gz 2003-03-14 09:02 25K chr11_random_rmsk.sql 2003-03-14 09:02 1.1K chr10_rmsk.txt.gz 2003-03-14 09:01 5.6M chr10_rmsk.sql 2003-03-14 09:01 1.0K chrY_rmsk.txt.gz 2003-03-14 09:01 878K chrY_rmsk.sql 2003-03-14 09:01 1.0K chrX_random_rmsk.txt.gz 2003-03-14 09:01 37K chrX_random_rmsk.sql 2003-03-14 09:01 1.1K chrUn_random_rmsk.txt.gz 2003-03-14 09:01 46K chrUn_random_rmsk.sql 2003-03-14 09:01 1.1K chrX_rmsk.txt.gz 2003-03-14 09:01 6.1M chrX_rmsk.sql 2003-03-14 09:01 1.0K chrM_rmsk.txt.gz 2003-03-14 09:01 175 chrM_rmsk.sql 2003-03-14 09:01 1.0K chr9_random_rmsk.txt.gz 2003-03-14 09:01 6.6K chr9_random_rmsk.sql 2003-03-14 09:01 1.1K chr9_rmsk.txt.gz 2003-03-14 09:01 5.1M chr9_rmsk.sql 2003-03-14 09:01 1.0K chr8_random_rmsk.txt.gz 2003-03-14 09:01 18K chr8_random_rmsk.sql 2003-03-14 09:01 1.1K chr8_rmsk.txt.gz 2003-03-14 09:01 5.9M chr8_rmsk.sql 2003-03-14 09:01 1.0K chr7_rmsk.txt.gz 2003-03-14 09:01 6.6M chr7_rmsk.sql 2003-03-14 09:01 1.0K chr6_random_rmsk.txt.gz 2003-03-14 09:01 401K chr6_random_rmsk.sql 2003-03-14 09:01 1.1K chr6_rmsk.txt.gz 2003-03-14 09:01 6.8M chr6_rmsk.sql 2003-03-14 09:01 1.0K chr5_rmsk.txt.gz 2003-03-14 09:00 7.3M chr5_rmsk.sql 2003-03-14 09:00 1.0K chr4_random_rmsk.txt.gz 2003-03-14 09:00 20K chr4_random_rmsk.sql 2003-03-14 09:00 1.1K chr4_rmsk.txt.gz 2003-03-14 09:00 7.7M chr4_rmsk.sql 2003-03-14 09:00 1.0K chr3_rmsk.txt.gz 2003-03-14 09:00 8.1M chr3_rmsk.sql 2003-03-14 09:00 1.0K chr2_random_rmsk.txt.gz 2003-03-14 09:00 3.5K chr2_random_rmsk.sql 2003-03-14 09:00 1.1K chr2_rmsk.txt.gz 2003-03-14 09:00 9.8M chr2_rmsk.sql 2003-03-14 08:59 1.0K chr22_rmsk.txt.gz 2003-03-14 08:59 1.7M chr22_rmsk.sql 2003-03-14 08:59 1.0K chr21_rmsk.txt.gz 2003-03-14 08:59 1.4M chr21_rmsk.sql 2003-03-14 08:59 1.0K chr20_rmsk.txt.gz 2003-03-14 08:59 2.9M chr20_rmsk.sql 2003-03-14 08:59 1.0K chr19_random_rmsk.txt.gz 2003-03-14 08:59 23K chr19_random_rmsk.sql 2003-03-14 08:59 1.1K chr1_rmsk.txt.gz 2003-03-14 08:59 10M chr1_rmsk.sql 2003-03-14 08:59 1.0K chr19_rmsk.txt.gz 2003-03-14 08:59 3.1M chr19_rmsk.sql 2003-03-14 08:59 1.0K chr18_rmsk.txt.gz 2003-03-14 08:59 2.9M chr18_rmsk.sql 2003-03-14 08:59 1.0K chr17_random_rmsk.txt.gz 2003-03-14 08:59 28K chr17_random_rmsk.sql 2003-03-14 08:59 1.1K chr17_rmsk.txt.gz 2003-03-14 08:59 3.7M chr17_rmsk.sql 2003-03-14 08:59 1.0K chr16_random_rmsk.txt.gz 2003-03-14 08:59 19K chr16_random_rmsk.sql 2003-03-14 08:59 1.1K chr16_rmsk.txt.gz 2003-03-14 08:59 4.0M chr16_rmsk.sql 2003-03-14 08:59 1.0K chr15_rmsk.txt.gz 2003-03-14 08:58 3.5M chr15_rmsk.sql 2003-03-14 08:58 1.0K chr14_rmsk.txt.gz 2003-03-14 08:58 3.8M chr14_rmsk.sql 2003-03-14 08:58 1.0K chr13_rmsk.txt.gz 2003-03-14 08:58 3.8M chr13_rmsk.sql 2003-03-14 08:58 1.0K chr12_random_rmsk.txt.gz 2003-03-14 08:58 11K chr12_random_rmsk.sql 2003-03-14 08:58 1.1K chr12_rmsk.txt.gz 2003-03-14 08:58 5.7M chr12_rmsk.sql 2003-03-14 08:58 1.0K chr11_rmsk.txt.gz 2003-03-14 08:58 5.7M chr11_rmsk.sql 2003-03-14 08:57 1.0K dbtssAli.txt.gz 2003-02-24 07:16 586K dbtssAli.sql 2003-02-24 07:16 1.3K genMapDb.txt.gz 2003-02-18 10:07 44K genMapDb.sql 2003-02-18 10:07 1.1K extFile.txt.gz 2003-02-10 12:39 766 extFile.sql 2003-02-10 12:39 438 chromInfo.txt.gz 2003-02-10 12:39 450 chromInfo.sql 2003-02-10 12:39 392 axtInfo.txt.gz 2003-02-10 12:39 466 axtInfo.sql 2003-02-10 12:39 444 clonePos.txt.gz 2003-02-10 12:39 460K clonePos.sql 2003-02-10 12:39 692 superfamily.txt.gz 2003-02-06 15:03 177K superfamily.sql 2003-02-06 15:03 592 sgpPep.txt.gz 2003-02-06 15:02 7.2M sgpPep.sql 2003-02-06 15:02 318 sgpGene.txt.gz 2003-02-06 15:02 2.3M sgpGene.sql 2003-02-06 15:02 738 sfDescription.txt.gz 2003-02-06 15:02 152K sfDescription.sql 2003-02-06 15:02 418 mrnaRefseq.txt.gz 2003-02-06 15:02 876K mrnaRefseq.sql 2003-02-06 15:02 357 knownGenePep.txt.gz 2003-02-06 15:02 12M knownGenePep.sql 2003-02-06 15:02 330 knownGeneMrna.txt.gz 2003-02-06 15:01 36M knownGeneMrna.sql 2003-02-06 15:01 332 knownGeneLink.txt.gz 2003-02-06 15:01 1.9K knownGeneLink.sql 2003-02-06 15:01 420 knownGene.txt.gz 2003-02-06 15:01 2.6M knownGene.sql 2003-02-06 15:01 889 ensemblXref.txt.gz 2003-02-06 15:00 2.8M grp.txt.gz 2003-02-06 15:00 192 grp.sql 2003-02-06 15:00 364 ensemblXref.sql 2003-02-06 15:00 900 dupSpMrna.txt.gz 2003-02-06 15:00 52K dupSpMrna.sql 2003-02-06 15:00 515 tigrGeneIndex.txt.gz 2002-12-20 15:41 8.1M tigrGeneIndex.sql 2002-12-20 15:41 743 cytoBand.txt.gz 2002-12-20 15:41 6.1K cytoBand.sql 2002-12-20 15:41 532 refGene.txt.gz 2002-12-09 14:10 1.4M refGene.sql 2002-12-09 14:10 737 blatChimp.txt.gz 2002-12-08 05:03 327K blatChimp.sql 2002-12-08 05:03 1.2K geneidPep.txt.gz 2002-12-02 12:47 7.0M geneidPep.sql 2002-12-02 12:47 317 geneid.txt.gz 2002-12-02 12:47 2.0M geneid.sql 2002-12-02 12:47 729 chrY_blastzTightMouse.txt.gz 2002-11-19 05:57 79K chrY_blastzTightMouse.sql 2002-11-19 05:57 1.3K chrX_random_blastzTightMouse.txt.gz 2002-11-19 05:57 10K chrX_random_blastzTightMouse.sql 2002-11-19 05:57 1.3K chrX_blastzTightMouse.txt.gz 2002-11-19 05:57 1.7M chrX_blastzTightMouse.sql 2002-11-19 05:57 1.3K chrUn_random_blastzTightMouse.txt.gz 2002-11-19 05:57 5.0K chrUn_random_blastzTightMouse.sql 2002-11-19 05:57 1.3K chrM_blastzTightMouse.txt.gz 2002-11-19 05:57 661 chrM_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr9_random_blastzTightMouse.txt.gz 2002-11-19 05:57 613 chr9_random_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr9_blastzTightMouse.txt.gz 2002-11-19 05:57 1.3M chr9_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr8_random_blastzTightMouse.txt.gz 2002-11-19 05:57 1.7K chr8_random_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr8_blastzTightMouse.txt.gz 2002-11-19 05:57 1.3M chr8_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr7_blastzTightMouse.txt.gz 2002-11-19 05:57 1.6M chr7_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr6_random_blastzTightMouse.txt.gz 2002-11-19 05:57 117K chr6_random_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr6_blastzTightMouse.txt.gz 2002-11-19 05:57 1.7M chr6_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr5_blastzTightMouse.txt.gz 2002-11-19 05:57 2.0M chr5_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr4_random_blastzTightMouse.txt.gz 2002-11-19 05:57 1.9K chr4_random_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr4_blastzTightMouse.txt.gz 2002-11-19 05:57 1.7M chr4_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr3_blastzTightMouse.txt.gz 2002-11-19 05:57 2.2M chr3_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr2_random_blastzTightMouse.txt.gz 2002-11-19 05:57 533 chr2_random_blastzTightMouse.sql 2002-11-19 05:57 1.3K chr2_blastzTightMouse.txt.gz 2002-11-19 05:56 2.7M chr2_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr22_blastzTightMouse.txt.gz 2002-11-19 05:56 334K chr22_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr21_blastzTightMouse.txt.gz 2002-11-19 05:56 271K chr21_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr20_blastzTightMouse.txt.gz 2002-11-19 05:56 682K chr20_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr1_blastzTightMouse.txt.gz 2002-11-19 05:56 2.8M chr1_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr19_random_blastzTightMouse.txt.gz 2002-11-19 05:56 3.5K chr19_random_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr19_blastzTightMouse.txt.gz 2002-11-19 05:56 557K chr19_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr18_blastzTightMouse.txt.gz 2002-11-19 05:56 731K chr18_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr17_random_blastzTightMouse.txt.gz 2002-11-19 05:56 4.4K chr17_random_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr17_blastzTightMouse.txt.gz 2002-11-19 05:56 1.1M chr17_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr16_random_blastzTightMouse.txt.gz 2002-11-19 05:56 4.9K chr16_random_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr16_blastzTightMouse.txt.gz 2002-11-19 05:56 960K chr16_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr15_random_blastzTightMouse.txt.gz 2002-11-19 05:56 1.7K chr15_random_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr15_blastzTightMouse.txt.gz 2002-11-19 05:56 1.0M chr15_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr14_blastzTightMouse.txt.gz 2002-11-19 05:56 1.0M chr14_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr13_blastzTightMouse.txt.gz 2002-11-19 05:56 905K chr13_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr12_random_blastzTightMouse.txt.gz 2002-11-19 05:56 1.2K chr12_random_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr12_blastzTightMouse.txt.gz 2002-11-19 05:56 1.4M chr12_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr11_random_blastzTightMouse.txt.gz 2002-11-19 05:56 11K chr11_random_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr11_blastzTightMouse.txt.gz 2002-11-19 05:56 1.6M chr11_blastzTightMouse.sql 2002-11-19 05:56 1.3K chr10_blastzTightMouse.txt.gz 2002-11-19 05:56 1.4M chr10_blastzTightMouse.sql 2002-11-19 05:56 1.3K affyTranscriptome.txt.gz 2002-11-19 05:56 15M affyTranscriptome.sql 2002-11-19 05:56 729 zoom2_affyTranscriptome.txt.gz 2002-11-19 05:56 637K zoom2_affyTranscriptome.sql 2002-11-19 05:56 741 zoom1_affyTranscriptome.txt.gz 2002-11-19 05:55 98K zoom1_affyTranscriptome.sql 2002-11-19 05:55 741 stsInfo2.txt.gz 2002-11-03 08:58 8.0M stsInfo2.sql 2002-11-03 08:58 2.1K recombRate.txt.gz 2002-11-03 08:58 88K recombRate.sql 2002-11-03 08:58 871 chrY_blastzMm2.txt.gz 2002-11-03 08:57 11M chrY_blastzMm2.sql 2002-11-03 08:57 1.3K chrX_random_blastzMm2.txt.gz 2002-11-03 08:57 72K chrX_random_blastzMm2.sql 2002-11-03 08:57 1.3K chrX_blastzMm2.txt.gz 2002-11-03 08:57 30M chrX_blastzMm2.sql 2002-11-03 08:57 1.3K chrUn_random_blastzMm2.txt.gz 2002-11-03 08:57 1.9M chrUn_random_blastzMm2.sql 2002-11-03 08:57 1.3K chrM_blastzMm2.txt.gz 2002-11-03 08:57 12K chrM_blastzMm2.sql 2002-11-03 08:57 1.3K chr9_random_blastzMm2.txt.gz 2002-11-03 08:56 4.2K chr9_random_blastzMm2.sql 2002-11-03 08:56 1.3K chr9_blastzMm2.txt.gz 2002-11-03 08:56 39M chr9_blastzMm2.sql 2002-11-03 08:56 1.3K chr8_random_blastzMm2.txt.gz 2002-11-03 08:55 1.6M chr8_random_blastzMm2.sql 2002-11-03 08:55 1.3K chr8_blastzMm2.txt.gz 2002-11-03 08:55 34M chr8_blastzMm2.sql 2002-11-03 08:55 1.3K chr7_blastzMm2.txt.gz 2002-11-03 08:53 72M chr7_blastzMm2.sql 2002-11-03 08:53 1.3K chr6_random_blastzMm2.txt.gz 2002-11-03 08:52 9.9M chr6_random_blastzMm2.sql 2002-11-03 08:52 1.3K chr6_blastzMm2.txt.gz 2002-11-03 08:50 37M chr6_blastzMm2.sql 2002-11-03 08:50 1.3K chr5_blastzMm2.txt.gz 2002-11-03 08:49 38M chr5_blastzMm2.sql 2002-11-03 08:49 1.3K chr4_random_blastzMm2.txt.gz 2002-11-03 08:48 25K chr4_random_blastzMm2.sql 2002-11-03 08:48 1.3K chr4_blastzMm2.txt.gz 2002-11-03 08:46 34M chr4_blastzMm2.sql 2002-11-03 08:46 1.3K chr3_blastzMm2.txt.gz 2002-11-03 08:45 45M chr3_blastzMm2.sql 2002-11-03 08:45 1.3K chr2_random_blastzMm2.txt.gz 2002-11-03 08:44 2.8K chr2_random_blastzMm2.sql 2002-11-03 08:44 1.3K chr2_blastzMm2.txt.gz 2002-11-03 08:42 40M chr2_blastzMm2.sql 2002-11-03 08:42 1.3K chr22_blastzMm2.txt.gz 2002-11-03 08:42 7.7M chr22_blastzMm2.sql 2002-11-03 08:42 1.3K chr21_blastzMm2.txt.gz 2002-11-03 08:41 8.7M chr21_blastzMm2.sql 2002-11-03 08:41 1.3K chr20_blastzMm2.txt.gz 2002-11-03 08:40 14M chr20_blastzMm2.sql 2002-11-03 08:40 1.3K chr1_blastzMm2.txt.gz 2002-11-03 08:38 56M chr1_blastzMm2.sql 2002-11-03 08:38 1.3K chr19_random_blastzMm2.txt.gz 2002-11-03 08:37 32K chr19_random_blastzMm2.sql 2002-11-03 08:37 1.3K chr19_blastzMm2.txt.gz 2002-11-03 08:37 418M chr19_blastzMm2.sql 2002-11-03 08:37 1.3K chr18_blastzMm2.txt.gz 2002-11-03 08:34 14M chr18_blastzMm2.sql 2002-11-03 08:34 1.3K chr17_random_blastzMm2.txt.gz 2002-11-03 08:34 83K chr17_random_blastzMm2.sql 2002-11-03 08:34 1.3K chr17_blastzMm2.txt.gz 2002-11-03 08:33 26M chr17_blastzMm2.sql 2002-11-03 08:33 1.3K chr16_random_blastzMm2.txt.gz 2002-11-03 08:33 29K chr16_random_blastzMm2.sql 2002-11-03 08:33 1.3K chr16_blastzMm2.txt.gz 2002-11-03 08:32 25M chr16_blastzMm2.sql 2002-11-03 08:32 1.3K chr15_random_blastzMm2.txt.gz 2002-11-03 08:32 1.3M chr15_random_blastzMm2.sql 2002-11-03 08:32 1.3K chr15_blastzMm2.txt.gz 2002-11-03 08:32 15M chr15_blastzMm2.sql 2002-11-03 08:32 1.3K chr14_blastzMm2.txt.gz 2002-11-03 08:31 17M chr14_blastzMm2.sql 2002-11-03 08:31 1.3K chr13_blastzMm2.txt.gz 2002-11-03 08:31 13M chr13_blastzMm2.sql 2002-11-03 08:31 1.3K chr12_random_blastzMm2.txt.gz 2002-11-03 08:31 9.8K chr12_random_blastzMm2.sql 2002-11-03 08:31 1.3K chr12_blastzMm2.txt.gz 2002-11-03 08:30 29M chr12_blastzMm2.sql 2002-11-03 08:30 1.3K chr11_random_blastzMm2.txt.gz 2002-11-03 08:29 93K chr11_random_blastzMm2.sql 2002-11-03 08:29 1.3K chr11_blastzMm2.txt.gz 2002-11-03 08:28 64M chr11_blastzMm2.sql 2002-11-03 08:28 1.3K chr10_blastzMm2.txt.gz 2002-11-03 08:27 39M chr10_blastzMm2.sql 2002-11-03 08:27 1.3K chimpBac.txt.gz 2002-11-03 08:25 1.9M chimpBac.sql 2002-11-03 08:25 1.3K stsMap.txt.gz 2002-11-03 08:25 2.9M stsMap.sql 2002-11-03 08:25 1.5K sanger22pseudo.txt.gz 2002-10-06 06:43 6.6K sanger22pseudo.sql 2002-10-06 06:43 745 sanger22pep.txt.gz 2002-10-06 06:43 128K sanger22pep.sql 2002-10-06 06:43 321 sanger22.txt.gz 2002-10-06 06:43 43K sanger22.sql 2002-10-06 06:43 733 geneBands.txt.gz 2002-10-06 06:43 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