This directory contains the Drosophila persimilis 28 October 2005 assembly
from the Broad Institute at MIT and Harvard. The annotations are from
UCSC and collaborators worldwide.
Files are updated nightly. The .txt.gz files contain the
database tables in a tab-delimited format compressed with gzip.
The .sql files contain the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droPer1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
If you plan to download a large file or multiple files from
this directory, we recommend that you use ftp rather than
downloading the files via our website. To do so, ftp to
hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droPer1/database. To download multiple files,
use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the tables in this directory are freely usable for any
purpose.
Name Last modified Size Description
Parent Directory -
bigFiles.txt.gz 2024-11-17 03:25 73
ncbiRefSeqOther.txt.gz 2018-02-09 14:05 75
extNcbiRefSeq.txt.gz 2018-02-09 14:05 90
grp.txt.gz 2014-03-02 03:40 222
history.txt.gz 2006-01-06 05:55 233
genscanPep.sql 2013-10-01 12:48 330
chromInfo.sql 2013-10-01 12:48 396
history.sql 2013-10-01 12:48 537
gap.sql 2013-10-01 12:48 722
genscan.sql 2013-10-01 12:48 748
gold.sql 2013-10-01 12:48 799
hgFindSpec.txt.gz 2023-12-05 13:51 891
gc5Base.sql 2013-10-01 12:48 892
rmsk.sql 2013-10-01 12:48 1.0K
simpleRepeat.sql 2013-10-01 12:48 1.1K
ncbiRefSeqOther.sql 2018-02-09 14:05 1.3K
blastDm2FB.sql 2013-10-01 12:48 1.3K
ncbiRefSeqCds.sql 2018-02-09 14:05 1.4K
grp.sql 2014-03-02 03:40 1.4K
bigFiles.sql 2024-11-17 03:25 1.4K
ncbiRefSeqPepTable.sql 2018-02-09 14:05 1.4K
chromAlias.sql 2018-02-18 06:18 1.4K
tableDescriptions.sql 2024-11-16 02:03 1.4K
ucscToRefSeq.sql 2018-02-18 06:18 1.4K
extNcbiRefSeq.sql 2018-02-09 14:05 1.5K
microsat.sql 2015-08-23 15:04 1.5K
chainDm6Link.sql 2014-12-14 12:46 1.5K
tableList.sql 2024-11-17 03:25 1.6K
seqNcbiRefSeq.sql 2018-02-09 14:05 1.6K
gbLoaded.sql 2020-08-19 02:47 1.6K
chainDm6.sql 2014-12-14 12:46 1.7K
xenoRefFlat.sql 2020-08-19 02:47 1.7K
hgFindSpec.sql 2023-12-05 13:51 1.8K
augustusGene.sql 2015-07-26 12:49 1.9K
ncbiRefSeq.sql 2018-02-09 13:35 2.0K
xenoRefGene.sql 2020-08-19 02:47 2.0K
ncbiRefSeqPredicted.sql 2018-02-09 13:35 2.0K
ncbiRefSeqLink.sql 2018-02-09 13:35 2.0K
trackDb.sql 2023-12-05 13:51 2.1K
netDm6.sql 2014-12-14 12:47 2.1K
xenoMrna.sql 2016-02-21 14:32 2.1K
ncbiRefSeqPsl.sql 2018-02-09 13:36 2.1K
xenoRefSeqAli.sql 2020-08-19 02:47 2.1K
tableList.txt.gz 2024-11-17 03:25 2.3K
tableDescriptions.txt.gz 2024-11-16 02:03 5.4K
microsat.txt.gz 2015-08-23 15:04 11K
trackDb.txt.gz 2023-12-05 13:51 19K
gbLoaded.txt.gz 2020-08-19 02:47 31K
chromInfo.txt.gz 2006-01-06 05:54 45K
ucscToRefSeq.txt.gz 2018-02-18 06:18 78K
ncbiRefSeqCds.txt.gz 2018-02-09 14:05 79K
chromAlias.txt.gz 2018-02-18 06:18 117K
gap.txt.gz 2006-01-06 05:54 170K
seqNcbiRefSeq.txt.gz 2018-02-09 14:05 247K
gold.txt.gz 2006-01-06 05:55 299K
ncbiRefSeqLink.txt.gz 2018-02-09 13:35 500K
ncbiRefSeq.txt.gz 2018-02-09 13:35 716K
ncbiRefSeqPredicted.txt.gz 2018-02-09 13:35 716K
augustusGene.txt.gz 2015-07-26 12:49 836K
ncbiRefSeqPsl.txt.gz 2018-02-09 13:36 839K
genscan.txt.gz 2006-01-06 05:54 887K
gc5Base.txt.gz 2006-01-06 05:54 940K
blastDm2FB.txt.gz 2006-01-06 05:52 1.4M
simpleRepeat.txt.gz 2006-01-06 05:55 1.9M
rmsk.txt.gz 2006-01-06 05:55 3.5M
ncbiRefSeqPepTable.txt.gz 2018-02-09 14:05 4.0M
genscanPep.txt.gz 2006-01-06 05:55 5.4M
chainDm6.txt.gz 2014-12-14 12:46 6.7M
netDm6.txt.gz 2014-12-14 12:47 7.8M
xenoRefFlat.txt.gz 2020-08-19 02:47 12M
xenoRefGene.txt.gz 2020-08-19 02:47 13M
xenoRefSeqAli.txt.gz 2020-08-19 02:47 14M
chainDm6Link.txt.gz 2014-12-14 12:46 60M
xenoMrna.txt.gz 2016-02-21 14:32 110M