This directory contains reciprocal-best netted chains for galVar1-cavPor3.

 - galVar1.cavPor3.rbest.net.gz: galVar1-referenced recip.best net to cavPor3.
 - galVar1.cavPor3.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from galVar1 to cavPor3 through the recip.best net.

 - cavPor3.galVar1.rbest.net.gz: cavPor3-referenced recip.best net.
 - cavPor3.galVar1.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/galVar1.cavPor3.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                           Last modified      Size  Description
      Parent Directory                                    -   
      axtRBestNet/                   2016-08-15 09:56    -   
      md5sum.txt                     2016-04-20 10:33  256   
      cavPor3.galVar1.rbest.chain.gz 2016-04-20 10:31   81M  
      galVar1.cavPor3.rbest.chain.gz 2016-04-20 10:32   82M  
      cavPor3.galVar1.rbest.net.gz   2016-04-20 10:30  116M  
      galVar1.cavPor3.rbest.net.gz   2016-04-20 10:33  181M