This directory contains reciprocal-best netted chains for gorGor5-panTro5. - gorGor5.panTro5.rbest.net.gz: gorGor5-referenced recip.best net to panTro5. - gorGor5.panTro5.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from gorGor5 to panTro5 through the recip.best net. - panTro5.gorGor5.rbest.net.gz: panTro5-referenced recip.best net. - panTro5.gorGor5.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/gorGor5.panTro5.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2016-08-08 12:46 - md5sum.txt 2016-08-08 10:49 256 panTro5.gorGor5.rbest.chain.gz 2016-08-08 10:48 18M gorGor5.panTro5.rbest.chain.gz 2016-08-08 10:49 18M gorGor5.panTro5.rbest.net.gz 2016-08-08 10:49 25M panTro5.gorGor5.rbest.net.gz 2016-08-08 10:48 39M