This directory contains the Drosophila persimilis 28 October 2005 assembly
from the Broad Institute at MIT and Harvard. The annotations are from
UCSC and collaborators worldwide.
Files are updated nightly. The .txt.gz files contain the
database tables in a tab-delimited format compressed with gzip.
The .sql files contain the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droPer1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
If you plan to download a large file or multiple files from
this directory, we recommend that you use ftp rather than
downloading the files via our website. To do so, ftp to
hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droPer1/database. To download multiple files,
use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the tables in this directory are freely usable for any
purpose.
Name Last modified Size Description
Parent Directory -
xenoRefSeqAli.txt.gz 2020-08-19 02:47 14M
xenoRefSeqAli.sql 2020-08-19 02:47 2.1K
xenoRefGene.txt.gz 2020-08-19 02:47 13M
xenoRefGene.sql 2020-08-19 02:47 2.0K
xenoRefFlat.txt.gz 2020-08-19 02:47 12M
xenoRefFlat.sql 2020-08-19 02:47 1.7K
xenoMrna.txt.gz 2016-02-21 14:32 110M
xenoMrna.sql 2016-02-21 14:32 2.1K
ucscToRefSeq.txt.gz 2018-02-18 06:18 78K
ucscToRefSeq.sql 2018-02-18 06:18 1.4K
trackDb.txt.gz 2023-12-05 13:51 19K
trackDb.sql 2023-12-05 13:51 2.1K
tableList.txt.gz 2024-11-17 03:25 2.3K
tableList.sql 2024-11-17 03:25 1.6K
tableDescriptions.txt.gz 2024-11-16 02:03 5.4K
tableDescriptions.sql 2024-11-16 02:03 1.4K
simpleRepeat.txt.gz 2006-01-06 05:55 1.9M
simpleRepeat.sql 2013-10-01 12:48 1.1K
seqNcbiRefSeq.txt.gz 2018-02-09 14:05 247K
seqNcbiRefSeq.sql 2018-02-09 14:05 1.6K
rmsk.txt.gz 2006-01-06 05:55 3.5M
rmsk.sql 2013-10-01 12:48 1.0K
netDm6.txt.gz 2014-12-14 12:47 7.8M
netDm6.sql 2014-12-14 12:47 2.1K
ncbiRefSeqPsl.txt.gz 2018-02-09 13:36 839K
ncbiRefSeqPsl.sql 2018-02-09 13:36 2.1K
ncbiRefSeqPredicted.txt.gz 2018-02-09 13:35 716K
ncbiRefSeqPredicted.sql 2018-02-09 13:35 2.0K
ncbiRefSeqPepTable.txt.gz 2018-02-09 14:05 4.0M
ncbiRefSeqPepTable.sql 2018-02-09 14:05 1.4K
ncbiRefSeqOther.txt.gz 2018-02-09 14:05 75
ncbiRefSeqOther.sql 2018-02-09 14:05 1.3K
ncbiRefSeqLink.txt.gz 2018-02-09 13:35 500K
ncbiRefSeqLink.sql 2018-02-09 13:35 2.0K
ncbiRefSeqCds.txt.gz 2018-02-09 14:05 79K
ncbiRefSeqCds.sql 2018-02-09 14:05 1.4K
ncbiRefSeq.txt.gz 2018-02-09 13:35 716K
ncbiRefSeq.sql 2018-02-09 13:35 2.0K
microsat.txt.gz 2015-08-23 15:04 11K
microsat.sql 2015-08-23 15:04 1.5K
history.txt.gz 2006-01-06 05:55 233
history.sql 2013-10-01 12:48 537
hgFindSpec.txt.gz 2023-12-05 13:51 891
hgFindSpec.sql 2023-12-05 13:51 1.8K
grp.txt.gz 2014-03-02 03:40 222
grp.sql 2014-03-02 03:40 1.4K
gold.txt.gz 2006-01-06 05:55 299K
gold.sql 2013-10-01 12:48 799
genscanPep.txt.gz 2006-01-06 05:55 5.4M
genscanPep.sql 2013-10-01 12:48 330
genscan.txt.gz 2006-01-06 05:54 887K
genscan.sql 2013-10-01 12:48 748
gc5Base.txt.gz 2006-01-06 05:54 940K
gc5Base.sql 2013-10-01 12:48 892
gbLoaded.txt.gz 2020-08-19 02:47 31K
gbLoaded.sql 2020-08-19 02:47 1.6K
gap.txt.gz 2006-01-06 05:54 170K
gap.sql 2013-10-01 12:48 722
extNcbiRefSeq.txt.gz 2018-02-09 14:05 90
extNcbiRefSeq.sql 2018-02-09 14:05 1.5K
chromInfo.txt.gz 2006-01-06 05:54 45K
chromInfo.sql 2013-10-01 12:48 396
chromAlias.txt.gz 2018-02-18 06:18 117K
chromAlias.sql 2018-02-18 06:18 1.4K
chainDm6Link.txt.gz 2014-12-14 12:46 60M
chainDm6Link.sql 2014-12-14 12:46 1.5K
chainDm6.txt.gz 2014-12-14 12:46 6.7M
chainDm6.sql 2014-12-14 12:46 1.7K
blastDm2FB.txt.gz 2006-01-06 05:52 1.4M
blastDm2FB.sql 2013-10-01 12:48 1.3K
bigFiles.txt.gz 2024-11-17 03:25 73
bigFiles.sql 2024-11-17 03:25 1.4K
augustusGene.txt.gz 2015-07-26 12:49 836K
augustusGene.sql 2015-07-26 12:49 1.9K