This directory contains reciprocal-best netted chains for equCab3-hg38.

 - equCab3.hg38.rbest.net.gz: equCab3-referenced recip.best net to hg38.
 - equCab3.hg38.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from equCab3 to hg38 through the recip.best net.

 - hg38.equCab3.rbest.net.gz: hg38-referenced recip.best net.
 - hg38.equCab3.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/equCab3.hg38.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      axtRBestNet/                2019-07-23 15:33    -   
      md5sum.txt                  2018-06-06 12:52  244   
      equCab3.hg38.rbest.chain.gz 2018-06-06 12:50   77M  
      hg38.equCab3.rbest.chain.gz 2018-06-06 12:49   77M  
      equCab3.hg38.rbest.net.gz   2018-06-06 12:52  130M  
      hg38.equCab3.rbest.net.gz   2018-06-06 12:47  138M