This directory contains reciprocal-best netted chains for galGal6-chaVoc2. - galGal6.chaVoc2.rbest.net.gz: galGal6-referenced recip.best net to chaVoc2. - galGal6.chaVoc2.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal6 to chaVoc2 through the recip.best net. - chaVoc2.galGal6.rbest.net.gz: chaVoc2-referenced recip.best net. - chaVoc2.galGal6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal6.chaVoc2.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-18 15:12 - md5sum.txt 2018-10-18 11:16 256 galGal6.chaVoc2.rbest.chain.gz 2018-10-18 11:16 40M chaVoc2.galGal6.rbest.chain.gz 2018-10-18 11:15 41M galGal6.chaVoc2.rbest.net.gz 2018-10-18 11:16 57M chaVoc2.galGal6.rbest.net.gz 2018-10-18 11:14 82M