This directory contains reciprocal-best netted chains for equCab2-hg38.

 - equCab2.hg38.rbest.net.gz: equCab2-referenced recip.best net to hg38.
 - equCab2.hg38.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from equCab2 to hg38 through the recip.best net.

 - hg38.equCab2.rbest.net.gz: hg38-referenced recip.best net.
 - hg38.equCab2.rbest.chain.gz: recip.best "liftOver" chains.

 - directory axtRBestNet/ - reciprocal best alignments in axt file format
   http://genome.ucsc.edu/goldenPath/help/axt.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      axtRBestNet/                2015-04-24 16:36    -   
      md5sum.txt                  2015-04-24 15:59  244   
      equCab2.hg38.rbest.net.gz   2015-04-24 15:59  129M  
      equCab2.hg38.rbest.chain.gz 2015-04-24 15:57   77M  
      hg38.equCab2.rbest.chain.gz 2015-04-24 15:56   77M  
      hg38.equCab2.rbest.net.gz   2015-04-24 15:55  137M