This directory contains reciprocal-best netted chains for gorGor4-hg38. - gorGor4.hg38.rbest.net.gz: gorGor4-referenced recip.best net to hg38. - gorGor4.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from gorGor4 to hg38 through the recip.best net. - hg38.gorGor4.rbest.net.gz: hg38-referenced recip.best net. - hg38.gorGor4.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/gorGor4.hg38.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2016-01-07 15:23 - gorGor4.hg38.rbest.chain.gz 2016-01-07 14:40 13M gorGor4.hg38.rbest.net.gz 2016-01-07 14:40 21M hg38.gorGor4.rbest.chain.gz 2016-01-07 14:40 13M hg38.gorGor4.rbest.net.gz 2016-01-07 14:39 22M md5sum.txt 2016-01-07 14:40 244