This directory contains reciprocal-best netted chains for gorGor5-panPan2. - gorGor5.panPan2.rbest.net.gz: gorGor5-referenced recip.best net to panPan2. - gorGor5.panPan2.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from gorGor5 to panPan2 through the recip.best net. - panPan2.gorGor5.rbest.net.gz: panPan2-referenced recip.best net. - panPan2.gorGor5.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/gorGor5.panPan2.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-02-01 21:26 - gorGor5.panPan2.rbest.chain.gz 2017-02-01 19:35 18M gorGor5.panPan2.rbest.net.gz 2017-02-01 19:36 27M md5sum.txt 2017-02-01 19:36 256 panPan2.gorGor5.rbest.chain.gz 2017-02-01 19:35 18M panPan2.gorGor5.rbest.net.gz 2017-02-01 19:35 35M