This directory contains the Aug. 2003 Drosophila pseudoobscura 
Freeze 1 assembly (dp2) from the Baylor College of Medicine HGSC 
Drosophila Genome Project. The annotations were contributed by
UCSC and collaborators worldwide.

Files included in this directory (updated nightly):

  - *.sql files: the MySQL commands used to create the tables.
    To see descriptions of the tables underlying Genome Browser annotation
    tracks, select the table in the Table Browser:
      http://genome.ucsc.edu/cgi-bin/hgTables?db=dp2
    and click the "describe table schema" button.  There is also a "view
    table schema" link on the configuration page for each track.

  - *.txt.gz files: the database tables in a tab-delimited format 
    compressed with gzip. 

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If you plan to download a large file or multiple files from this 
directory, we recommend you use ftp rather than downloading the 
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then 
go to the directory goldenPath/dp2/database/. To download multiple files, 
use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

All the annotations in this directory are freely available for public use.

      Name                        Last modified      Size  Description
Parent Directory - xenoRefSeqAli.txt.gz 2020-08-21 13:08 13M xenoRefSeqAli.sql 2020-08-21 13:08 2.1K xenoRefGene.txt.gz 2020-08-21 13:08 13M xenoRefGene.sql 2020-08-21 13:08 1.9K xenoRefFlat.txt.gz 2020-08-21 13:08 12M xenoRefFlat.sql 2020-08-21 13:08 1.7K xenoMrna.txt.gz 2016-02-21 13:45 109M xenoMrna.sql 2016-02-21 13:45 2.4K twinscan.txt.gz 2004-09-01 13:19 731K twinscan.sql 2013-10-01 12:48 1.0K trackDb_pushedout.txt.gz 2021-08-02 14:24 13K trackDb_pushedout.sql 2021-08-02 14:24 2.1K trackDb.txt.gz 2023-03-28 13:48 13K trackDb.sql 2023-03-28 13:48 2.1K tableList.txt.gz 2024-04-21 03:22 2.5K tableList.sql 2024-04-21 03:22 1.6K tableDescriptions.txt.gz 2024-04-20 02:03 4.6K tableDescriptions.sql 2024-04-20 02:03 1.4K simpleRepeat.txt.gz 2004-09-01 13:19 1.4M simpleRepeat.sql 2013-10-01 12:48 1.1K seq.txt.gz 2004-09-01 13:19 213K seq.sql 2013-10-01 12:48 587 rmsk.txt.gz 2004-09-01 13:19 2.3M rmsk.sql 2013-10-01 12:48 1.1K netDm1.txt.gz 2004-09-01 13:19 7.1M netDm1.sql 2013-10-01 12:48 1.3K mrnaOrientInfo.txt.gz 2017-10-22 06:27 2.6K mrnaOrientInfo.sql 2017-10-22 06:27 1.8K microsat.txt.gz 2015-08-23 14:16 9.4K microsat.sql 2015-08-23 14:16 1.5K intronEst.txt.gz 2016-06-05 10:02 1.4M intronEst.sql 2016-06-05 10:02 2.1K history.txt.gz 2004-09-01 13:18 333 history.sql 2013-10-01 12:48 533 hgFindSpec_pushedout.txt.gz 2021-08-02 14:24 638 hgFindSpec_pushedout.sql 2021-08-02 14:24 1.8K hgFindSpec.txt.gz 2023-03-28 13:48 676 hgFindSpec.sql 2023-03-28 13:48 1.8K grp.txt.gz 2014-03-02 03:40 223 grp.sql 2014-03-02 03:40 1.4K genscanPep.txt.gz 2004-09-01 13:18 4.6M genscanPep.sql 2013-10-01 12:48 326 genscan.txt.gz 2005-01-09 04:35 693K genscan.sql 2013-10-01 12:48 744 geneMapper.txt.gz 2006-01-29 08:24 597K geneMapper.sql 2013-10-01 12:48 750 gcPercent.txt.gz 2004-09-01 13:18 36K gcPercent.sql 2013-10-01 12:48 542 gbLoaded.txt.gz 2020-08-21 13:08 43K gbLoaded.sql 2020-08-21 13:08 1.6K gbDelete_tmp.txt.gz 2005-09-27 05:01 180K gbDelete_tmp.sql 2013-10-01 12:48 322 gap.txt.gz 2005-06-23 05:17 82K gap.sql 2013-10-01 12:48 718 extFile.txt.gz 2004-09-01 13:17 74 extFile.sql 2013-10-01 12:48 441 estOrientInfo.txt.gz 2016-06-05 10:02 388K estOrientInfo.sql 2016-06-05 10:02 1.8K chromInfo.txt.gz 2004-09-01 13:17 9.2K chromInfo.sql 2013-10-01 12:48 388 chainDm1Link.txt.gz 2004-09-01 13:17 28M chainDm1Link.sql 2013-10-01 12:48 561 chainDm1.txt.gz 2004-09-01 13:17 2.8M chainDm1.sql 2013-10-01 12:48 838 blastDm1FB.txt.gz 2004-09-01 13:17 1.4M blastDm1FB.sql 2013-10-01 12:48 1.3K bigFiles.txt.gz 2024-04-21 03:22 33 bigFiles.sql 2024-04-21 03:22 1.4K augustusGene.txt.gz 2015-07-26 12:13 749K augustusGene.sql 2015-07-26 12:13 1.9K all_mrna.txt.gz 2017-10-22 06:27 9.2K all_mrna.sql 2017-10-22 06:27 2.1K all_est.txt.gz 2016-06-05 10:02 2.2M all_est.sql 2016-06-05 10:02 2.1K