This directory contains reciprocal-best netted chains for galGal6-colStr1. - galGal6.colStr1.rbest.net.gz: galGal6-referenced recip.best net to colStr1. - galGal6.colStr1.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal6 to colStr1 through the recip.best net. - colStr1.galGal6.rbest.net.gz: colStr1-referenced recip.best net. - colStr1.galGal6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal6.colStr1.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - md5sum.txt 2018-10-19 00:24 256 galGal6.colStr1.rbest.net.gz 2018-10-19 00:24 71M galGal6.colStr1.rbest.chain.gz 2018-10-19 00:23 45M colStr1.galGal6.rbest.net.gz 2018-10-19 00:21 79M colStr1.galGal6.rbest.chain.gz 2018-10-19 00:22 45M axtRBestNet/ 2018-10-19 07:38 -