This directory contains reciprocal-best netted chains for galGal6-merNub1. - galGal6.merNub1.rbest.net.gz: galGal6-referenced recip.best net to merNub1. - galGal6.merNub1.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal6 to merNub1 through the recip.best net. - merNub1.galGal6.rbest.net.gz: merNub1-referenced recip.best net. - merNub1.galGal6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal6.merNub1.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-20 19:31 - galGal6.merNub1.rbest.chain.gz 2018-10-20 11:56 44M galGal6.merNub1.rbest.net.gz 2018-10-20 11:57 68M md5sum.txt 2018-10-20 11:57 256 merNub1.galGal6.rbest.chain.gz 2018-10-20 11:55 44M merNub1.galGal6.rbest.net.gz 2018-10-20 11:55 79M